RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 DCAF11Q8TEB1 546 aa22.37■■□□□ 1.17
PCDHA1-201ENST00000378133 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
PCDHA1-201ENST00000378133 RALGAPBQ86X10 1494 aa22.36■■□□□ 1.17
PCDHA1-201ENST00000378133 SHANK2Q9UPX8 1470 aa22.36■■□□□ 1.17
PCDHA1-201ENST00000378133 SMG6Q86US8 1419 aaKnown RBP22.35■■□□□ 1.17
PCDHA1-201ENST00000378133 KIF15Q9NS87 1388 aa22.35■■□□□ 1.17
PCDHA1-201ENST00000378133 TMC1Q8TDI8 760 aa22.35■■□□□ 1.17
PCDHA1-201ENST00000378133 ANP32AP39687 249 aaKnown RBP22.34■■□□□ 1.17
PCDHA1-201ENST00000378133 PNISRQ8TF01 805 aaKnown RBP22.34■■□□□ 1.17
PCDHA1-201ENST00000378133 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
PCDHA1-201ENST00000378133 CCDC136Q96JN2 1154 aa22.33■■□□□ 1.16
PCDHA1-201ENST00000378133 IPO9Q96P70 1041 aaKnown RBP22.33■■□□□ 1.16
PCDHA1-201ENST00000378133 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.16
PCDHA1-201ENST00000378133 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
PCDHA1-201ENST00000378133 ARHGEF12Q9NZN5 1544 aa22.3■■□□□ 1.16
PCDHA1-201ENST00000378133 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
PCDHA1-201ENST00000378133 KDM5DQ9BY66 1539 aa22.29■■□□□ 1.16
PCDHA1-201ENST00000378133 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
PCDHA1-201ENST00000378133 RTL5Q5HYW3 569 aaPredicted RBP22.28■■□□□ 1.16
PCDHA1-201ENST00000378133 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
PCDHA1-201ENST00000378133 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
PCDHA1-201ENST00000378133 ARHGEF5Q12774 1597 aa22.23■■□□□ 1.15
PCDHA1-201ENST00000378133 RGL3Q3MIN7 710 aa22.22■■□□□ 1.15
PCDHA1-201ENST00000378133 MYBBP1AQ9BQG0 1328 aaKnown RBP22.21■■□□□ 1.15
PCDHA1-201ENST00000378133 CCDC141Q6ZP82 1450 aa22.2■■□□□ 1.15
PCDHA1-201ENST00000378133 RALBP1Q15311 655 aa22.2■■□□□ 1.14
PCDHA1-201ENST00000378133 FAM135AQ9P2D6 1515 aa22.2■■□□□ 1.14
PCDHA1-201ENST00000378133 SAMD9LQ8IVG5 1584 aa22.19■■□□□ 1.14
PCDHA1-201ENST00000378133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
PCDHA1-201ENST00000378133 RSPH4AQ5TD94 716 aa22.19■■□□□ 1.14
PCDHA1-201ENST00000378133 BRD4O60885 1362 aaPredicted RBP22.18■■□□□ 1.14
PCDHA1-201ENST00000378133 LRPPRCP42704 1394 aaKnown RBP22.18■■□□□ 1.14
PCDHA1-201ENST00000378133 CDC42BPBQ9Y5S2 1711 aa22.18■■□□□ 1.14
PCDHA1-201ENST00000378133 NBPF1Q3BBV0 1214 aa22.18■■□□□ 1.14
PCDHA1-201ENST00000378133 CCDC144AA2RUR9 1427 aa22.17■■□□□ 1.14
PCDHA1-201ENST00000378133 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
PCDHA1-201ENST00000378133 PRAG1Q86YV5 1406 aa22.14■■□□□ 1.14
PCDHA1-201ENST00000378133 TTC37Q6PGP7 1564 aa22.14■■□□□ 1.13
PCDHA1-201ENST00000378133 UBE2Q2Q8WVN8 375 aa22.14■■□□□ 1.13
PCDHA1-201ENST00000378133 PREX2Q70Z35 1606 aa22.13■■□□□ 1.13
PCDHA1-201ENST00000378133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.13■■□□□ 1.13
PCDHA1-201ENST00000378133 SYCP2Q9BX26 1530 aa22.11■■□□□ 1.13
PCDHA1-201ENST00000378133 PLA2R1Q13018 1463 aa22.1■■□□□ 1.13
PCDHA1-201ENST00000378133 E9PCH4 1651 aa22.1■■□□□ 1.13
PCDHA1-201ENST00000378133 NLRP13Q86W25 1043 aa22.09■■□□□ 1.13
PCDHA1-201ENST00000378133 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
PCDHA1-201ENST00000378133 PER1O15534 1290 aaPredicted RBP22.09■■□□□ 1.13
PCDHA1-201ENST00000378133 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.12
PCDHA1-201ENST00000378133 NPM2Q86SE8 214 aaKnown RBP22.07■■□□□ 1.12
PCDHA1-201ENST00000378133 PARD3Q8TEW0 1356 aa22.07■■□□□ 1.12
PCDHA1-201ENST00000378133 A2MP01023 1474 aa22.06■■□□□ 1.12
PCDHA1-201ENST00000378133 PLEKHH2Q8IVE3 1493 aa22.05■■□□□ 1.12
PCDHA1-201ENST00000378133 CC2D1BQ5T0F9 858 aaKnown RBP22.04■■□□□ 1.12
PCDHA1-201ENST00000378133 TESK2Q96S53 571 aa22.04■■□□□ 1.12
PCDHA1-201ENST00000378133 RRP1P56182 461 aaKnown RBP22.03■■□□□ 1.12
PCDHA1-201ENST00000378133 GPRASP1Q5JY77 1395 aa22.03■■□□□ 1.12
PCDHA1-201ENST00000378133 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
PCDHA1-201ENST00000378133 IL27Q8NEV9 243 aa22.02■■□□□ 1.12
PCDHA1-201ENST00000378133 RCAN3Q9UKA8 241 aa22.02■■□□□ 1.12
PCDHA1-201ENST00000378133 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
PCDHA1-201ENST00000378133 DISP3Q9P2K9 1392 aa22.02■■□□□ 1.12
PCDHA1-201ENST00000378133 TCERG1O14776 1098 aaKnown RBP22.01■■□□□ 1.11
PCDHA1-201ENST00000378133 UNC13BO14795 1591 aa22.01■■□□□ 1.11
PCDHA1-201ENST00000378133 PANK3Q9H999 370 aa22.01■■□□□ 1.11
PCDHA1-201ENST00000378133 EXOC6Q8TAG9 804 aa22■■□□□ 1.11
PCDHA1-201ENST00000378133 MAST1Q9Y2H9 1570 aa22■■□□□ 1.11
PCDHA1-201ENST00000378133 NEFMP07197 916 aa21.99■■□□□ 1.11
PCDHA1-201ENST00000378133 ASXL2Q76L83 1435 aa21.99■■□□□ 1.11
PCDHA1-201ENST00000378133 RIMBP3CA6NJZ7 1639 aa21.99■■□□□ 1.11
PCDHA1-201ENST00000378133 RIMBP3BA6NNM3 1639 aa21.99■■□□□ 1.11
PCDHA1-201ENST00000378133 RIMBP3Q9UFD9 1639 aa21.99■■□□□ 1.11
PCDHA1-201ENST00000378133 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
PCDHA1-201ENST00000378133 COL17A1Q9UMD9 1497 aaPredicted RBP21.98■■□□□ 1.11
PCDHA1-201ENST00000378133 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
PCDHA1-201ENST00000378133 PDE4AP27815 886 aa21.98■■□□□ 1.11
PCDHA1-201ENST00000378133 USP35Q9P2H5 1018 aa21.98■■□□□ 1.11
PCDHA1-201ENST00000378133 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.97■■□□□ 1.11
PCDHA1-201ENST00000378133 PDE3BQ13370 1112 aa21.97■■□□□ 1.11
PCDHA1-201ENST00000378133 PRDM15P57071 1507 aaPredicted RBP21.96■■□□□ 1.11
PCDHA1-201ENST00000378133 TMF1P82094 1093 aa21.96■■□□□ 1.11
PCDHA1-201ENST00000378133 WASHC2CQ9Y4E1 1318 aa21.96■■□□□ 1.11
PCDHA1-201ENST00000378133 ERBINQ96RT1 1412 aa21.96■■□□□ 1.11
PCDHA1-201ENST00000378133 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
PCDHA1-201ENST00000378133 RTN4Q9NQC3 1192 aaKnown RBP21.94■■□□□ 1.1
PCDHA1-201ENST00000378133 PLCH2O75038 1416 aa21.94■■□□□ 1.1
PCDHA1-201ENST00000378133 PLXNC1O60486 1568 aa21.93■■□□□ 1.1
PCDHA1-201ENST00000378133 BACH2Q9BYV9 841 aa21.93■■□□□ 1.1
PCDHA1-201ENST00000378133 DUOX2Q9NRD8 1548 aa21.92■■□□□ 1.1
PCDHA1-201ENST00000378133 LAMC1P11047 1609 aa21.91■■□□□ 1.1
PCDHA1-201ENST00000378133 NPM1P06748 294 aaKnown RBP eCLIP21.91■■□□□ 1.1
PCDHA1-201ENST00000378133 ABCA9Q8IUA7 1624 aa21.9■■□□□ 1.1
PCDHA1-201ENST00000378133 MS4A1P11836 297 aa21.9■■□□□ 1.1
PCDHA1-201ENST00000378133 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
PCDHA1-201ENST00000378133 ATP10AO60312 1499 aa21.9■■□□□ 1.1
PCDHA1-201ENST00000378133 CYB5RLQ6IPT4 315 aa21.89■■□□□ 1.1
PCDHA1-201ENST00000378133 EFCAB2Q5VUJ9 269 aa21.89■■□□□ 1.09
PCDHA1-201ENST00000378133 EIF2AK4Q9P2K8 1649 aaKnown RBP21.89■■□□□ 1.09
PCDHA1-201ENST00000378133 PLIN1O60240 522 aa21.87■■□□□ 1.09
PCDHA1-201ENST00000378133 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
PCDHA1-201ENST00000378133 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms