RNA–Protein interactions for RNA: ENST00000382254.5

CDH12-201, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH12, Length 4,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-201ENST00000382254 FRAT2O75474 233 aaPredicted RBP9.38□□□□□ -0.91
CDH12-201ENST00000382254 GBP4Q96PP9 640 aa9.38□□□□□ -0.91
CDH12-201ENST00000382254 APAF1O14727 1248 aa9.38□□□□□ -0.91
CDH12-201ENST00000382254 FOXD4L1Q9NU39 408 aa9.38□□□□□ -0.91
CDH12-201ENST00000382254 POLA1P09884 1462 aaPredicted RBP9.38□□□□□ -0.91
CDH12-201ENST00000382254 U2AF1L5P0DN76 240 aaPredicted RBP9.38□□□□□ -0.91
CDH12-201ENST00000382254 U2AF1Q01081 240 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDH12-201ENST00000382254 ITPRIPQ8IWB1 547 aa9.38□□□□□ -0.91
CDH12-201ENST00000382254 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
CDH12-201ENST00000382254 SMG6Q86US8 1419 aaKnown RBP9.37□□□□□ -0.91
CDH12-201ENST00000382254 ZBTB7CA1YPR0 619 aa9.37□□□□□ -0.91
CDH12-201ENST00000382254 HMGXB3Q12766 1538 aa9.37□□□□□ -0.91
CDH12-201ENST00000382254 HSP90AA2PQ14568 343 aaPredicted RBP9.37□□□□□ -0.91
CDH12-201ENST00000382254 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
CDH12-201ENST00000382254 JPH4Q96JJ6 628 aa9.37□□□□□ -0.91
CDH12-201ENST00000382254 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDH12-201ENST00000382254 SKAP1Q86WV1 359 aa9.36□□□□□ -0.91
CDH12-201ENST00000382254 PTPRKQ15262 1439 aa9.36□□□□□ -0.91
CDH12-201ENST00000382254 PLEKHG5O94827 1062 aa9.36□□□□□ -0.91
CDH12-201ENST00000382254 CASC1Q6TDU7 716 aa9.36□□□□□ -0.91
CDH12-201ENST00000382254 BIVM-ERCC5R4GMW8 1640 aa9.36□□□□□ -0.91
CDH12-201ENST00000382254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDH12-201ENST00000382254 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH12-201ENST00000382254 BRD4O60885 1362 aaPredicted RBP9.35□□□□□ -0.91
CDH12-201ENST00000382254 SMC4Q9NTJ3 1288 aa9.35□□□□□ -0.91
CDH12-201ENST00000382254 TOPBP1Q92547 1522 aa9.34□□□□□ -0.91
CDH12-201ENST00000382254 MAP3K1Q13233 1512 aa9.34□□□□□ -0.91
CDH12-201ENST00000382254 CGNL1Q0VF96 1302 aa9.34□□□□□ -0.91
CDH12-201ENST00000382254 EFCAB5A4FU69 1503 aa9.34□□□□□ -0.91
CDH12-201ENST00000382254 APBB1O00213 710 aa9.34□□□□□ -0.91
CDH12-201ENST00000382254 ADAMTS8Q9UP79 889 aa9.34□□□□□ -0.91
CDH12-201ENST00000382254 ERCC6Q03468 1493 aa9.33□□□□□ -0.92
CDH12-201ENST00000382254 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
CDH12-201ENST00000382254 E9PSI1 815 aa9.33□□□□□ -0.92
CDH12-201ENST00000382254 CHMP4BQ9H444 224 aaKnown RBP9.33□□□□□ -0.92
CDH12-201ENST00000382254 CCDC144AA2RUR9 1427 aa9.32□□□□□ -0.92
CDH12-201ENST00000382254 NPM1P06748 294 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH12-201ENST00000382254 IPO8O15397 1037 aaKnown RBP9.32□□□□□ -0.92
CDH12-201ENST00000382254 NBPF1Q3BBV0 1214 aa9.31□□□□□ -0.92
CDH12-201ENST00000382254 POGKQ9P215 609 aa9.31□□□□□ -0.92
CDH12-201ENST00000382254 DNAJC5BQ9UF47 199 aa9.31□□□□□ -0.92
CDH12-201ENST00000382254 PANK1Q8TE04 598 aa9.31□□□□□ -0.92
CDH12-201ENST00000382254 ANKRD50Q9ULJ7 1429 aa9.3□□□□□ -0.92
CDH12-201ENST00000382254 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
CDH12-201ENST00000382254 CDK13Q14004 1512 aaKnown RBP9.3□□□□□ -0.92
CDH12-201ENST00000382254 DDX11L8A8MPP1 907 aa9.3□□□□□ -0.92
CDH12-201ENST00000382254 CALD1Q05682 793 aaKnown RBP9.29□□□□□ -0.92
CDH12-201ENST00000382254 EHBP1L1Q8N3D4 1523 aa9.29□□□□□ -0.92
CDH12-201ENST00000382254 ANKRD30BQ9BXX2 1392 aa9.29□□□□□ -0.92
CDH12-201ENST00000382254 CHMP5Q9NZZ3 219 aa9.29□□□□□ -0.92
CDH12-201ENST00000382254 ESF1Q9H501 851 aaKnown RBP9.28□□□□□ -0.92
CDH12-201ENST00000382254 PTMSP20962 102 aa9.28□□□□□ -0.92
CDH12-201ENST00000382254 DDX49Q9Y6V7 483 aaKnown RBP9.28□□□□□ -0.92
CDH12-201ENST00000382254 PRG4Q92954 1404 aaPredicted RBP9.28□□□□□ -0.92
CDH12-201ENST00000382254 ABCA10Q8WWZ4 1543 aa9.28□□□□□ -0.92
CDH12-201ENST00000382254 PTPN23Q9H3S7 1636 aa9.28□□□□□ -0.92
CDH12-201ENST00000382254 NCOA1Q15788 1441 aa9.27□□□□□ -0.92
CDH12-201ENST00000382254 PRDM2Q13029 1718 aa9.27□□□□□ -0.93
CDH12-201ENST00000382254 STK26Q9P289 416 aa9.27□□□□□ -0.93
CDH12-201ENST00000382254 MIA2Q96PC5 1412 aa9.27□□□□□ -0.93
CDH12-201ENST00000382254 DAPK1P53355 1430 aa9.27□□□□□ -0.93
CDH12-201ENST00000382254 ZKSCAN2Q63HK3 967 aa9.27□□□□□ -0.93
CDH12-201ENST00000382254 PLPPR3Q6T4P5 718 aa9.27□□□□□ -0.93
CDH12-201ENST00000382254 BCAR3O75815 825 aa9.26□□□□□ -0.93
CDH12-201ENST00000382254 SUPT6HQ7KZ85 1726 aaKnown RBP9.26□□□□□ -0.93
CDH12-201ENST00000382254 KANK1Q14678 1352 aa9.26□□□□□ -0.93
CDH12-201ENST00000382254 C20orf194Q5TEA3 1177 aa9.26□□□□□ -0.93
CDH12-201ENST00000382254 FAM43AQ8N2R8 423 aa9.26□□□□□ -0.93
CDH12-201ENST00000382254 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
CDH12-201ENST00000382254 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
CDH12-201ENST00000382254 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
CDH12-201ENST00000382254 TRAK1Q9UPV9 953 aa9.25□□□□□ -0.93
CDH12-201ENST00000382254 KIAA1107Q9UPP5 1409 aa9.25□□□□□ -0.93
CDH12-201ENST00000382254 EIF3AQ14152 1382 aaKnown RBP9.25□□□□□ -0.93
CDH12-201ENST00000382254 UBE2Q2Q8WVN8 375 aa9.25□□□□□ -0.93
CDH12-201ENST00000382254 C22orf23Q9BZE7 217 aa9.25□□□□□ -0.93
CDH12-201ENST00000382254 KIF3BO15066 747 aa9.25□□□□□ -0.93
CDH12-201ENST00000382254 ANKRD45Q5TZF3 282 aa9.25□□□□□ -0.93
CDH12-201ENST00000382254 DNMBPQ6XZF7 1577 aa9.25□□□□□ -0.93
CDH12-201ENST00000382254 EFCAB2Q5VUJ9 269 aa9.24□□□□□ -0.93
CDH12-201ENST00000382254 ELL2O00472 640 aaPredicted RBP9.24□□□□□ -0.93
CDH12-201ENST00000382254 TRAK2O60296 914 aa9.24□□□□□ -0.93
CDH12-201ENST00000382254 CHAF1AQ13111 956 aaPredicted RBP9.24□□□□□ -0.93
CDH12-201ENST00000382254 GGT6Q6P531 493 aa9.24□□□□□ -0.93
CDH12-201ENST00000382254 NOL8Q76FK4 1167 aaKnown RBP9.24□□□□□ -0.93
CDH12-201ENST00000382254 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
CDH12-201ENST00000382254 KIAA2012Q0VF49 1180 aa9.23□□□□□ -0.93
CDH12-201ENST00000382254 CC2D2AQ9P2K1 1620 aa9.23□□□□□ -0.93
CDH12-201ENST00000382254 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
CDH12-201ENST00000382254 DZIP1LQ8IYY4 767 aaKnown RBP9.23□□□□□ -0.93
CDH12-201ENST00000382254 NUTM2DQ5VT03 806 aaPredicted RBP9.23□□□□□ -0.93
CDH12-201ENST00000382254 MCCP23508 829 aa9.23□□□□□ -0.93
CDH12-201ENST00000382254 LNPKQ9C0E8 428 aa9.23□□□□□ -0.93
CDH12-201ENST00000382254 PODXL2Q9NZ53 605 aa9.23□□□□□ -0.93
CDH12-201ENST00000382254 ABCC5O15440 1437 aa9.22□□□□□ -0.93
CDH12-201ENST00000382254 SOX12O15370 315 aa9.22□□□□□ -0.93
CDH12-201ENST00000382254 MRE11P49959 708 aa9.22□□□□□ -0.93
CDH12-201ENST00000382254 SKOR2Q2VWA4 1001 aaPredicted RBP9.22□□□□□ -0.93
CDH12-201ENST00000382254 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
CDH12-201ENST00000382254 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms