RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CROCC2H7BZ55 1655 aa21.87■■□□□ 1.09
TRIM39-201ENST00000376656 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
TRIM39-201ENST00000376656 KIAA0586Q9BVV6 1533 aa21.87■■□□□ 1.09
TRIM39-201ENST00000376656 GPATCH8Q9UKJ3 1502 aaKnown RBP21.87■■□□□ 1.09
TRIM39-201ENST00000376656 ARHGEF12Q9NZN5 1544 aa21.86■■□□□ 1.09
TRIM39-201ENST00000376656 WASHC2CQ9Y4E1 1318 aa21.86■■□□□ 1.09
TRIM39-201ENST00000376656 TROQ12816 1431 aaPredicted RBP21.86■■□□□ 1.09
TRIM39-201ENST00000376656 ITSN2Q9NZM3 1697 aa21.85■■□□□ 1.09
TRIM39-201ENST00000376656 NUP155O75694 1391 aa21.85■■□□□ 1.09
TRIM39-201ENST00000376656 PARD3Q8TEW0 1356 aa21.85■■□□□ 1.09
TRIM39-201ENST00000376656 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
TRIM39-201ENST00000376656 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
TRIM39-201ENST00000376656 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
TRIM39-201ENST00000376656 DDRGK1Q96HY6 314 aa21.79■■□□□ 1.08
TRIM39-201ENST00000376656 PER1O15534 1290 aaPredicted RBP21.77■■□□□ 1.08
TRIM39-201ENST00000376656 CEP170Q5SW79 1584 aa21.77■■□□□ 1.08
TRIM39-201ENST00000376656 SLC4A3P48751 1232 aa21.76■■□□□ 1.07
TRIM39-201ENST00000376656 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
TRIM39-201ENST00000376656 C20orf194Q5TEA3 1177 aa21.75■■□□□ 1.07
TRIM39-201ENST00000376656 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
TRIM39-201ENST00000376656 BLMP54132 1417 aaPredicted RBP21.74■■□□□ 1.07
TRIM39-201ENST00000376656 ADCY10Q96PN6 1610 aa21.73■■□□□ 1.07
TRIM39-201ENST00000376656 NFKBIBQ15653 356 aa21.73■■□□□ 1.07
TRIM39-201ENST00000376656 PLB1Q6P1J6 1458 aa21.73■■□□□ 1.07
TRIM39-201ENST00000376656 GSE1Q14687 1217 aa21.73■■□□□ 1.07
TRIM39-201ENST00000376656 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.72■■□□□ 1.07
TRIM39-201ENST00000376656 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
TRIM39-201ENST00000376656 KDM5DQ9BY66 1539 aa21.71■■□□□ 1.07
TRIM39-201ENST00000376656 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
TRIM39-201ENST00000376656 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
TRIM39-201ENST00000376656 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
TRIM39-201ENST00000376656 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
TRIM39-201ENST00000376656 TRPM1Q7Z4N2 1603 aa21.69■■□□□ 1.06
TRIM39-201ENST00000376656 PRAG1Q86YV5 1406 aa21.68■■□□□ 1.06
TRIM39-201ENST00000376656 SHANK2Q9UPX8 1470 aa21.66■■□□□ 1.06
TRIM39-201ENST00000376656 PTPRGP23470 1445 aa21.66■■□□□ 1.06
TRIM39-201ENST00000376656 ZMYM4Q5VZL5 1548 aa21.66■■□□□ 1.06
TRIM39-201ENST00000376656 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
TRIM39-201ENST00000376656 FRAT1Q92837 279 aaPredicted RBP21.66■■□□□ 1.06
TRIM39-201ENST00000376656 INSRP06213 1382 aa21.65■■□□□ 1.06
TRIM39-201ENST00000376656 PANK3Q9H999 370 aa21.65■■□□□ 1.06
TRIM39-201ENST00000376656 COL17A1Q9UMD9 1497 aaPredicted RBP21.64■■□□□ 1.06
TRIM39-201ENST00000376656 RGL3Q3MIN7 710 aa21.64■■□□□ 1.05
TRIM39-201ENST00000376656 TSPY4P0CV99 314 aa21.63■■□□□ 1.05
TRIM39-201ENST00000376656 TSPY10P0CW01 314 aa21.63■■□□□ 1.05
TRIM39-201ENST00000376656 DAXXQ9UER7 740 aaPredicted RBP21.63■■□□□ 1.05
TRIM39-201ENST00000376656 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
TRIM39-201ENST00000376656 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
TRIM39-201ENST00000376656 C8orf34Q49A92 452 aa21.62■■□□□ 1.05
TRIM39-201ENST00000376656 CENPQQ7L2Z9 268 aaPredicted RBP21.62■■□□□ 1.05
TRIM39-201ENST00000376656 TESK2Q96S53 571 aa21.62■■□□□ 1.05
TRIM39-201ENST00000376656 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
TRIM39-201ENST00000376656 FAM161AQ3B820 660 aa21.6■■□□□ 1.05
TRIM39-201ENST00000376656 HNRNPMP52272 730 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRIM39-201ENST00000376656 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
TRIM39-201ENST00000376656 GPRASP1Q5JY77 1395 aa21.59■■□□□ 1.05
TRIM39-201ENST00000376656 FAM135AQ9P2D6 1515 aa21.59■■□□□ 1.05
TRIM39-201ENST00000376656 ABCC10Q5T3U5 1492 aa21.59■■□□□ 1.05
TRIM39-201ENST00000376656 CCDC144AA2RUR9 1427 aa21.58■■□□□ 1.05
TRIM39-201ENST00000376656 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.05
TRIM39-201ENST00000376656 PLEKHH1Q9ULM0 1364 aa21.58■■□□□ 1.04
TRIM39-201ENST00000376656 DUSP27Q5VZP5 1158 aa21.57■■□□□ 1.04
TRIM39-201ENST00000376656 ERBINQ96RT1 1412 aa21.56■■□□□ 1.04
TRIM39-201ENST00000376656 PLEKHD1A6NEE1 506 aa21.56■■□□□ 1.04
TRIM39-201ENST00000376656 PRDM15P57071 1507 aaPredicted RBP21.55■■□□□ 1.04
TRIM39-201ENST00000376656 A2MP01023 1474 aa21.55■■□□□ 1.04
TRIM39-201ENST00000376656 IFT140Q96RY7 1462 aa21.55■■□□□ 1.04
TRIM39-201ENST00000376656 FRAT2O75474 233 aaPredicted RBP21.55■■□□□ 1.04
TRIM39-201ENST00000376656 RGS3P49796 1198 aa21.54■■□□□ 1.04
TRIM39-201ENST00000376656 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.04
TRIM39-201ENST00000376656 TMF1P82094 1093 aa21.52■■□□□ 1.03
TRIM39-201ENST00000376656 PLA2R1Q13018 1463 aa21.52■■□□□ 1.03
TRIM39-201ENST00000376656 LAMC1P11047 1609 aa21.51■■□□□ 1.03
TRIM39-201ENST00000376656 ZNF521Q96K83 1311 aa21.49■■□□□ 1.03
TRIM39-201ENST00000376656 WDR43Q15061 677 aaKnown RBP eCLIP21.49■■□□□ 1.03
TRIM39-201ENST00000376656 GOLGA2Q08379 1002 aa21.49■■□□□ 1.03
TRIM39-201ENST00000376656 ARHGEF5Q12774 1597 aa21.48■■□□□ 1.03
TRIM39-201ENST00000376656 PPP2R1AP30153 589 aa21.48■■□□□ 1.03
TRIM39-201ENST00000376656 ATP10BO94823 1461 aa21.48■■□□□ 1.03
TRIM39-201ENST00000376656 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.47■■□□□ 1.03
TRIM39-201ENST00000376656 ABCA8O94911 1581 aa21.47■■□□□ 1.03
TRIM39-201ENST00000376656 MYO5CQ9NQX4 1742 aa21.46■■□□□ 1.03
TRIM39-201ENST00000376656 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
TRIM39-201ENST00000376656 MAGI2Q86UL8 1455 aa21.46■■□□□ 1.03
TRIM39-201ENST00000376656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■■■□ 21.3
TRIM39-201ENST00000376656 CHMP7Q8WUX9 453 aaPredicted RBP21.45■■□□□ 1.02
TRIM39-201ENST00000376656 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
TRIM39-201ENST00000376656 CCDC141Q6ZP82 1450 aa21.44■■□□□ 1.02
TRIM39-201ENST00000376656 SLFN5Q08AF3 891 aa21.44■■□□□ 1.02
TRIM39-201ENST00000376656 KNSTRNQ9Y448 316 aa21.42■■□□□ 1.02
TRIM39-201ENST00000376656 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
TRIM39-201ENST00000376656 FBLN2P98095 1184 aa21.42■■□□□ 1.02
TRIM39-201ENST00000376656 EIF2AK4Q9P2K8 1649 aaKnown RBP21.42■■□□□ 1.02
TRIM39-201ENST00000376656 SAMD9LQ8IVG5 1584 aa21.41■■□□□ 1.02
TRIM39-201ENST00000376656 SYNJ2O15056 1496 aa21.41■■□□□ 1.02
TRIM39-201ENST00000376656 SPINK5Q9NQ38 1064 aaPredicted RBP21.41■■□□□ 1.02
TRIM39-201ENST00000376656 CCDC146Q8IYE0 955 aa21.4■■□□□ 1.02
TRIM39-201ENST00000376656 AMER1Q5JTC6 1135 aaPredicted RBP21.4■■□□□ 1.02
TRIM39-201ENST00000376656 USP19O94966 1318 aa21.39■■□□□ 1.01
TRIM39-201ENST00000376656 BCAR3O75815 825 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms