RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 FAM135AQ9P2D6 1515 aa28.51■■■□□ 2.15
CCM2-202ENST00000381112 FRMPD1Q5SYB0 1578 aa28.48■■■□□ 2.15
CCM2-202ENST00000381112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.48■■■□□ 2.15
CCM2-202ENST00000381112 A2MP01023 1474 aa28.47■■■□□ 2.15
CCM2-202ENST00000381112 IQGAP3Q86VI3 1631 aa28.45■■■□□ 2.15
CCM2-202ENST00000381112 EIF2AK4Q9P2K8 1649 aaKnown RBP28.45■■■□□ 2.14
CCM2-202ENST00000381112 ABCA6Q8N139 1617 aa28.43■■■□□ 2.14
CCM2-202ENST00000381112 ZMYM4Q5VZL5 1548 aa28.43■■■□□ 2.14
CCM2-202ENST00000381112 DEPDC5O75140 1603 aa28.42■■■□□ 2.14
CCM2-202ENST00000381112 TONSLQ96HA7 1378 aa28.42■■■□□ 2.14
CCM2-202ENST00000381112 KIF3BO15066 747 aa28.42■■■□□ 2.14
CCM2-202ENST00000381112 DIP2CQ9Y2E4 1556 aa28.39■■■□□ 2.14
CCM2-202ENST00000381112 RPRD2Q5VT52 1461 aaKnown RBP28.39■■■□□ 2.14
CCM2-202ENST00000381112 YEATS2Q9ULM3 1422 aa28.38■■■□□ 2.13
CCM2-202ENST00000381112 COL17A1Q9UMD9 1497 aaPredicted RBP28.36■■■□□ 2.13
CCM2-202ENST00000381112 VWDEQ8N2E2 1590 aa28.36■■■□□ 2.13
CCM2-202ENST00000381112 PRDM15P57071 1507 aaPredicted RBP28.35■■■□□ 2.13
CCM2-202ENST00000381112 PPP1R15AO75807 674 aaPredicted RBP28.34■■■□□ 2.13
CCM2-202ENST00000381112 MROH1Q8NDA8 1641 aa28.34■■■□□ 2.13
CCM2-202ENST00000381112 KANK1Q14678 1352 aa28.33■■■□□ 2.13
CCM2-202ENST00000381112 RNF17Q9BXT8 1623 aaKnown RBP28.31■■■□□ 2.12
CCM2-202ENST00000381112 BCORL1Q5H9F3 1711 aa28.3■■■□□ 2.12
CCM2-202ENST00000381112 PLA2R1Q13018 1463 aa28.27■■■□□ 2.12
CCM2-202ENST00000381112 ATP10AO60312 1499 aa28.25■■■□□ 2.11
CCM2-202ENST00000381112 TRHP20396 242 aaPredicted RBP28.25■■■□□ 2.11
CCM2-202ENST00000381112 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
CCM2-202ENST00000381112 TET3O43151 1660 aa28.23■■■□□ 2.11
CCM2-202ENST00000381112 LMTK2Q8IWU2 1503 aa28.22■■■□□ 2.11
CCM2-202ENST00000381112 GGT6Q6P531 493 aa28.21■■■□□ 2.11
CCM2-202ENST00000381112 REREQ9P2R6 1566 aa28.2■■■□□ 2.11
CCM2-202ENST00000381112 E9PCH4 1651 aa28.19■■■□□ 2.1
CCM2-202ENST00000381112 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
CCM2-202ENST00000381112 CCDC144AA2RUR9 1427 aa28.18■■■□□ 2.1
CCM2-202ENST00000381112 PTPRTO14522 1441 aa28.16■■■□□ 2.1
CCM2-202ENST00000381112 EFCAB6Q5THR3 1501 aa28.16■■■□□ 2.1
CCM2-202ENST00000381112 ARHGEF40Q8TER5 1519 aa28.15■■■□□ 2.1
CCM2-202ENST00000381112 AGLP35573 1532 aa28.14■■■□□ 2.09
CCM2-202ENST00000381112 ABCC3O15438 1527 aa28.13■■■□□ 2.09
CCM2-202ENST00000381112 WASHC2CQ9Y4E1 1318 aa28.12■■■□□ 2.09
CCM2-202ENST00000381112 TRPM2O94759 1503 aa28.11■■■□□ 2.09
CCM2-202ENST00000381112 CEP152O94986 1710 aa28.09■■■□□ 2.09
CCM2-202ENST00000381112 SPHKAPQ2M3C7 1700 aa28.06■■■□□ 2.08
CCM2-202ENST00000381112 NPATQ14207 1427 aa28.05■■■□□ 2.08
CCM2-202ENST00000381112 NBPF8Q3BBV2 869 aa28.03■■■□□ 2.08
CCM2-202ENST00000381112 SIGLEC1Q9BZZ2 1709 aa28.02■■■□□ 2.08
CCM2-202ENST00000381112 ZC3H13Q5T200 1668 aaKnown RBP28.02■■■□□ 2.08
CCM2-202ENST00000381112 PPP6R1Q9UPN7 881 aa28■■■□□ 2.07
CCM2-202ENST00000381112 CAMSAP1Q5T5Y3 1602 aa28■■■□□ 2.07
CCM2-202ENST00000381112 ARHGAP31Q2M1Z3 1444 aa28■■■□□ 2.07
CCM2-202ENST00000381112 SPATA31E1Q6ZUB1 1445 aa27.99■■■□□ 2.07
CCM2-202ENST00000381112 CLTCL1P53675 1640 aa27.98■■■□□ 2.07
CCM2-202ENST00000381112 UHRF1BP1Q6BDS2 1440 aa27.98■■■□□ 2.07
CCM2-202ENST00000381112 DCAF11Q8TEB1 546 aa27.96■■■□□ 2.07
CCM2-202ENST00000381112 RGL3Q3MIN7 710 aa27.95■■■□□ 2.07
CCM2-202ENST00000381112 CNTLNQ9NXG0 1405 aa27.94■■■□□ 2.06
CCM2-202ENST00000381112 NOS1P29475 1434 aa27.93■■■□□ 2.06
CCM2-202ENST00000381112 UGGT1Q9NYU2 1555 aa27.91■■■□□ 2.06
CCM2-202ENST00000381112 KDM2AQ9Y2K7 1162 aa27.91■■■□□ 2.06
CCM2-202ENST00000381112 NEURL4Q96JN8 1562 aa27.9■■■□□ 2.06
CCM2-202ENST00000381112 MLECQ14165 292 aa27.88■■■□□ 2.05
CCM2-202ENST00000381112 ZNF326Q5BKZ1 582 aaKnown RBP27.88■■■□□ 2.05
CCM2-202ENST00000381112 PRAG1Q86YV5 1406 aa27.85■■■□□ 2.05
CCM2-202ENST00000381112 ARID4BQ4LE39 1312 aaPredicted RBP27.84■■■□□ 2.05
CCM2-202ENST00000381112 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
CCM2-202ENST00000381112 DIEXFQ68CQ4 756 aaKnown RBP27.83■■■□□ 2.05
CCM2-202ENST00000381112 SYNMO15061 1565 aa27.83■■■□□ 2.05
CCM2-202ENST00000381112 CLTCQ00610 1675 aaKnown RBP27.81■■■□□ 2.04
CCM2-202ENST00000381112 STAC3Q96MF2 364 aa27.81■■■□□ 2.04
CCM2-202ENST00000381112 EIF4G2P78344 907 aaKnown RBP eCLIP27.8■■■□□ 2.04
CCM2-202ENST00000381112 HIRIP3Q9BW71 556 aaPredicted RBP27.8■■■□□ 2.04
CCM2-202ENST00000381112 ADGRB3O60242 1522 aa27.79■■■□□ 2.04
CCM2-202ENST00000381112 PIK3C2BO00750 1634 aa27.79■■■□□ 2.04
CCM2-202ENST00000381112 HSPA5P11021 654 aaKnown RBP27.78■■■□□ 2.04
CCM2-202ENST00000381112 ERVK-7P63135 1459 aa27.77■■■□□ 2.04
CCM2-202ENST00000381112 PREX1Q8TCU6 1659 aa27.77■■■□□ 2.04
CCM2-202ENST00000381112 CFAP65Q6ZU64 1925 aaKnown RBP27.77■■■□□ 2.04
CCM2-202ENST00000381112 FBXO31Q5XUX0 539 aaPredicted RBP27.76■■■□□ 2.04
CCM2-202ENST00000381112 SLC52A1Q9NWF4 448 aa27.76■■■□□ 2.04
CCM2-202ENST00000381112 KIF1BO60333 1816 aa27.76■■■□□ 2.03
CCM2-202ENST00000381112 ESF1Q9H501 851 aaKnown RBP27.76■■■□□ 2.03
CCM2-202ENST00000381112 IDI1Q13907 227 aa27.73■■■□□ 2.03
CCM2-202ENST00000381112 ZMYM3Q14202 1370 aa27.73■■■□□ 2.03
CCM2-202ENST00000381112 MROH2AA6NES4 1674 aa27.72■■■□□ 2.03
CCM2-202ENST00000381112 TRPM1Q7Z4N2 1603 aa27.71■■■□□ 2.03
CCM2-202ENST00000381112 CHGAP10645 457 aaKnown RBP27.71■■■□□ 2.03
CCM2-202ENST00000381112 SPATA31D1Q6ZQQ2 1576 aa27.7■■■□□ 2.02
CCM2-202ENST00000381112 MYOM2P54296 1465 aa27.7■■■□□ 2.02
CCM2-202ENST00000381112 ROCK2O75116 1388 aaKnown RBP27.69■■■□□ 2.02
CCM2-202ENST00000381112 MADDQ8WXG6 1647 aa27.69■■■□□ 2.02
CCM2-202ENST00000381112 CARD11Q9BXL7 1154 aa27.69■■■□□ 2.02
CCM2-202ENST00000381112 GPRASP1Q5JY77 1395 aa27.68■■■□□ 2.02
CCM2-202ENST00000381112 USP47Q96K76 1375 aa27.68■■■□□ 2.02
CCM2-202ENST00000381112 RPGRIP1LQ68CZ1 1315 aa27.67■■■□□ 2.02
CCM2-202ENST00000381112 NBPF1Q3BBV0 1214 aa27.66■■■□□ 2.02
CCM2-202ENST00000381112 IFT172Q9UG01 1749 aa27.64■■■□□ 2.02
CCM2-202ENST00000381112 NRXN1Q9ULB1 1477 aa27.63■■■□□ 2.01
CCM2-202ENST00000381112 ADGRF5Q8IZF2 1346 aa27.62■■■□□ 2.01
CCM2-202ENST00000381112 TMEM131LA2VDJ0 1609 aa27.6■■■□□ 2.01
CCM2-202ENST00000381112 LAMC1P11047 1609 aa27.59■■■□□ 2.01
CCM2-202ENST00000381112 PPLO60437 1756 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms