RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 AKNAQ7Z591 1439 aa29.11■■■□□ 2.25
CLDND1-202ENST00000394180 CROCC2H7BZ55 1655 aa29.1■■■□□ 2.25
CLDND1-202ENST00000394180 NCOA1Q15788 1441 aa29.1■■■□□ 2.25
CLDND1-202ENST00000394180 ABCC1P33527 1531 aa29.1■■■□□ 2.25
CLDND1-202ENST00000394180 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
CLDND1-202ENST00000394180 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
CLDND1-202ENST00000394180 GSE1Q14687 1217 aa29.09■■■□□ 2.25
CLDND1-202ENST00000394180 MRS2Q9HD23 443 aa29.09■■■□□ 2.25
CLDND1-202ENST00000394180 CCDC141Q6ZP82 1450 aa29.09■■■□□ 2.25
CLDND1-202ENST00000394180 TSPY4P0CV99 314 aa29.08■■■□□ 2.25
CLDND1-202ENST00000394180 TSPY10P0CW01 314 aa29.08■■■□□ 2.25
CLDND1-202ENST00000394180 PLEKHH2Q8IVE3 1493 aa29.08■■■□□ 2.25
CLDND1-202ENST00000394180 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
CLDND1-202ENST00000394180 GLI2P10070 1586 aa29.06■■■□□ 2.24
CLDND1-202ENST00000394180 TRAPPC8Q9Y2L5 1435 aa29.06■■■□□ 2.24
CLDND1-202ENST00000394180 POLR1AO95602 1720 aaPredicted RBP29.06■■■□□ 2.24
CLDND1-202ENST00000394180 HSPA5P11021 654 aaKnown RBP29.06■■■□□ 2.24
CLDND1-202ENST00000394180 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
CLDND1-202ENST00000394180 MAP3K4Q9Y6R4 1608 aa29.06■■■□□ 2.24
CLDND1-202ENST00000394180 DDRGK1Q96HY6 314 aa29.05■■■□□ 2.24
CLDND1-202ENST00000394180 AFAP1Q8N556 730 aa29.04■■■□□ 2.24
CLDND1-202ENST00000394180 ROCK1Q13464 1354 aa29.04■■■□□ 2.24
CLDND1-202ENST00000394180 ADGRL1O94910 1474 aa29.04■■■□□ 2.24
CLDND1-202ENST00000394180 CCDC184Q52MB2 194 aa29.04■■■□□ 2.24
CLDND1-202ENST00000394180 RSPH4AQ5TD94 716 aa29.04■■■□□ 2.24
CLDND1-202ENST00000394180 CCDC7Q96M83 1385 aa29.02■■■□□ 2.24
CLDND1-202ENST00000394180 SHANK2Q9UPX8 1470 aa29.02■■■□□ 2.24
CLDND1-202ENST00000394180 SCAPERQ9BY12 1400 aa29.01■■■□□ 2.24
CLDND1-202ENST00000394180 FAM9BQ8IZU0 186 aa29.01■■■□□ 2.24
CLDND1-202ENST00000394180 FAM43AQ8N2R8 423 aa29■■■□□ 2.23
CLDND1-202ENST00000394180 KDM6BO15054 1643 aa29■■■□□ 2.23
CLDND1-202ENST00000394180 ADGRL2O95490 1459 aa28.99■■■□□ 2.23
CLDND1-202ENST00000394180 ADGBQ8N7X0 1667 aa28.98■■■□□ 2.23
CLDND1-202ENST00000394180 GCC2Q8IWJ2 1684 aa28.98■■■□□ 2.23
CLDND1-202ENST00000394180 ANKRD30AQ9BXX3 1397 aa28.98■■■□□ 2.23
CLDND1-202ENST00000394180 TSPOAP1O95153 1857 aa28.98■■■□□ 2.23
CLDND1-202ENST00000394180 KIF13AQ9H1H9 1805 aa28.97■■■□□ 2.23
CLDND1-202ENST00000394180 BACH2Q9BYV9 841 aa28.96■■■□□ 2.23
CLDND1-202ENST00000394180 PDE4AP27815 886 aa28.93■■■□□ 2.22
CLDND1-202ENST00000394180 GLIPR1L2Q4G1C9 344 aa28.93■■■□□ 2.22
CLDND1-202ENST00000394180 PKNOX2Q96KN3 472 aa28.93■■■□□ 2.22
CLDND1-202ENST00000394180 BRPF3Q9ULD4 1205 aa28.93■■■□□ 2.22
CLDND1-202ENST00000394180 CFAP74Q9C0B2 1584 aa28.92■■■□□ 2.22
CLDND1-202ENST00000394180 KIF15Q9NS87 1388 aa28.91■■■□□ 2.22
CLDND1-202ENST00000394180 NEO1Q92859 1461 aa28.91■■■□□ 2.22
CLDND1-202ENST00000394180 SPAG9O60271 1321 aaKnown RBP28.9■■■□□ 2.22
CLDND1-202ENST00000394180 LAS1LQ9Y4W2 734 aaKnown RBP28.9■■■□□ 2.22
CLDND1-202ENST00000394180 EIF5BO60841 1220 aaKnown RBP28.89■■■□□ 2.22
CLDND1-202ENST00000394180 PPRC1Q5VV67 1664 aaKnown RBP28.89■■■□□ 2.22
CLDND1-202ENST00000394180 MAST1Q9Y2H9 1570 aa28.89■■■□□ 2.21
CLDND1-202ENST00000394180 RAPGEF3O95398 923 aa28.87■■■□□ 2.21
CLDND1-202ENST00000394180 ANKRD50Q9ULJ7 1429 aa28.86■■■□□ 2.21
CLDND1-202ENST00000394180 POGZQ7Z3K3 1410 aa28.84■■■□□ 2.21
CLDND1-202ENST00000394180 ZNF518AQ6AHZ1 1483 aa28.83■■■□□ 2.21
CLDND1-202ENST00000394180 ZFYVE16Q7Z3T8 1539 aa28.83■■■□□ 2.21
CLDND1-202ENST00000394180 TRHP20396 242 aaPredicted RBP28.81■■■□□ 2.2
CLDND1-202ENST00000394180 DENND4BO75064 1496 aaPredicted RBP28.79■■■□□ 2.2
CLDND1-202ENST00000394180 PLXNC1O60486 1568 aa28.79■■■□□ 2.2
CLDND1-202ENST00000394180 NFKBIBQ15653 356 aa28.79■■■□□ 2.2
CLDND1-202ENST00000394180 ATP7AQ04656 1500 aa28.78■■■□□ 2.2
CLDND1-202ENST00000394180 TEX14Q8IWB6 1497 aa28.78■■■□□ 2.2
CLDND1-202ENST00000394180 RTEL1-TNFRSF6BF6WH68 1400 aa28.78■■■□□ 2.2
CLDND1-202ENST00000394180 INO80Q9ULG1 1556 aaPredicted RBP28.77■■■□□ 2.2
CLDND1-202ENST00000394180 NPM2Q86SE8 214 aaKnown RBP28.76■■■□□ 2.19
CLDND1-202ENST00000394180 SPATA31E1Q6ZUB1 1445 aa28.75■■■□□ 2.19
CLDND1-202ENST00000394180 KDM5CP41229 1560 aa28.75■■■□□ 2.19
CLDND1-202ENST00000394180 FRAT1Q92837 279 aaPredicted RBP28.74■■■□□ 2.19
CLDND1-202ENST00000394180 KIDINS220Q9ULH0 1771 aa28.73■■■□□ 2.19
CLDND1-202ENST00000394180 RICTORQ6R327 1708 aa28.72■■■□□ 2.19
CLDND1-202ENST00000394180 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
CLDND1-202ENST00000394180 RRP1P56182 461 aaKnown RBP28.7■■■□□ 2.18
CLDND1-202ENST00000394180 ARID4BQ4LE39 1312 aaPredicted RBP28.68■■■□□ 2.18
CLDND1-202ENST00000394180 FRMPD1Q5SYB0 1578 aa28.68■■■□□ 2.18
CLDND1-202ENST00000394180 MLH3Q9UHC1 1453 aa28.67■■■□□ 2.18
CLDND1-202ENST00000394180 COL17A1Q9UMD9 1497 aaPredicted RBP28.67■■■□□ 2.18
CLDND1-202ENST00000394180 MPHOSPH9Q99550 1183 aa28.67■■■□□ 2.18
CLDND1-202ENST00000394180 HECW2Q9P2P5 1572 aa28.67■■■□□ 2.18
CLDND1-202ENST00000394180 DHX29Q7Z478 1369 aaKnown RBP28.67■■■□□ 2.18
CLDND1-202ENST00000394180 KIF7Q2M1P5 1343 aa28.67■■■□□ 2.18
CLDND1-202ENST00000394180 FOXD1Q16676 465 aa28.65■■■□□ 2.18
CLDND1-202ENST00000394180 NUP155O75694 1391 aa28.64■■■□□ 2.18
CLDND1-202ENST00000394180 ERBINQ96RT1 1412 aa28.64■■■□□ 2.17
CLDND1-202ENST00000394180 SLC4A1APQ9BWU0 796 aaKnown RBP28.63■■■□□ 2.17
CLDND1-202ENST00000394180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.63■■■□□ 2.17
CLDND1-202ENST00000394180 LRPPRCP42704 1394 aaKnown RBP28.61■■■□□ 2.17
CLDND1-202ENST00000394180 PZPP20742 1482 aa28.61■■■□□ 2.17
CLDND1-202ENST00000394180 KTN1Q86UP2 1357 aaKnown RBP28.61■■■□□ 2.17
CLDND1-202ENST00000394180 YEATS2Q9ULM3 1422 aa28.6■■■□□ 2.17
CLDND1-202ENST00000394180 ABCA6Q8N139 1617 aa28.6■■■□□ 2.17
CLDND1-202ENST00000394180 PDE3BQ13370 1112 aa28.59■■■□□ 2.17
CLDND1-202ENST00000394180 PNISRQ8TF01 805 aaKnown RBP28.59■■■□□ 2.17
CLDND1-202ENST00000394180 A2MP01023 1474 aa28.56■■■□□ 2.16
CLDND1-202ENST00000394180 KIF3BO15066 747 aa28.56■■■□□ 2.16
CLDND1-202ENST00000394180 DAXXQ9UER7 740 aaPredicted RBP28.56■■■□□ 2.16
CLDND1-202ENST00000394180 EXOC6Q8TAG9 804 aa28.55■■■□□ 2.16
CLDND1-202ENST00000394180 RPRD2Q5VT52 1461 aaKnown RBP28.54■■■□□ 2.16
CLDND1-202ENST00000394180 ROCK2O75116 1388 aaKnown RBP28.53■■■□□ 2.16
CLDND1-202ENST00000394180 DIP2CQ9Y2E4 1556 aa28.53■■■□□ 2.16
CLDND1-202ENST00000394180 ZMYM4Q5VZL5 1548 aa28.53■■■□□ 2.16
CLDND1-202ENST00000394180 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms