RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.49
OPTN-204ENST00000378752 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
OPTN-204ENST00000378752 TMF1P82094 1093 aa11.95□□□□□ -0.5
OPTN-204ENST00000378752 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
OPTN-204ENST00000378752 CTTNBP2Q8WZ74 1663 aa11.95□□□□□ -0.5
OPTN-204ENST00000378752 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
OPTN-204ENST00000378752 ANKRD50Q9ULJ7 1429 aa11.94□□□□□ -0.5
OPTN-204ENST00000378752 BRD4O60885 1362 aaPredicted RBP11.94□□□□□ -0.5
OPTN-204ENST00000378752 APAF1O14727 1248 aa11.94□□□□□ -0.5
OPTN-204ENST00000378752 KIAA1107Q9UPP5 1409 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
OPTN-204ENST00000378752 BCAR3O75815 825 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 MS4A1P11836 297 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
OPTN-204ENST00000378752 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 USP35Q9P2H5 1018 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 SPATA31E1Q6ZUB1 1445 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 MIA2Q96PC5 1412 aa11.92□□□□□ -0.5
OPTN-204ENST00000378752 CUL7Q14999 1698 aa11.91□□□□□ -0.5
OPTN-204ENST00000378752 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
OPTN-204ENST00000378752 HECW1Q76N89 1606 aa11.9□□□□□ -0.51
OPTN-204ENST00000378752 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.51
OPTN-204ENST00000378752 PANK1Q8TE04 598 aa11.9□□□□□ -0.51
OPTN-204ENST00000378752 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
OPTN-204ENST00000378752 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
OPTN-204ENST00000378752 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
OPTN-204ENST00000378752 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
OPTN-204ENST00000378752 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
OPTN-204ENST00000378752 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
OPTN-204ENST00000378752 BCORL1Q5H9F3 1711 aa11.86□□□□□ -0.51
OPTN-204ENST00000378752 POGKQ9P215 609 aa11.86□□□□□ -0.51
OPTN-204ENST00000378752 PLB1Q6P1J6 1458 aa11.86□□□□□ -0.51
OPTN-204ENST00000378752 PZPP20742 1482 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 BECN1Q14457 450 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 CAMSAP2Q08AD1 1489 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
OPTN-204ENST00000378752 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
OPTN-204ENST00000378752 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
OPTN-204ENST00000378752 TCOF1Q13428 1488 aaKnown RBP11.84□□□□□ -0.51
OPTN-204ENST00000378752 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
OPTN-204ENST00000378752 SAFB2Q14151 953 aaKnown RBP eCLIP11.84□□□□□ -0.51
OPTN-204ENST00000378752 GCC2Q8IWJ2 1684 aa11.83□□□□□ -0.52
OPTN-204ENST00000378752 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
OPTN-204ENST00000378752 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
OPTN-204ENST00000378752 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
OPTN-204ENST00000378752 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
OPTN-204ENST00000378752 LRPPRCP42704 1394 aaKnown RBP11.81□□□□□ -0.52
OPTN-204ENST00000378752 C9orf84Q5VXU9 1444 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 SEC24BO95487 1268 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
OPTN-204ENST00000378752 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
OPTN-204ENST00000378752 SAMD9Q5K651 1589 aa11.81□□□□□ -0.52
OPTN-204ENST00000378752 IGHDP01880 384 aa11.8□□□□□ -0.52
OPTN-204ENST00000378752 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
OPTN-204ENST00000378752 TROQ12816 1431 aaPredicted RBP11.8□□□□□ -0.52
OPTN-204ENST00000378752 PBRM1Q86U86 1689 aa11.8□□□□□ -0.52
OPTN-204ENST00000378752 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
OPTN-204ENST00000378752 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
OPTN-204ENST00000378752 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
OPTN-204ENST00000378752 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
OPTN-204ENST00000378752 ARHGEF11O15085 1522 aa11.79□□□□□ -0.52
OPTN-204ENST00000378752 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
OPTN-204ENST00000378752 NUP153P49790 1475 aaKnown RBP11.78□□□□□ -0.52
OPTN-204ENST00000378752 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
OPTN-204ENST00000378752 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
OPTN-204ENST00000378752 MORC1Q86VD1 984 aa11.77□□□□□ -0.53
OPTN-204ENST00000378752 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
OPTN-204ENST00000378752 PARD3Q8TEW0 1356 aa11.76□□□□□ -0.53
OPTN-204ENST00000378752 TESK2Q96S53 571 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 TRAK1Q9UPV9 953 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 KIAA0586Q9BVV6 1533 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 ERBINQ96RT1 1412 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 RALGAPBQ86X10 1494 aa11.75□□□□□ -0.53
OPTN-204ENST00000378752 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 U2AF1L5P0DN76 240 aaPredicted RBP11.74□□□□□ -0.53
OPTN-204ENST00000378752 U2AF1Q01081 240 aaKnown RBP eCLIP11.74□□□□□ -0.53
OPTN-204ENST00000378752 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
OPTN-204ENST00000378752 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
OPTN-204ENST00000378752 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 CFAP70Q5T0N1 1121 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 KDM5CP41229 1560 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
OPTN-204ENST00000378752 E9PSI1 815 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
OPTN-204ENST00000378752 ARID3AQ99856 593 aa11.72□□□□□ -0.53
OPTN-204ENST00000378752 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.53
OPTN-204ENST00000378752 KDM2BQ8NHM5 1336 aa11.71□□□□□ -0.53
OPTN-204ENST00000378752 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.54
OPTN-204ENST00000378752 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
OPTN-204ENST00000378752 KIF14Q15058 1648 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms