RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 MROH2AA6NES4 1674 aa9.92□□□□□ -0.82
NFX1-202ENST00000379521 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
NFX1-202ENST00000379521 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
NFX1-202ENST00000379521 EFCAB6Q5THR3 1501 aa9.92□□□□□ -0.82
NFX1-202ENST00000379521 SIGLEC1Q9BZZ2 1709 aa9.92□□□□□ -0.82
NFX1-202ENST00000379521 CNTLNQ9NXG0 1405 aa9.91□□□□□ -0.82
NFX1-202ENST00000379521 DHX29Q7Z478 1369 aaKnown RBP9.91□□□□□ -0.82
NFX1-202ENST00000379521 ABCA6Q8N139 1617 aa9.91□□□□□ -0.82
NFX1-202ENST00000379521 ARHGAP5Q13017 1502 aa9.91□□□□□ -0.82
NFX1-202ENST00000379521 SETBP1Q9Y6X0 1596 aa9.91□□□□□ -0.82
NFX1-202ENST00000379521 PRAG1Q86YV5 1406 aa9.9□□□□□ -0.82
NFX1-202ENST00000379521 A2MP01023 1474 aa9.9□□□□□ -0.82
NFX1-202ENST00000379521 SYNMO15061 1565 aa9.9□□□□□ -0.83
NFX1-202ENST00000379521 INSRP06213 1382 aa9.89□□□□□ -0.83
NFX1-202ENST00000379521 MYOM2P54296 1465 aa9.89□□□□□ -0.83
NFX1-202ENST00000379521 MLH3Q9UHC1 1453 aa9.89□□□□□ -0.83
NFX1-202ENST00000379521 SCAPERQ9BY12 1400 aa9.88□□□□□ -0.83
NFX1-202ENST00000379521 ADGRB3O60242 1522 aa9.88□□□□□ -0.83
NFX1-202ENST00000379521 USP32Q8NFA0 1604 aa9.88□□□□□ -0.83
NFX1-202ENST00000379521 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
NFX1-202ENST00000379521 KIF1BO60333 1816 aa9.87□□□□□ -0.83
NFX1-202ENST00000379521 WASHC2AQ641Q2 1341 aa9.87□□□□□ -0.83
NFX1-202ENST00000379521 TRAPPC8Q9Y2L5 1435 aa9.86□□□□□ -0.83
NFX1-202ENST00000379521 NBPF8Q3BBV2 869 aa9.86□□□□□ -0.83
NFX1-202ENST00000379521 CCDC7Q96M83 1385 aa9.86□□□□□ -0.83
NFX1-202ENST00000379521 SETD1AO15047 1707 aaKnown RBP9.86□□□□□ -0.83
NFX1-202ENST00000379521 TONSLQ96HA7 1378 aa9.86□□□□□ -0.83
NFX1-202ENST00000379521 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
NFX1-202ENST00000379521 KDM5AP29375 1690 aaKnown RBP9.85□□□□□ -0.83
NFX1-202ENST00000379521 FANCAO15360 1455 aa9.84□□□□□ -0.83
NFX1-202ENST00000379521 CFDP1Q9UEE9 299 aaPredicted RBP9.84□□□□□ -0.83
NFX1-202ENST00000379521 DIP2CQ9Y2E4 1556 aa9.84□□□□□ -0.83
NFX1-202ENST00000379521 NEO1Q92859 1461 aa9.84□□□□□ -0.83
NFX1-202ENST00000379521 COL17A1Q9UMD9 1497 aaPredicted RBP9.84□□□□□ -0.83
NFX1-202ENST00000379521 PLEKHD1A6NEE1 506 aa9.83□□□□□ -0.84
NFX1-202ENST00000379521 L3MBTL2Q969R5 705 aa9.82□□□□□ -0.84
NFX1-202ENST00000379521 CLTCQ00610 1675 aaKnown RBP9.82□□□□□ -0.84
NFX1-202ENST00000379521 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
NFX1-202ENST00000379521 POGZQ7Z3K3 1410 aa9.81□□□□□ -0.84
NFX1-202ENST00000379521 C11orf95C9JLR9 678 aaPredicted RBP9.8□□□□□ -0.84
NFX1-202ENST00000379521 KIF13AQ9H1H9 1805 aa9.8□□□□□ -0.84
NFX1-202ENST00000379521 ADGRB1O14514 1584 aa9.8□□□□□ -0.84
NFX1-202ENST00000379521 ASXL2Q76L83 1435 aa9.8□□□□□ -0.84
NFX1-202ENST00000379521 DIP2BQ9P265 1576 aa9.8□□□□□ -0.84
NFX1-202ENST00000379521 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
NFX1-202ENST00000379521 ARHGAP31Q2M1Z3 1444 aa9.79□□□□□ -0.84
NFX1-202ENST00000379521 UGGT1Q9NYU2 1555 aa9.78□□□□□ -0.84
NFX1-202ENST00000379521 LRPPRCP42704 1394 aaKnown RBP9.78□□□□□ -0.84
NFX1-202ENST00000379521 ABCC3O15438 1527 aa9.78□□□□□ -0.84
NFX1-202ENST00000379521 CENPBP07199 599 aaPredicted RBP9.77□□□□□ -0.84
NFX1-202ENST00000379521 AGLP35573 1532 aa9.77□□□□□ -0.85
NFX1-202ENST00000379521 ARHGEF28Q8N1W1 1705 aaKnown RBP9.77□□□□□ -0.85
NFX1-202ENST00000379521 ITGAEP38570 1179 aa9.77□□□□□ -0.85
NFX1-202ENST00000379521 PREX1Q8TCU6 1659 aa9.76□□□□□ -0.85
NFX1-202ENST00000379521 HSPA5P11021 654 aaKnown RBP9.76□□□□□ -0.85
NFX1-202ENST00000379521 RIMBP3CA6NJZ7 1639 aa9.76□□□□□ -0.85
NFX1-202ENST00000379521 RIMBP3BA6NNM3 1639 aa9.76□□□□□ -0.85
NFX1-202ENST00000379521 RIMBP3Q9UFD9 1639 aa9.76□□□□□ -0.85
NFX1-202ENST00000379521 NOS1P29475 1434 aa9.75□□□□□ -0.85
NFX1-202ENST00000379521 ROCK2O75116 1388 aaKnown RBP9.75□□□□□ -0.85
NFX1-202ENST00000379521 ANKRD26Q9UPS8 1709 aa9.75□□□□□ -0.85
NFX1-202ENST00000379521 TMEM131LA2VDJ0 1609 aa9.75□□□□□ -0.85
NFX1-202ENST00000379521 KIF7Q2M1P5 1343 aa9.74□□□□□ -0.85
NFX1-202ENST00000379521 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
NFX1-202ENST00000379521 NEXMIFQ5QGS0 1516 aa9.74□□□□□ -0.85
NFX1-202ENST00000379521 NUP155O75694 1391 aa9.74□□□□□ -0.85
NFX1-202ENST00000379521 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
NFX1-202ENST00000379521 ADGRL1O94910 1474 aa9.73□□□□□ -0.85
NFX1-202ENST00000379521 RNF123Q5XPI4 1314 aa9.73□□□□□ -0.85
NFX1-202ENST00000379521 MYO5BQ9ULV0 1848 aa9.73□□□□□ -0.85
NFX1-202ENST00000379521 KNDC1Q76NI1 1749 aa9.72□□□□□ -0.85
NFX1-202ENST00000379521 USP47Q96K76 1375 aa9.72□□□□□ -0.85
NFX1-202ENST00000379521 SBNO2Q9Y2G9 1366 aa9.72□□□□□ -0.85
NFX1-202ENST00000379521 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
NFX1-202ENST00000379521 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
NFX1-202ENST00000379521 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
NFX1-202ENST00000379521 NPC1L1Q9UHC9 1359 aa9.71□□□□□ -0.86
NFX1-202ENST00000379521 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.86
NFX1-202ENST00000379521 HNRNPMP52272 730 aaKnown RBP eCLIP9.7□□□□□ -0.86
NFX1-202ENST00000379521 KCNH8Q96L42 1107 aa9.7□□□□□ -0.86
NFX1-202ENST00000379521 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
NFX1-202ENST00000379521 PKD2Q13563 968 aa9.7□□□□□ -0.86
NFX1-202ENST00000379521 EIF4G2P78344 907 aaKnown RBP eCLIP9.69□□□□□ -0.86
NFX1-202ENST00000379521 TESK2Q96S53 571 aa9.69□□□□□ -0.86
NFX1-202ENST00000379521 SLC4A1APQ9BWU0 796 aaKnown RBP9.69□□□□□ -0.86
NFX1-202ENST00000379521 GTF3C3Q9Y5Q9 886 aa9.69□□□□□ -0.86
NFX1-202ENST00000379521 PIK3C2GO75747 1445 aa9.69□□□□□ -0.86
NFX1-202ENST00000379521 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
NFX1-202ENST00000379521 SPATA31D1Q6ZQQ2 1576 aa9.68□□□□□ -0.86
NFX1-202ENST00000379521 ASXL1Q8IXJ9 1541 aa9.68□□□□□ -0.86
NFX1-202ENST00000379521 CCDC144AA2RUR9 1427 aa9.68□□□□□ -0.86
NFX1-202ENST00000379521 NRXN3Q9Y4C0 1643 aa9.68□□□□□ -0.86
NFX1-202ENST00000379521 WASHC2CQ9Y4E1 1318 aa9.68□□□□□ -0.86
NFX1-202ENST00000379521 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
NFX1-202ENST00000379521 FOXD1Q16676 465 aa9.67□□□□□ -0.86
NFX1-202ENST00000379521 PRKRIP1Q9H875 184 aaPredicted RBP9.67□□□□□ -0.86
NFX1-202ENST00000379521 EFCAB2Q5VUJ9 269 aa9.66□□□□□ -0.86
NFX1-202ENST00000379521 SCAF11Q99590 1463 aaKnown RBP9.66□□□□□ -0.86
NFX1-202ENST00000379521 RIMS1Q86UR5 1692 aaKnown RBP9.65□□□□□ -0.86
NFX1-202ENST00000379521 NPATQ14207 1427 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms