RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
SSH3-203ENST00000376757 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
SSH3-203ENST00000376757 RALBP1Q15311 655 aa20.95■□□□□ 0.94
SSH3-203ENST00000376757 LRPPRCP42704 1394 aaKnown RBP20.95■□□□□ 0.94
SSH3-203ENST00000376757 NLRP13Q86W25 1043 aa20.94■□□□□ 0.94
SSH3-203ENST00000376757 KIAA0586Q9BVV6 1533 aa20.94■□□□□ 0.94
SSH3-203ENST00000376757 BRD4O60885 1362 aaPredicted RBP20.94■□□□□ 0.94
SSH3-203ENST00000376757 PANK3Q9H999 370 aa20.92■□□□□ 0.94
SSH3-203ENST00000376757 KTN1Q86UP2 1357 aaKnown RBP20.92■□□□□ 0.94
SSH3-203ENST00000376757 BACH2Q9BYV9 841 aa20.91■□□□□ 0.94
SSH3-203ENST00000376757 C9orf84Q5VXU9 1444 aa20.91■□□□□ 0.94
SSH3-203ENST00000376757 RALGAPBQ86X10 1494 aa20.91■□□□□ 0.94
SSH3-203ENST00000376757 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
SSH3-203ENST00000376757 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
SSH3-203ENST00000376757 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.94
SSH3-203ENST00000376757 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.94
SSH3-203ENST00000376757 PER1O15534 1290 aaPredicted RBP20.86■□□□□ 0.93
SSH3-203ENST00000376757 DISP3Q9P2K9 1392 aa20.86■□□□□ 0.93
SSH3-203ENST00000376757 GRIN2AQ12879 1464 aa20.86■□□□□ 0.93
SSH3-203ENST00000376757 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
SSH3-203ENST00000376757 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.93
SSH3-203ENST00000376757 UHRF1BP1Q6BDS2 1440 aa20.83■□□□□ 0.93
SSH3-203ENST00000376757 RGS3P49796 1198 aa20.82■□□□□ 0.92
SSH3-203ENST00000376757 PARD3Q8TEW0 1356 aa20.8■□□□□ 0.92
SSH3-203ENST00000376757 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
SSH3-203ENST00000376757 CCDC146Q8IYE0 955 aa20.8■□□□□ 0.92
SSH3-203ENST00000376757 ADGRL2O95490 1459 aa20.8■□□□□ 0.92
SSH3-203ENST00000376757 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
SSH3-203ENST00000376757 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.78■□□□□ 0.92
SSH3-203ENST00000376757 TESK2Q96S53 571 aa20.77■□□□□ 0.92
SSH3-203ENST00000376757 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
SSH3-203ENST00000376757 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
SSH3-203ENST00000376757 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
SSH3-203ENST00000376757 BRPF3Q9ULD4 1205 aa20.73■□□□□ 0.91
SSH3-203ENST00000376757 PRAG1Q86YV5 1406 aa20.73■□□□□ 0.91
SSH3-203ENST00000376757 ATP10BO94823 1461 aa20.72■□□□□ 0.91
SSH3-203ENST00000376757 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
SSH3-203ENST00000376757 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
SSH3-203ENST00000376757 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
SSH3-203ENST00000376757 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
SSH3-203ENST00000376757 DAXXQ9UER7 740 aaPredicted RBP20.71■□□□□ 0.91
SSH3-203ENST00000376757 MS4A1P11836 297 aa20.71■□□□□ 0.91
SSH3-203ENST00000376757 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
SSH3-203ENST00000376757 TMF1P82094 1093 aa20.7■□□□□ 0.9
SSH3-203ENST00000376757 CARMIL2Q6F5E8 1435 aa20.7■□□□□ 0.9
SSH3-203ENST00000376757 CDC42BPAQ5VT25 1732 aa20.7■□□□□ 0.9
SSH3-203ENST00000376757 PLEKHH1Q9ULM0 1364 aa20.7■□□□□ 0.9
SSH3-203ENST00000376757 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
SSH3-203ENST00000376757 KNSTRNQ9Y448 316 aa20.68■□□□□ 0.9
SSH3-203ENST00000376757 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
SSH3-203ENST00000376757 NFKBIBQ15653 356 aa20.67■□□□□ 0.9
SSH3-203ENST00000376757 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
SSH3-203ENST00000376757 KDM5DQ9BY66 1539 aa20.67■□□□□ 0.9
SSH3-203ENST00000376757 ERBINQ96RT1 1412 aa20.66■□□□□ 0.9
SSH3-203ENST00000376757 A2MP01023 1474 aa20.66■□□□□ 0.9
SSH3-203ENST00000376757 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
SSH3-203ENST00000376757 PLA2R1Q13018 1463 aa20.65■□□□□ 0.9
SSH3-203ENST00000376757 ABCC10Q5T3U5 1492 aa20.65■□□□□ 0.9
SSH3-203ENST00000376757 BCAR3O75815 825 aa20.65■□□□□ 0.9
SSH3-203ENST00000376757 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
SSH3-203ENST00000376757 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.9
SSH3-203ENST00000376757 E9PCH4 1651 aa20.63■□□□□ 0.89
SSH3-203ENST00000376757 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
SSH3-203ENST00000376757 APAF1O14727 1248 aa20.62■□□□□ 0.89
SSH3-203ENST00000376757 NEUROD2Q15784 382 aa20.62■□□□□ 0.89
SSH3-203ENST00000376757 FRAT1Q92837 279 aaPredicted RBP20.61■□□□□ 0.89
SSH3-203ENST00000376757 DMRT2Q9Y5R5 561 aa20.61■□□□□ 0.89
SSH3-203ENST00000376757 PLEKHH2Q8IVE3 1493 aa20.61■□□□□ 0.89
SSH3-203ENST00000376757 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
SSH3-203ENST00000376757 GOLGA2Q08379 1002 aa20.61■□□□□ 0.89
SSH3-203ENST00000376757 FRAT2O75474 233 aaPredicted RBP20.6■□□□□ 0.89
SSH3-203ENST00000376757 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
SSH3-203ENST00000376757 C8orf34Q49A92 452 aa20.6■□□□□ 0.89
SSH3-203ENST00000376757 PTPRGP23470 1445 aa20.6■□□□□ 0.89
SSH3-203ENST00000376757 KDM2BQ8NHM5 1336 aa20.6■□□□□ 0.89
SSH3-203ENST00000376757 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
SSH3-203ENST00000376757 BLMP54132 1417 aaPredicted RBP20.59■□□□□ 0.89
SSH3-203ENST00000376757 TRPM1Q7Z4N2 1603 aa20.59■□□□□ 0.89
SSH3-203ENST00000376757 SYNJ2O15056 1496 aa20.58■□□□□ 0.88
SSH3-203ENST00000376757 GSE1Q14687 1217 aa20.57■□□□□ 0.88
SSH3-203ENST00000376757 ADCY10Q96PN6 1610 aa20.57■□□□□ 0.88
SSH3-203ENST00000376757 CCDC141Q6ZP82 1450 aa20.57■□□□□ 0.88
SSH3-203ENST00000376757 MAGI2Q86UL8 1455 aa20.57■□□□□ 0.88
SSH3-203ENST00000376757 SHANK2Q9UPX8 1470 aa20.56■□□□□ 0.88
SSH3-203ENST00000376757 CENPQQ7L2Z9 268 aaPredicted RBP20.56■□□□□ 0.88
SSH3-203ENST00000376757 USP35Q9P2H5 1018 aa20.56■□□□□ 0.88
SSH3-203ENST00000376757 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
SSH3-203ENST00000376757 ARXQ96QS3 562 aa20.56■□□□□ 0.88
SSH3-203ENST00000376757 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
SSH3-203ENST00000376757 SYCP2Q9BX26 1530 aa20.56■□□□□ 0.88
SSH3-203ENST00000376757 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
SSH3-203ENST00000376757 RRP7AQ9Y3A4 280 aaKnown RBP20.54■□□□□ 0.88
SSH3-203ENST00000376757 ABCA8O94911 1581 aa20.53■□□□□ 0.88
SSH3-203ENST00000376757 SAMD9LQ8IVG5 1584 aa20.53■□□□□ 0.88
SSH3-203ENST00000376757 IGHDP01880 384 aa20.53■□□□□ 0.88
SSH3-203ENST00000376757 PANK1Q8TE04 598 aa20.52■□□□□ 0.88
SSH3-203ENST00000376757 ZMYM4Q5VZL5 1548 aa20.52■□□□□ 0.88
SSH3-203ENST00000376757 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.87
SSH3-203ENST00000376757 SEC24BO95487 1268 aa20.51■□□□□ 0.87
SSH3-203ENST00000376757 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms