RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
TUSC3-201ENST00000382020 ZBTB7CA1YPR0 619 aa19.1■□□□□ 0.65
TUSC3-201ENST00000382020 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
TUSC3-201ENST00000382020 MFAP1P55081 439 aaKnown RBP19.08■□□□□ 0.64
TUSC3-201ENST00000382020 HSP90AA2PQ14568 343 aaPredicted RBP19.08■□□□□ 0.64
TUSC3-201ENST00000382020 FAM161AQ3B820 660 aa19.08■□□□□ 0.64
TUSC3-201ENST00000382020 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
TUSC3-201ENST00000382020 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
TUSC3-201ENST00000382020 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
TUSC3-201ENST00000382020 NCLP19338 710 aaKnown RBP19.05■□□□□ 0.64
TUSC3-201ENST00000382020 ANKRD50Q9ULJ7 1429 aa19.04■□□□□ 0.64
TUSC3-201ENST00000382020 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
TUSC3-201ENST00000382020 MORC1Q86VD1 984 aa19.03■□□□□ 0.64
TUSC3-201ENST00000382020 TRIM44Q96DX7 344 aaPredicted RBP19.03■□□□□ 0.64
TUSC3-201ENST00000382020 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
TUSC3-201ENST00000382020 POGKQ9P215 609 aa19.02■□□□□ 0.64
TUSC3-201ENST00000382020 CENPQQ7L2Z9 268 aaPredicted RBP19.02■□□□□ 0.63
TUSC3-201ENST00000382020 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
TUSC3-201ENST00000382020 MS4A1P11836 297 aa19.01■□□□□ 0.63
TUSC3-201ENST00000382020 DAPK1P53355 1430 aa19.01■□□□□ 0.63
TUSC3-201ENST00000382020 APBB1O00213 710 aa19.01■□□□□ 0.63
TUSC3-201ENST00000382020 U2AF1L5P0DN76 240 aaPredicted RBP19■□□□□ 0.63
TUSC3-201ENST00000382020 U2AF1Q01081 240 aaKnown RBP eCLIP19■□□□□ 0.63
TUSC3-201ENST00000382020 STK26Q9P289 416 aa19■□□□□ 0.63
TUSC3-201ENST00000382020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19■□□□□ 0.63
TUSC3-201ENST00000382020 PLEKHG5O94827 1062 aa19■□□□□ 0.63
TUSC3-201ENST00000382020 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
TUSC3-201ENST00000382020 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
TUSC3-201ENST00000382020 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
TUSC3-201ENST00000382020 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
TUSC3-201ENST00000382020 ABCC5O15440 1437 aa18.97■□□□□ 0.63
TUSC3-201ENST00000382020 CENPJQ9HC77 1338 aaPredicted RBP18.97■□□□□ 0.63
TUSC3-201ENST00000382020 EPRSP07814 1512 aaKnown RBP18.97■□□□□ 0.63
TUSC3-201ENST00000382020 L1TD1Q5T7N2 865 aaKnown RBP18.96■□□□□ 0.63
TUSC3-201ENST00000382020 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
TUSC3-201ENST00000382020 ITPRIPQ8IWB1 547 aa18.95■□□□□ 0.62
TUSC3-201ENST00000382020 FAM43AQ8N2R8 423 aa18.95■□□□□ 0.62
TUSC3-201ENST00000382020 CDCA8Q53HL2 280 aa18.95■□□□□ 0.62
TUSC3-201ENST00000382020 EFCAB5A4FU69 1503 aa18.94■□□□□ 0.62
TUSC3-201ENST00000382020 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
TUSC3-201ENST00000382020 SUPT6HQ7KZ85 1726 aaKnown RBP18.94■□□□□ 0.62
TUSC3-201ENST00000382020 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
TUSC3-201ENST00000382020 EHBP1L1Q8N3D4 1523 aa18.94■□□□□ 0.62
TUSC3-201ENST00000382020 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
TUSC3-201ENST00000382020 RPRD2Q5VT52 1461 aaKnown RBP18.94■□□□□ 0.62
TUSC3-201ENST00000382020 GGT6Q6P531 493 aa18.94■□□□□ 0.62
TUSC3-201ENST00000382020 ZMYND15Q9H091 742 aa18.93■□□□□ 0.62
TUSC3-201ENST00000382020 GOLGA6L3A6NEY3 463 aa18.93■□□□□ 0.62
TUSC3-201ENST00000382020 KIF3BO15066 747 aa18.93■□□□□ 0.62
TUSC3-201ENST00000382020 DHX29Q7Z478 1369 aaKnown RBP18.92■□□□□ 0.62
TUSC3-201ENST00000382020 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
TUSC3-201ENST00000382020 SOX12O15370 315 aa18.91■□□□□ 0.62
TUSC3-201ENST00000382020 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
TUSC3-201ENST00000382020 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
TUSC3-201ENST00000382020 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.62
TUSC3-201ENST00000382020 STAG3Q9UJ98 1225 aa18.89■□□□□ 0.62
TUSC3-201ENST00000382020 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
TUSC3-201ENST00000382020 KDM6BO15054 1643 aa18.89■□□□□ 0.61
TUSC3-201ENST00000382020 SMC4Q9NTJ3 1288 aa18.89■□□□□ 0.61
TUSC3-201ENST00000382020 CFAP53Q96M91 514 aa18.88■□□□□ 0.61
TUSC3-201ENST00000382020 CFAP70Q5T0N1 1121 aa18.87■□□□□ 0.61
TUSC3-201ENST00000382020 ANP32BQ92688 251 aaKnown RBP18.87■□□□□ 0.61
TUSC3-201ENST00000382020 TMEM132EQ6IEE7 984 aa18.86■□□□□ 0.61
TUSC3-201ENST00000382020 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
TUSC3-201ENST00000382020 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
TUSC3-201ENST00000382020 MAPK8IP3Q9UPT6 1336 aa18.86■□□□□ 0.61
TUSC3-201ENST00000382020 A0A0U1RQG5 324 aaPredicted RBP18.85■□□□□ 0.61
TUSC3-201ENST00000382020 TNNQ9UQP3 1299 aa18.85■□□□□ 0.61
TUSC3-201ENST00000382020 FOXD4L5Q5VV16 416 aaPredicted RBP18.85■□□□□ 0.61
TUSC3-201ENST00000382020 FOXD4L4Q8WXT5 416 aaPredicted RBP18.85■□□□□ 0.61
TUSC3-201ENST00000382020 HSCBQ8IWL3 235 aa18.84■□□□□ 0.61
TUSC3-201ENST00000382020 PLB1Q6P1J6 1458 aa18.84■□□□□ 0.61
TUSC3-201ENST00000382020 MIA2Q96PC5 1412 aa18.83■□□□□ 0.61
TUSC3-201ENST00000382020 DISP3Q9P2K9 1392 aa18.83■□□□□ 0.61
TUSC3-201ENST00000382020 IGHDP01880 384 aa18.83■□□□□ 0.61
TUSC3-201ENST00000382020 AFAP1Q8N556 730 aa18.83■□□□□ 0.61
TUSC3-201ENST00000382020 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.61
TUSC3-201ENST00000382020 RRAGDQ9NQL2 400 aaPredicted RBP18.83■□□□□ 0.6
TUSC3-201ENST00000382020 TSR2Q969E8 191 aaKnown RBP18.82■□□□□ 0.6
TUSC3-201ENST00000382020 SEC24BO95487 1268 aa18.82■□□□□ 0.6
TUSC3-201ENST00000382020 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
TUSC3-201ENST00000382020 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
TUSC3-201ENST00000382020 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
TUSC3-201ENST00000382020 DUSP27Q5VZP5 1158 aa18.81■□□□□ 0.6
TUSC3-201ENST00000382020 MAGI3Q5TCQ9 1506 aa18.8■□□□□ 0.6
TUSC3-201ENST00000382020 E9PSI1 815 aa18.8■□□□□ 0.6
TUSC3-201ENST00000382020 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
TUSC3-201ENST00000382020 SLC12A5Q9H2X9 1139 aa18.79■□□□□ 0.6
TUSC3-201ENST00000382020 C9orf84Q5VXU9 1444 aa18.79■□□□□ 0.6
TUSC3-201ENST00000382020 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
TUSC3-201ENST00000382020 FOXD4L6Q3SYB3 417 aaPredicted RBP18.79■□□□□ 0.6
TUSC3-201ENST00000382020 FOXD4L3Q6VB84 417 aaPredicted RBP18.79■□□□□ 0.6
TUSC3-201ENST00000382020 PDZRN3Q9UPQ7 1066 aa18.78■□□□□ 0.6
TUSC3-201ENST00000382020 TCP11L2Q8N4U5 519 aa18.78■□□□□ 0.6
TUSC3-201ENST00000382020 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
TUSC3-201ENST00000382020 CFAP43Q8NDM7 1665 aa18.78■□□□□ 0.6
TUSC3-201ENST00000382020 NOL8Q76FK4 1167 aaKnown RBP18.78■□□□□ 0.6
TUSC3-201ENST00000382020 UGGT2Q9NYU1 1516 aa18.76■□□□□ 0.59
TUSC3-201ENST00000382020 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
TUSC3-201ENST00000382020 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms