RNA–Protein interactions for RNA: ENST00000378953.8

C5orf56-203, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-203ENST00000378953 NCOA1Q15788 1441 aa30.29■■■□□ 2.44
C5orf56-203ENST00000378953 WASHC2CQ9Y4E1 1318 aa30.28■■■□□ 2.44
C5orf56-203ENST00000378953 FAM135AQ9P2D6 1515 aa30.27■■■□□ 2.44
C5orf56-203ENST00000378953 HSPA2P54652 639 aa30.27■■■□□ 2.44
C5orf56-203ENST00000378953 NPATQ14207 1427 aa30.27■■■□□ 2.44
C5orf56-203ENST00000378953 EIF2AK4Q9P2K8 1649 aaKnown RBP30.26■■■□□ 2.44
C5orf56-203ENST00000378953 ERBINQ96RT1 1412 aa30.26■■■□□ 2.43
C5orf56-203ENST00000378953 SETD1BQ9UPS6 1966 aaKnown RBP30.25■■■□□ 2.43
C5orf56-203ENST00000378953 UHRF1BP1Q6BDS2 1440 aa30.25■■■□□ 2.43
C5orf56-203ENST00000378953 ADGRL2O95490 1459 aa30.25■■■□□ 2.43
C5orf56-203ENST00000378953 KDM5DQ9BY66 1539 aa30.24■■■□□ 2.43
C5orf56-203ENST00000378953 RNF17Q9BXT8 1623 aaKnown RBP30.24■■■□□ 2.43
C5orf56-203ENST00000378953 PREX1Q8TCU6 1659 aa30.23■■■□□ 2.43
C5orf56-203ENST00000378953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.23■■■□□ 2.43
C5orf56-203ENST00000378953 PTPRKQ15262 1439 aa30.22■■■□□ 2.43
C5orf56-203ENST00000378953 MROH1Q8NDA8 1641 aa30.16■■■□□ 2.42
C5orf56-203ENST00000378953 RRBP1Q9P2E9 1410 aaKnown RBP30.14■■■□□ 2.42
C5orf56-203ENST00000378953 PZPP20742 1482 aa30.14■■■□□ 2.42
C5orf56-203ENST00000378953 ABCC3O15438 1527 aa30.14■■■□□ 2.42
C5orf56-203ENST00000378953 ITGAEP38570 1179 aa30.13■■■□□ 2.41
C5orf56-203ENST00000378953 FBXO31Q5XUX0 539 aaPredicted RBP30.13■■■□□ 2.41
C5orf56-203ENST00000378953 ROCK1Q13464 1354 aa30.12■■■□□ 2.41
C5orf56-203ENST00000378953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.11■■■□□ 2.41
C5orf56-203ENST00000378953 PRDM15P57071 1507 aaPredicted RBP30.1■■■□□ 2.41
C5orf56-203ENST00000378953 ANKRD50Q9ULJ7 1429 aa30.09■■■□□ 2.41
C5orf56-203ENST00000378953 ZC3H13Q5T200 1668 aaKnown RBP30.08■■■□□ 2.41
C5orf56-203ENST00000378953 KANK1Q14678 1352 aa30.07■■■□□ 2.4
C5orf56-203ENST00000378953 TNRQ92752 1358 aa30.06■■■□□ 2.4
C5orf56-203ENST00000378953 DEPDC5O75140 1603 aa30.06■■■□□ 2.4
C5orf56-203ENST00000378953 MYO3AQ8NEV4 1616 aa30.02■■■□□ 2.4
C5orf56-203ENST00000378953 CEP152O94986 1710 aa29.99■■■□□ 2.39
C5orf56-203ENST00000378953 ARHGAP31Q2M1Z3 1444 aa29.99■■■□□ 2.39
C5orf56-203ENST00000378953 CEP170BQ9Y4F5 1589 aaPredicted RBP29.98■■■□□ 2.39
C5orf56-203ENST00000378953 CAMSAP1Q5T5Y3 1602 aa29.98■■■□□ 2.39
C5orf56-203ENST00000378953 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
C5orf56-203ENST00000378953 A2ML1A8K2U0 1454 aa29.97■■■□□ 2.39
C5orf56-203ENST00000378953 ZNF142P52746 1687 aaPredicted RBP29.96■■■□□ 2.39
C5orf56-203ENST00000378953 LMTK2Q8IWU2 1503 aa29.96■■■□□ 2.39
C5orf56-203ENST00000378953 ERVK-7P63135 1459 aa29.95■■■□□ 2.39
C5orf56-203ENST00000378953 DMRT2Q9Y5R5 561 aa29.95■■■□□ 2.39
C5orf56-203ENST00000378953 SPATA31D1Q6ZQQ2 1576 aa29.94■■■□□ 2.38
C5orf56-203ENST00000378953 NLRP1Q9C000 1473 aa29.93■■■□□ 2.38
C5orf56-203ENST00000378953 STRCQ7RTU9 1775 aa29.91■■■□□ 2.38
C5orf56-203ENST00000378953 ILDR1Q86SU0 546 aaPredicted RBP29.88■■■□□ 2.37
C5orf56-203ENST00000378953 PLA2R1Q13018 1463 aa29.87■■■□□ 2.37
C5orf56-203ENST00000378953 UNC13BO14795 1591 aa29.86■■■□□ 2.37
C5orf56-203ENST00000378953 PKD2Q13563 968 aa29.85■■■□□ 2.37
C5orf56-203ENST00000378953 THEMISQ8N1K5 641 aaPredicted RBP29.85■■■□□ 2.37
C5orf56-203ENST00000378953 PTPRTO14522 1441 aa29.85■■■□□ 2.37
C5orf56-203ENST00000378953 NCKAP5LQ9HCH0 1330 aa29.84■■■□□ 2.37
C5orf56-203ENST00000378953 EFCAB6Q5THR3 1501 aa29.84■■■□□ 2.37
C5orf56-203ENST00000378953 UGGT1Q9NYU2 1555 aa29.81■■■□□ 2.36
C5orf56-203ENST00000378953 NAIPQ13075 1403 aa29.81■■■□□ 2.36
C5orf56-203ENST00000378953 NUP155O75694 1391 aa29.8■■■□□ 2.36
C5orf56-203ENST00000378953 CFAP65Q6ZU64 1925 aaKnown RBP29.8■■■□□ 2.36
C5orf56-203ENST00000378953 RPRD2Q5VT52 1461 aaKnown RBP29.78■■■□□ 2.36
C5orf56-203ENST00000378953 NOS1P29475 1434 aa29.78■■■□□ 2.36
C5orf56-203ENST00000378953 HFM1A2PYH4 1435 aa29.76■■■□□ 2.35
C5orf56-203ENST00000378953 TET3O43151 1660 aa29.76■■■□□ 2.35
C5orf56-203ENST00000378953 ANKLE2Q86XL3 938 aa29.74■■■□□ 2.35
C5orf56-203ENST00000378953 IQGAP3Q86VI3 1631 aa29.73■■■□□ 2.35
C5orf56-203ENST00000378953 IDI1Q13907 227 aa29.72■■■□□ 2.35
C5orf56-203ENST00000378953 SLC52A1Q9NWF4 448 aa29.7■■■□□ 2.35
C5orf56-203ENST00000378953 SYNMO15061 1565 aa29.69■■■□□ 2.34
C5orf56-203ENST00000378953 GCC2Q8IWJ2 1684 aa29.69■■■□□ 2.34
C5orf56-203ENST00000378953 UBR1Q8IWV7 1749 aa29.66■■■□□ 2.34
C5orf56-203ENST00000378953 STAG3Q9UJ98 1225 aa29.66■■■□□ 2.34
C5orf56-203ENST00000378953 PIK3C2BO00750 1634 aa29.63■■■□□ 2.33
C5orf56-203ENST00000378953 CERKQ8TCT0 537 aa29.63■■■□□ 2.33
C5orf56-203ENST00000378953 NEURL4Q96JN8 1562 aa29.63■■■□□ 2.33
C5orf56-203ENST00000378953 E9PCH4 1651 aa29.63■■■□□ 2.33
C5orf56-203ENST00000378953 MED14O60244 1454 aa29.61■■■□□ 2.33
C5orf56-203ENST00000378953 ARHGAP23Q9P227 1491 aa29.61■■■□□ 2.33
C5orf56-203ENST00000378953 POLR1AO95602 1720 aaPredicted RBP29.6■■■□□ 2.33
C5orf56-203ENST00000378953 FBXO41Q8TF61 875 aa29.6■■■□□ 2.33
C5orf56-203ENST00000378953 TRIM52Q96A61 297 aa29.6■■■□□ 2.33
C5orf56-203ENST00000378953 SLIT1O75093 1534 aa29.6■■■□□ 2.33
C5orf56-203ENST00000378953 NPHP4O75161 1426 aaPredicted RBP29.59■■■□□ 2.33
C5orf56-203ENST00000378953 TXNDC2Q86VQ3 553 aa29.58■■■□□ 2.33
C5orf56-203ENST00000378953 TMEM2Q9UHN6 1383 aa29.58■■■□□ 2.33
C5orf56-203ENST00000378953 LTKP29376 864 aa29.57■■■□□ 2.32
C5orf56-203ENST00000378953 KDM5AP29375 1690 aaKnown RBP29.56■■■□□ 2.32
C5orf56-203ENST00000378953 SCAF11Q99590 1463 aaKnown RBP29.56■■■□□ 2.32
C5orf56-203ENST00000378953 ZNF335Q9H4Z2 1342 aaPredicted RBP29.56■■■□□ 2.32
C5orf56-203ENST00000378953 EID1Q9Y6B2 187 aa29.56■■■□□ 2.32
C5orf56-203ENST00000378953 LTBP4Q8N2S1 1624 aa29.55■■■□□ 2.32
C5orf56-203ENST00000378953 ADGRB3O60242 1522 aa29.55■■■□□ 2.32
C5orf56-203ENST00000378953 SLC4A1APQ9BWU0 796 aaKnown RBP29.49■■■□□ 2.31
C5orf56-203ENST00000378953 CHGAP10645 457 aaKnown RBP29.47■■■□□ 2.31
C5orf56-203ENST00000378953 IQGAP1P46940 1657 aa29.47■■■□□ 2.31
C5orf56-203ENST00000378953 SETD5Q9C0A6 1442 aa29.46■■■□□ 2.31
C5orf56-203ENST00000378953 TMEM131LA2VDJ0 1609 aa29.45■■■□□ 2.3
C5orf56-203ENST00000378953 ACIN1Q9UKV3 1341 aaKnown RBP29.44■■■□□ 2.3
C5orf56-203ENST00000378953 HDGFP51858 240 aaKnown RBP29.42■■■□□ 2.3
C5orf56-203ENST00000378953 ZFYVE9O95405 1425 aa29.41■■■□□ 2.3
C5orf56-203ENST00000378953 SPHKAPQ2M3C7 1700 aa29.41■■■□□ 2.3
C5orf56-203ENST00000378953 RIMS2Q9UQ26 1411 aa29.39■■■□□ 2.3
C5orf56-203ENST00000378953 IQSEC2Q5JU85 1478 aa29.38■■■□□ 2.29
C5orf56-203ENST00000378953 MPHOSPH9Q99550 1183 aa29.38■■■□□ 2.29
C5orf56-203ENST00000378953 TRPM2O94759 1503 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms