RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 KCNA4P22459 653 aa10.25□□□□□ -0.77
UBBP1-201ENST00000392399 C1QBPQ07021 282 aaKnown RBP10.25□□□□□ -0.77
UBBP1-201ENST00000392399 MLECQ14165 292 aa10.25□□□□□ -0.77
UBBP1-201ENST00000392399 RRP7BPQ9NSQ0 103 aa10.25□□□□□ -0.77
UBBP1-201ENST00000392399 ROCK1Q13464 1354 aa10.25□□□□□ -0.77
UBBP1-201ENST00000392399 KIF15Q9NS87 1388 aa10.25□□□□□ -0.77
UBBP1-201ENST00000392399 DUOX2Q9NRD8 1548 aa10.24□□□□□ -0.77
UBBP1-201ENST00000392399 PLXNC1O60486 1568 aa10.24□□□□□ -0.77
UBBP1-201ENST00000392399 KIF3BO15066 747 aa10.24□□□□□ -0.77
UBBP1-201ENST00000392399 ESF1Q9H501 851 aaKnown RBP10.24□□□□□ -0.77
UBBP1-201ENST00000392399 CROCC2H7BZ55 1655 aa10.23□□□□□ -0.77
UBBP1-201ENST00000392399 ITGAEP38570 1179 aa10.23□□□□□ -0.77
UBBP1-201ENST00000392399 GGT6Q6P531 493 aa10.23□□□□□ -0.77
UBBP1-201ENST00000392399 BCORL1Q5H9F3 1711 aa10.23□□□□□ -0.77
UBBP1-201ENST00000392399 PTPRKQ15262 1439 aa10.23□□□□□ -0.77
UBBP1-201ENST00000392399 ERBINQ96RT1 1412 aa10.22□□□□□ -0.77
UBBP1-201ENST00000392399 CNTLNQ9NXG0 1405 aa10.21□□□□□ -0.78
UBBP1-201ENST00000392399 ADAMTSL3P82987 1691 aa10.21□□□□□ -0.78
UBBP1-201ENST00000392399 SIGLEC1Q9BZZ2 1709 aa10.2□□□□□ -0.78
UBBP1-201ENST00000392399 ANKRD50Q9ULJ7 1429 aa10.19□□□□□ -0.78
UBBP1-201ENST00000392399 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
UBBP1-201ENST00000392399 WASHC2CQ9Y4E1 1318 aa10.18□□□□□ -0.78
UBBP1-201ENST00000392399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBBP1-201ENST00000392399 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
UBBP1-201ENST00000392399 PTPRMP28827 1452 aa10.17□□□□□ -0.78
UBBP1-201ENST00000392399 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
UBBP1-201ENST00000392399 ZMYM3Q14202 1370 aa10.16□□□□□ -0.78
UBBP1-201ENST00000392399 KANK1Q14678 1352 aa10.16□□□□□ -0.78
UBBP1-201ENST00000392399 MADDQ8WXG6 1647 aa10.16□□□□□ -0.78
UBBP1-201ENST00000392399 HFM1A2PYH4 1435 aa10.15□□□□□ -0.79
UBBP1-201ENST00000392399 RNF17Q9BXT8 1623 aaKnown RBP10.15□□□□□ -0.79
UBBP1-201ENST00000392399 NAIPQ13075 1403 aa10.14□□□□□ -0.79
UBBP1-201ENST00000392399 FER1L4A9Z1Z3 1794 aa10.14□□□□□ -0.79
UBBP1-201ENST00000392399 KDM5DQ9BY66 1539 aa10.13□□□□□ -0.79
UBBP1-201ENST00000392399 RIMS1Q86UR5 1692 aaKnown RBP10.12□□□□□ -0.79
UBBP1-201ENST00000392399 CEBPAP49715 358 aaPredicted RBP10.12□□□□□ -0.79
UBBP1-201ENST00000392399 PRDM15P57071 1507 aaPredicted RBP10.12□□□□□ -0.79
UBBP1-201ENST00000392399 MROH2AA6NES4 1674 aa10.12□□□□□ -0.79
UBBP1-201ENST00000392399 DEPDC5O75140 1603 aa10.11□□□□□ -0.79
UBBP1-201ENST00000392399 NPATQ14207 1427 aa10.11□□□□□ -0.79
UBBP1-201ENST00000392399 HRCP23327 699 aa10.11□□□□□ -0.79
UBBP1-201ENST00000392399 SETD1BQ9UPS6 1966 aaKnown RBP10.1□□□□□ -0.79
UBBP1-201ENST00000392399 ARHGAP31Q2M1Z3 1444 aa10.1□□□□□ -0.79
UBBP1-201ENST00000392399 ABCC3O15438 1527 aa10.1□□□□□ -0.79
UBBP1-201ENST00000392399 LMTK2Q8IWU2 1503 aa10.1□□□□□ -0.79
UBBP1-201ENST00000392399 NUP155O75694 1391 aa10.1□□□□□ -0.79
UBBP1-201ENST00000392399 MROH1Q8NDA8 1641 aa10.1□□□□□ -0.79
UBBP1-201ENST00000392399 CLTCQ00610 1675 aaKnown RBP10.09□□□□□ -0.79
UBBP1-201ENST00000392399 ZC3H13Q5T200 1668 aaKnown RBP10.09□□□□□ -0.79
UBBP1-201ENST00000392399 SETD5Q9C0A6 1442 aa10.09□□□□□ -0.79
UBBP1-201ENST00000392399 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
UBBP1-201ENST00000392399 PZPP20742 1482 aa10.09□□□□□ -0.79
UBBP1-201ENST00000392399 VWDEQ8N2E2 1590 aa10.09□□□□□ -0.79
UBBP1-201ENST00000392399 C3P01024 1663 aa10.07□□□□□ -0.8
UBBP1-201ENST00000392399 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
UBBP1-201ENST00000392399 UNC13BO14795 1591 aa10.07□□□□□ -0.8
UBBP1-201ENST00000392399 FBXO31Q5XUX0 539 aaPredicted RBP10.07□□□□□ -0.8
UBBP1-201ENST00000392399 TRIM52Q96A61 297 aa10.07□□□□□ -0.8
UBBP1-201ENST00000392399 UHRF1BP1Q6BDS2 1440 aa10.06□□□□□ -0.8
UBBP1-201ENST00000392399 RPRD2Q5VT52 1461 aaKnown RBP10.05□□□□□ -0.8
UBBP1-201ENST00000392399 TNRQ92752 1358 aa10.05□□□□□ -0.8
UBBP1-201ENST00000392399 SLC4A1APQ9BWU0 796 aaKnown RBP10.04□□□□□ -0.8
UBBP1-201ENST00000392399 SLC52A1Q9NWF4 448 aa10.04□□□□□ -0.8
UBBP1-201ENST00000392399 CAMSAP1Q5T5Y3 1602 aa10.04□□□□□ -0.8
UBBP1-201ENST00000392399 IQGAP3Q86VI3 1631 aa10.04□□□□□ -0.8
UBBP1-201ENST00000392399 RAB3GAP2Q9H2M9 1393 aa10.03□□□□□ -0.8
UBBP1-201ENST00000392399 EFCAB6Q5THR3 1501 aa10.03□□□□□ -0.8
UBBP1-201ENST00000392399 CEP152O94986 1710 aa10.03□□□□□ -0.8
UBBP1-201ENST00000392399 ERVK-7P63135 1459 aa10.03□□□□□ -0.8
UBBP1-201ENST00000392399 NLRP1Q9C000 1473 aa10.03□□□□□ -0.8
UBBP1-201ENST00000392399 TET3O43151 1660 aa10.02□□□□□ -0.8
UBBP1-201ENST00000392399 SPATA31D1Q6ZQQ2 1576 aa10.02□□□□□ -0.81
UBBP1-201ENST00000392399 MPHOSPH9Q99550 1183 aa10.02□□□□□ -0.81
UBBP1-201ENST00000392399 NOS1P29475 1434 aa10.01□□□□□ -0.81
UBBP1-201ENST00000392399 PKD2Q13563 968 aa10.01□□□□□ -0.81
UBBP1-201ENST00000392399 THEMISQ8N1K5 641 aaPredicted RBP10.01□□□□□ -0.81
UBBP1-201ENST00000392399 LMTK3Q96Q04 1460 aa10.01□□□□□ -0.81
UBBP1-201ENST00000392399 PREX1Q8TCU6 1659 aa10.01□□□□□ -0.81
UBBP1-201ENST00000392399 A2ML1A8K2U0 1454 aa9.99□□□□□ -0.81
UBBP1-201ENST00000392399 IDI1Q13907 227 aa9.99□□□□□ -0.81
UBBP1-201ENST00000392399 PTPRTO14522 1441 aa9.99□□□□□ -0.81
UBBP1-201ENST00000392399 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
UBBP1-201ENST00000392399 U3KPZ7 1027 aaPredicted RBP9.98□□□□□ -0.81
UBBP1-201ENST00000392399 CFAP65Q6ZU64 1925 aaKnown RBP9.97□□□□□ -0.81
UBBP1-201ENST00000392399 HSPA2P54652 639 aa9.97□□□□□ -0.81
UBBP1-201ENST00000392399 UGGT1Q9NYU2 1555 aa9.97□□□□□ -0.81
UBBP1-201ENST00000392399 CEP170BQ9Y4F5 1589 aaPredicted RBP9.97□□□□□ -0.81
UBBP1-201ENST00000392399 MYO3AQ8NEV4 1616 aa9.96□□□□□ -0.81
UBBP1-201ENST00000392399 E9PCH4 1651 aa9.96□□□□□ -0.81
UBBP1-201ENST00000392399 HDGFP51858 240 aaKnown RBP9.96□□□□□ -0.82
UBBP1-201ENST00000392399 ANKLE2Q86XL3 938 aa9.95□□□□□ -0.82
UBBP1-201ENST00000392399 PLA2R1Q13018 1463 aa9.95□□□□□ -0.82
UBBP1-201ENST00000392399 ZNF142P52746 1687 aaPredicted RBP9.95□□□□□ -0.82
UBBP1-201ENST00000392399 SYNMO15061 1565 aa9.94□□□□□ -0.82
UBBP1-201ENST00000392399 SLC4A2P04920 1241 aa9.93□□□□□ -0.82
UBBP1-201ENST00000392399 EID1Q9Y6B2 187 aa9.93□□□□□ -0.82
UBBP1-201ENST00000392399 KDM5AP29375 1690 aaKnown RBP9.93□□□□□ -0.82
UBBP1-201ENST00000392399 TRPM2O94759 1503 aa9.92□□□□□ -0.82
UBBP1-201ENST00000392399 CHGAP10645 457 aaKnown RBP9.92□□□□□ -0.82
UBBP1-201ENST00000392399 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms