RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
RAD50-201ENST00000378823 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
RAD50-201ENST00000378823 CCDC70Q6NSX1 233 aa13.86□□□□□ -0.19
RAD50-201ENST00000378823 TERF2IPQ9NYB0 399 aa13.86□□□□□ -0.19
RAD50-201ENST00000378823 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
RAD50-201ENST00000378823 GPS2Q13227 327 aa13.86□□□□□ -0.19
RAD50-201ENST00000378823 TPM1P09493 284 aa13.85□□□□□ -0.19
RAD50-201ENST00000378823 RAB3GAP2Q9H2M9 1393 aa13.85□□□□□ -0.19
RAD50-201ENST00000378823 PDE3BQ13370 1112 aa13.85□□□□□ -0.19
RAD50-201ENST00000378823 SKOR2Q2VWA4 1001 aaPredicted RBP13.85□□□□□ -0.19
RAD50-201ENST00000378823 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
RAD50-201ENST00000378823 GGT6Q6P531 493 aa13.85□□□□□ -0.19
RAD50-201ENST00000378823 NLRP13Q86W25 1043 aa13.84□□□□□ -0.19
RAD50-201ENST00000378823 NUP155O75694 1391 aa13.84□□□□□ -0.19
RAD50-201ENST00000378823 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.19
RAD50-201ENST00000378823 G3V3G9 751 aa13.83□□□□□ -0.2
RAD50-201ENST00000378823 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
RAD50-201ENST00000378823 CLUAP1Q96AJ1 413 aa13.83□□□□□ -0.2
RAD50-201ENST00000378823 CCAR2Q8N163 923 aaKnown RBP13.83□□□□□ -0.2
RAD50-201ENST00000378823 TPM2P07951 284 aa13.83□□□□□ -0.2
RAD50-201ENST00000378823 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
RAD50-201ENST00000378823 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
RAD50-201ENST00000378823 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
RAD50-201ENST00000378823 BECN2A8MW95 431 aa13.82□□□□□ -0.2
RAD50-201ENST00000378823 MARCH6O60337 910 aa13.82□□□□□ -0.2
RAD50-201ENST00000378823 CENPQQ7L2Z9 268 aaPredicted RBP13.82□□□□□ -0.2
RAD50-201ENST00000378823 VPS53Q5VIR6 699 aa13.82□□□□□ -0.2
RAD50-201ENST00000378823 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
RAD50-201ENST00000378823 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
RAD50-201ENST00000378823 FMN1Q68DA7 1419 aa13.82□□□□□ -0.2
RAD50-201ENST00000378823 DDX49Q9Y6V7 483 aaKnown RBP13.82□□□□□ -0.2
RAD50-201ENST00000378823 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
RAD50-201ENST00000378823 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
RAD50-201ENST00000378823 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
RAD50-201ENST00000378823 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
RAD50-201ENST00000378823 ANKRD30AQ9BXX3 1397 aa13.81□□□□□ -0.2
RAD50-201ENST00000378823 CARMIL2Q6F5E8 1435 aa13.8□□□□□ -0.2
RAD50-201ENST00000378823 GSE1Q14687 1217 aa13.8□□□□□ -0.2
RAD50-201ENST00000378823 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
RAD50-201ENST00000378823 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
RAD50-201ENST00000378823 FAM161AQ3B820 660 aa13.79□□□□□ -0.2
RAD50-201ENST00000378823 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
RAD50-201ENST00000378823 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
RAD50-201ENST00000378823 AMPHP49418 695 aa13.77□□□□□ -0.21
RAD50-201ENST00000378823 TEX35Q5T0J7 233 aa13.77□□□□□ -0.21
RAD50-201ENST00000378823 ANKRD45Q5TZF3 282 aa13.77□□□□□ -0.21
RAD50-201ENST00000378823 ZNF771Q7L3S4 317 aaPredicted RBP13.77□□□□□ -0.21
RAD50-201ENST00000378823 IPO7O95373 1038 aaKnown RBP13.76□□□□□ -0.21
RAD50-201ENST00000378823 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
RAD50-201ENST00000378823 SOGA1O94964 1423 aa13.76□□□□□ -0.21
RAD50-201ENST00000378823 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
RAD50-201ENST00000378823 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
RAD50-201ENST00000378823 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
RAD50-201ENST00000378823 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
RAD50-201ENST00000378823 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
RAD50-201ENST00000378823 GTF2E1P29083 439 aaPredicted RBP13.74□□□□□ -0.21
RAD50-201ENST00000378823 ZNF592Q92610 1267 aa13.74□□□□□ -0.21
RAD50-201ENST00000378823 REC8O95072 547 aa13.74□□□□□ -0.21
RAD50-201ENST00000378823 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
RAD50-201ENST00000378823 NGDNQ8NEJ9 315 aaKnown RBP13.73□□□□□ -0.21
RAD50-201ENST00000378823 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
RAD50-201ENST00000378823 SYNE3Q6ZMZ3 975 aa13.73□□□□□ -0.21
RAD50-201ENST00000378823 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
RAD50-201ENST00000378823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■□□□ 12.4
RAD50-201ENST00000378823 TCEAL9Q9UHQ7 104 aa13.72□□□□□ -0.21
RAD50-201ENST00000378823 PDE4AP27815 886 aa13.72□□□□□ -0.21
RAD50-201ENST00000378823 RUFY2Q8WXA3 655 aa13.72□□□□□ -0.21
RAD50-201ENST00000378823 TRIM29Q14134 588 aa13.71□□□□□ -0.21
RAD50-201ENST00000378823 DIAPH3Q9NSV4 1193 aa13.71□□□□□ -0.21
RAD50-201ENST00000378823 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
RAD50-201ENST00000378823 HOMER1Q86YM7 354 aa13.71□□□□□ -0.22
RAD50-201ENST00000378823 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.22
RAD50-201ENST00000378823 WIZO95785 1651 aa13.7□□□□□ -0.22
RAD50-201ENST00000378823 CCDC9Q9Y3X0 531 aaKnown RBP13.7□□□□□ -0.22
RAD50-201ENST00000378823 E9PSI1 815 aa13.7□□□□□ -0.22
RAD50-201ENST00000378823 ZKSCAN1P17029 563 aaPredicted RBP13.7□□□□□ -0.22
RAD50-201ENST00000378823 PCMTD1Q96MG8 357 aaPredicted RBP13.7□□□□□ -0.22
RAD50-201ENST00000378823 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
RAD50-201ENST00000378823 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
RAD50-201ENST00000378823 VSIG10Q8N0Z9 540 aa13.7□□□□□ -0.22
RAD50-201ENST00000378823 ZBED9Q6R2W3 1325 aa13.69□□□□□ -0.22
RAD50-201ENST00000378823 UACAQ9BZF9 1416 aa13.69□□□□□ -0.22
RAD50-201ENST00000378823 CGNL1Q0VF96 1302 aa13.69□□□□□ -0.22
RAD50-201ENST00000378823 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
RAD50-201ENST00000378823 ZKSCAN2Q63HK3 967 aa13.69□□□□□ -0.22
RAD50-201ENST00000378823 KANK4Q5T7N3 995 aaPredicted RBP13.68□□□□□ -0.22
RAD50-201ENST00000378823 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
RAD50-201ENST00000378823 ROCK1Q13464 1354 aa13.68□□□□□ -0.22
RAD50-201ENST00000378823 RRP12Q5JTH9 1297 aaKnown RBP13.68□□□□□ -0.22
RAD50-201ENST00000378823 L3MBTL2Q969R5 705 aa13.68□□□□□ -0.22
RAD50-201ENST00000378823 LTV1Q96GA3 475 aaPredicted RBP13.68□□□□□ -0.22
RAD50-201ENST00000378823 RRP7AQ9Y3A4 280 aaKnown RBP13.68□□□□□ -0.22
RAD50-201ENST00000378823 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
RAD50-201ENST00000378823 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
RAD50-201ENST00000378823 CCDC47Q96A33 483 aaKnown RBP13.67□□□□□ -0.22
RAD50-201ENST00000378823 CCDC144AA2RUR9 1427 aa13.67□□□□□ -0.22
RAD50-201ENST00000378823 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
RAD50-201ENST00000378823 C9orf78Q9NZ63 289 aaPredicted RBP13.67□□□□□ -0.22
RAD50-201ENST00000378823 C1orf141Q5JVX7 400 aa13.67□□□□□ -0.22
RAD50-201ENST00000378823 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms