RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 RTF1Q92541 710 aaKnown RBP17■□□□□ 0.31
PTPRN2-202ENST00000389416 EVC2Q86UK5 1308 aa17■□□□□ 0.31
PTPRN2-202ENST00000389416 PCF11O94913 1555 aaKnown RBP16.99■□□□□ 0.31
PTPRN2-202ENST00000389416 CCDC146Q8IYE0 955 aa16.98■□□□□ 0.31
PTPRN2-202ENST00000389416 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
PTPRN2-202ENST00000389416 LTV1Q96GA3 475 aaPredicted RBP16.97■□□□□ 0.31
PTPRN2-202ENST00000389416 PLEKHH2Q8IVE3 1493 aa16.96■□□□□ 0.31
PTPRN2-202ENST00000389416 DAPK1P53355 1430 aa16.96■□□□□ 0.31
PTPRN2-202ENST00000389416 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
PTPRN2-202ENST00000389416 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
PTPRN2-202ENST00000389416 AMPHP49418 695 aa16.95■□□□□ 0.3
PTPRN2-202ENST00000389416 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-202ENST00000389416 CENPJQ9HC77 1338 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-202ENST00000389416 RGS3P49796 1198 aa16.94■□□□□ 0.3
PTPRN2-202ENST00000389416 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTPRN2-202ENST00000389416 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
PTPRN2-202ENST00000389416 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
PTPRN2-202ENST00000389416 STAC3Q96MF2 364 aa16.93■□□□□ 0.3
PTPRN2-202ENST00000389416 CD109Q6YHK3 1445 aa16.92■□□□□ 0.3
PTPRN2-202ENST00000389416 SUPT6HQ7KZ85 1726 aaKnown RBP16.92■□□□□ 0.3
PTPRN2-202ENST00000389416 CGNL1Q0VF96 1302 aa16.9■□□□□ 0.3
PTPRN2-202ENST00000389416 KIF7Q2M1P5 1343 aa16.9■□□□□ 0.3
PTPRN2-202ENST00000389416 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
PTPRN2-202ENST00000389416 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
PTPRN2-202ENST00000389416 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
PTPRN2-202ENST00000389416 NAIPQ13075 1403 aa16.89■□□□□ 0.29
PTPRN2-202ENST00000389416 RRP7AQ9Y3A4 280 aaKnown RBP16.89■□□□□ 0.29
PTPRN2-202ENST00000389416 KIAA1107Q9UPP5 1409 aa16.89■□□□□ 0.29
PTPRN2-202ENST00000389416 MS4A1P11836 297 aa16.88■□□□□ 0.29
PTPRN2-202ENST00000389416 COG3Q96JB2 828 aa16.88■□□□□ 0.29
PTPRN2-202ENST00000389416 RCAN3Q9UKA8 241 aa16.87■□□□□ 0.29
PTPRN2-202ENST00000389416 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
PTPRN2-202ENST00000389416 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
PTPRN2-202ENST00000389416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.86■□□□□ 0.299e-7■■■■■ 147.6
PTPRN2-202ENST00000389416 NPHP1O15259 732 aa16.85■□□□□ 0.29
PTPRN2-202ENST00000389416 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
PTPRN2-202ENST00000389416 CCDC7Q96M83 1385 aa16.85■□□□□ 0.29
PTPRN2-202ENST00000389416 SLC52A1Q9NWF4 448 aa16.84■□□□□ 0.29
PTPRN2-202ENST00000389416 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
PTPRN2-202ENST00000389416 ABCC5O15440 1437 aa16.83■□□□□ 0.29
PTPRN2-202ENST00000389416 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.29
PTPRN2-202ENST00000389416 CHMP4BQ9H444 224 aaKnown RBP16.83■□□□□ 0.28
PTPRN2-202ENST00000389416 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
PTPRN2-202ENST00000389416 OS9Q13438 667 aaPredicted RBP16.82■□□□□ 0.28
PTPRN2-202ENST00000389416 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
PTPRN2-202ENST00000389416 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
PTPRN2-202ENST00000389416 PSME1Q06323 249 aa16.81■□□□□ 0.28
PTPRN2-202ENST00000389416 GGNBP2Q9H3C7 697 aa16.81■□□□□ 0.28
PTPRN2-202ENST00000389416 ROCK1Q13464 1354 aa16.8■□□□□ 0.28
PTPRN2-202ENST00000389416 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
PTPRN2-202ENST00000389416 SLC26A8Q96RN1 970 aa16.8■□□□□ 0.28
PTPRN2-202ENST00000389416 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
PTPRN2-202ENST00000389416 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
PTPRN2-202ENST00000389416 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
PTPRN2-202ENST00000389416 THEMISQ8N1K5 641 aaPredicted RBP16.78■□□□□ 0.28
PTPRN2-202ENST00000389416 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
PTPRN2-202ENST00000389416 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
PTPRN2-202ENST00000389416 APAF1O14727 1248 aa16.78■□□□□ 0.28
PTPRN2-202ENST00000389416 ELL2O00472 640 aaPredicted RBP16.77■□□□□ 0.28
PTPRN2-202ENST00000389416 SMC4Q9NTJ3 1288 aa16.77■□□□□ 0.28
PTPRN2-202ENST00000389416 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.27
PTPRN2-202ENST00000389416 ATP10BO94823 1461 aa16.77■□□□□ 0.27
PTPRN2-202ENST00000389416 KIF14Q15058 1648 aa16.77■□□□□ 0.27
PTPRN2-202ENST00000389416 APBB1O00213 710 aa16.76■□□□□ 0.27
PTPRN2-202ENST00000389416 NUTM2GQ5VZR2 741 aa16.76■□□□□ 0.27
PTPRN2-202ENST00000389416 NCOA1Q15788 1441 aa16.76■□□□□ 0.27
PTPRN2-202ENST00000389416 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
PTPRN2-202ENST00000389416 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
PTPRN2-202ENST00000389416 NBR1Q14596 966 aa16.75■□□□□ 0.27
PTPRN2-202ENST00000389416 STK31Q9BXU1 1019 aa16.74■□□□□ 0.27
PTPRN2-202ENST00000389416 ATF3P18847 181 aa16.74■□□□□ 0.27
PTPRN2-202ENST00000389416 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
PTPRN2-202ENST00000389416 PDE3BQ13370 1112 aa16.73■□□□□ 0.27
PTPRN2-202ENST00000389416 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
PTPRN2-202ENST00000389416 LMOD3Q0VAK6 560 aa16.73■□□□□ 0.27
PTPRN2-202ENST00000389416 FANCAO15360 1455 aa16.73■□□□□ 0.27
PTPRN2-202ENST00000389416 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
PTPRN2-202ENST00000389416 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
PTPRN2-202ENST00000389416 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
PTPRN2-202ENST00000389416 NUP153P49790 1475 aaKnown RBP16.72■□□□□ 0.27
PTPRN2-202ENST00000389416 PROSER2Q86WR7 435 aaPredicted RBP16.72■□□□□ 0.27
PTPRN2-202ENST00000389416 AKNAQ7Z591 1439 aa16.72■□□□□ 0.27
PTPRN2-202ENST00000389416 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
PTPRN2-202ENST00000389416 PMFBP1Q8TBY8 1022 aa16.71■□□□□ 0.27
PTPRN2-202ENST00000389416 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
PTPRN2-202ENST00000389416 NLRP6P59044 892 aa16.7■□□□□ 0.26
PTPRN2-202ENST00000389416 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
PTPRN2-202ENST00000389416 SLC4A10Q6U841 1118 aa16.7■□□□□ 0.26
PTPRN2-202ENST00000389416 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
PTPRN2-202ENST00000389416 POGZQ7Z3K3 1410 aa16.69■□□□□ 0.26
PTPRN2-202ENST00000389416 EVA1CP58658 441 aa16.69■□□□□ 0.26
PTPRN2-202ENST00000389416 BECN1Q14457 450 aa16.69■□□□□ 0.26
PTPRN2-202ENST00000389416 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
PTPRN2-202ENST00000389416 ASXL2Q76L83 1435 aa16.68■□□□□ 0.26
PTPRN2-202ENST00000389416 CNTLNQ9NXG0 1405 aa16.68■□□□□ 0.26
PTPRN2-202ENST00000389416 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
PTPRN2-202ENST00000389416 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
PTPRN2-202ENST00000389416 HMOX1P09601 288 aa16.67■□□□□ 0.26
PTPRN2-202ENST00000389416 MTHFSP49914 203 aa16.67■□□□□ 0.26
PTPRN2-202ENST00000389416 IDI1Q13907 227 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms