RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 SLC4A1APQ9BWU0 796 aaKnown RBP30.01■■■□□ 2.4
TSSC4-203ENST00000380996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30■■■□□ 2.39
TSSC4-203ENST00000380996 UNC13BO14795 1591 aa29.99■■■□□ 2.39
TSSC4-203ENST00000380996 KDM5DQ9BY66 1539 aa29.99■■■□□ 2.39
TSSC4-203ENST00000380996 ARHGEF40Q8TER5 1519 aa29.97■■■□□ 2.39
TSSC4-203ENST00000380996 PZPP20742 1482 aa29.96■■■□□ 2.39
TSSC4-203ENST00000380996 REREQ9P2R6 1566 aa29.96■■■□□ 2.39
TSSC4-203ENST00000380996 KANK1Q14678 1352 aa29.95■■■□□ 2.38
TSSC4-203ENST00000380996 BCORL1Q5H9F3 1711 aa29.91■■■□□ 2.38
TSSC4-203ENST00000380996 DEPDC5O75140 1603 aa29.91■■■□□ 2.38
TSSC4-203ENST00000380996 ZEB1P37275 1124 aaPredicted RBP29.91■■■□□ 2.38
TSSC4-203ENST00000380996 FAM135AQ9P2D6 1515 aa29.9■■■□□ 2.38
TSSC4-203ENST00000380996 AGLP35573 1532 aa29.89■■■□□ 2.38
TSSC4-203ENST00000380996 GGT6Q6P531 493 aa29.89■■■□□ 2.38
TSSC4-203ENST00000380996 RNF17Q9BXT8 1623 aaKnown RBP29.88■■■□□ 2.37
TSSC4-203ENST00000380996 IQGAP3Q86VI3 1631 aa29.87■■■□□ 2.37
TSSC4-203ENST00000380996 PKD2Q13563 968 aa29.87■■■□□ 2.37
TSSC4-203ENST00000380996 PRDM15P57071 1507 aaPredicted RBP29.87■■■□□ 2.37
TSSC4-203ENST00000380996 MROH1Q8NDA8 1641 aa29.82■■■□□ 2.36
TSSC4-203ENST00000380996 VWDEQ8N2E2 1590 aa29.82■■■□□ 2.36
TSSC4-203ENST00000380996 PPP6R1Q9UPN7 881 aa29.81■■■□□ 2.36
TSSC4-203ENST00000380996 FOXD1Q16676 465 aa29.8■■■□□ 2.36
TSSC4-203ENST00000380996 WASHC2CQ9Y4E1 1318 aa29.78■■■□□ 2.36
TSSC4-203ENST00000380996 ARID4BQ4LE39 1312 aaPredicted RBP29.77■■■□□ 2.36
TSSC4-203ENST00000380996 LMTK2Q8IWU2 1503 aa29.76■■■□□ 2.35
TSSC4-203ENST00000380996 ANKRD30BQ9BXX2 1392 aa29.75■■■□□ 2.35
TSSC4-203ENST00000380996 TET3O43151 1660 aa29.71■■■□□ 2.35
TSSC4-203ENST00000380996 SIN3AQ96ST3 1273 aa29.71■■■□□ 2.35
TSSC4-203ENST00000380996 ABCC3O15438 1527 aa29.69■■■□□ 2.34
TSSC4-203ENST00000380996 NEUROD1Q13562 356 aa29.69■■■□□ 2.34
TSSC4-203ENST00000380996 MLECQ14165 292 aa29.69■■■□□ 2.34
TSSC4-203ENST00000380996 SIGLEC1Q9BZZ2 1709 aa29.68■■■□□ 2.34
TSSC4-203ENST00000380996 ESF1Q9H501 851 aaKnown RBP29.66■■■□□ 2.34
TSSC4-203ENST00000380996 EFCAB6Q5THR3 1501 aa29.65■■■□□ 2.34
TSSC4-203ENST00000380996 ZC3H13Q5T200 1668 aaKnown RBP29.65■■■□□ 2.34
TSSC4-203ENST00000380996 TIMELESSQ9UNS1 1208 aa29.64■■■□□ 2.34
TSSC4-203ENST00000380996 RPRD2Q5VT52 1461 aaKnown RBP29.63■■■□□ 2.33
TSSC4-203ENST00000380996 CEP152O94986 1710 aa29.63■■■□□ 2.33
TSSC4-203ENST00000380996 E9PCH4 1651 aa29.61■■■□□ 2.33
TSSC4-203ENST00000380996 ARHGAP31Q2M1Z3 1444 aa29.6■■■□□ 2.33
TSSC4-203ENST00000380996 PTPRTO14522 1441 aa29.58■■■□□ 2.33
TSSC4-203ENST00000380996 NPATQ14207 1427 aa29.58■■■□□ 2.33
TSSC4-203ENST00000380996 CCDC144AA2RUR9 1427 aa29.57■■■□□ 2.32
TSSC4-203ENST00000380996 PLA2R1Q13018 1463 aa29.57■■■□□ 2.32
TSSC4-203ENST00000380996 CAMSAP1Q5T5Y3 1602 aa29.57■■■□□ 2.32
TSSC4-203ENST00000380996 TONSLQ96HA7 1378 aa29.55■■■□□ 2.32
TSSC4-203ENST00000380996 CNTLNQ9NXG0 1405 aa29.54■■■□□ 2.32
TSSC4-203ENST00000380996 TRPM2O94759 1503 aa29.51■■■□□ 2.31
TSSC4-203ENST00000380996 CLTCQ00610 1675 aaKnown RBP29.48■■■□□ 2.31
TSSC4-203ENST00000380996 SPHKAPQ2M3C7 1700 aa29.48■■■□□ 2.31
TSSC4-203ENST00000380996 ZMYM3Q14202 1370 aa29.47■■■□□ 2.31
TSSC4-203ENST00000380996 NOS1P29475 1434 aa29.46■■■□□ 2.31
TSSC4-203ENST00000380996 AEBP2Q6ZN18 517 aaPredicted RBP29.4■■■□□ 2.3
TSSC4-203ENST00000380996 L3MBTL2Q969R5 705 aa29.4■■■□□ 2.3
TSSC4-203ENST00000380996 SLC52A1Q9NWF4 448 aa29.4■■■□□ 2.3
TSSC4-203ENST00000380996 FBXO31Q5XUX0 539 aaPredicted RBP29.39■■■□□ 2.3
TSSC4-203ENST00000380996 ERVK-7P63135 1459 aa29.39■■■□□ 2.29
TSSC4-203ENST00000380996 MROH2AA6NES4 1674 aa29.38■■■□□ 2.29
TSSC4-203ENST00000380996 PPP1R15AO75807 674 aaPredicted RBP29.37■■■□□ 2.29
TSSC4-203ENST00000380996 CLTCL1P53675 1640 aa29.36■■■□□ 2.29
TSSC4-203ENST00000380996 PREX1Q8TCU6 1659 aa29.34■■■□□ 2.29
TSSC4-203ENST00000380996 FER1L4A9Z1Z3 1794 aa29.34■■■□□ 2.29
TSSC4-203ENST00000380996 KDM4FA0A1W2PPD8 638 aa29.33■■■□□ 2.29
TSSC4-203ENST00000380996 CFAP65Q6ZU64 1925 aaKnown RBP29.33■■■□□ 2.29
TSSC4-203ENST00000380996 RGL3Q3MIN7 710 aa29.32■■■□□ 2.28
TSSC4-203ENST00000380996 SYNMO15061 1565 aa29.32■■■□□ 2.28
TSSC4-203ENST00000380996 SPATA31D1Q6ZQQ2 1576 aa29.32■■■□□ 2.28
TSSC4-203ENST00000380996 UGGT1Q9NYU2 1555 aa29.31■■■□□ 2.28
TSSC4-203ENST00000380996 SPATA31E1Q6ZUB1 1445 aa29.31■■■□□ 2.28
TSSC4-203ENST00000380996 ADAMTSL3P82987 1691 aa29.29■■■□□ 2.28
TSSC4-203ENST00000380996 IDI1Q13907 227 aa29.29■■■□□ 2.28
TSSC4-203ENST00000380996 NEURL4Q96JN8 1562 aa29.29■■■□□ 2.28
TSSC4-203ENST00000380996 MADDQ8WXG6 1647 aa29.27■■■□□ 2.28
TSSC4-203ENST00000380996 PIK3C2BO00750 1634 aa29.26■■■□□ 2.28
TSSC4-203ENST00000380996 CHGAP10645 457 aaKnown RBP29.26■■■□□ 2.27
TSSC4-203ENST00000380996 DCAF11Q8TEB1 546 aa29.26■■■□□ 2.27
TSSC4-203ENST00000380996 TNRQ92752 1358 aa29.26■■■□□ 2.27
TSSC4-203ENST00000380996 CEBPAP49715 358 aaPredicted RBP29.25■■■□□ 2.27
TSSC4-203ENST00000380996 STAC3Q96MF2 364 aa29.25■■■□□ 2.27
TSSC4-203ENST00000380996 KIF1BO60333 1816 aa29.22■■■□□ 2.27
TSSC4-203ENST00000380996 C3P01024 1663 aa29.21■■■□□ 2.27
TSSC4-203ENST00000380996 ADGRB3O60242 1522 aa29.2■■■□□ 2.27
TSSC4-203ENST00000380996 ZNF326Q5BKZ1 582 aaKnown RBP29.2■■■□□ 2.27
TSSC4-203ENST00000380996 KDM2AQ9Y2K7 1162 aa29.2■■■□□ 2.27
TSSC4-203ENST00000380996 RIMS1Q86UR5 1692 aaKnown RBP29.2■■■□□ 2.26
TSSC4-203ENST00000380996 STAG3Q9UJ98 1225 aa29.2■■■□□ 2.26
TSSC4-203ENST00000380996 RPGRIP1LQ68CZ1 1315 aa29.19■■■□□ 2.26
TSSC4-203ENST00000380996 PLPPR3Q6T4P5 718 aa29.18■■■□□ 2.26
TSSC4-203ENST00000380996 UHRF1BP1Q6BDS2 1440 aa29.14■■■□□ 2.26
TSSC4-203ENST00000380996 NLRP1Q9C000 1473 aa29.14■■■□□ 2.26
TSSC4-203ENST00000380996 NBPF8Q3BBV2 869 aa29.12■■■□□ 2.25
TSSC4-203ENST00000380996 TMEM131LA2VDJ0 1609 aa29.1■■■□□ 2.25
TSSC4-203ENST00000380996 PTPRMP28827 1452 aa29.09■■■□□ 2.25
TSSC4-203ENST00000380996 PRAG1Q86YV5 1406 aa29.08■■■□□ 2.25
TSSC4-203ENST00000380996 A2ML1A8K2U0 1454 aa29.06■■■□□ 2.24
TSSC4-203ENST00000380996 MYOM2P54296 1465 aa29.06■■■□□ 2.24
TSSC4-203ENST00000380996 VGFO15240 615 aaPredicted RBP29.05■■■□□ 2.24
TSSC4-203ENST00000380996 KDM5AP29375 1690 aaKnown RBP29.01■■■□□ 2.24
TSSC4-203ENST00000380996 HDGFP51858 240 aaKnown RBP29.01■■■□□ 2.23
TSSC4-203ENST00000380996 NEXMIFQ5QGS0 1516 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms