RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.63
CTTN-203ENST00000376561 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
CTTN-203ENST00000376561 MLH3Q9UHC1 1453 aa25.18■■□□□ 1.62
CTTN-203ENST00000376561 HECW2Q9P2P5 1572 aa25.17■■□□□ 1.62
CTTN-203ENST00000376561 FAM69CQ0P6D2 419 aa25.16■■□□□ 1.62
CTTN-203ENST00000376561 PLA2R1Q13018 1463 aa25.13■■□□□ 1.61
CTTN-203ENST00000376561 KIF3BO15066 747 aa25.13■■□□□ 1.61
CTTN-203ENST00000376561 NBPF8Q3BBV2 869 aa25.13■■□□□ 1.61
CTTN-203ENST00000376561 A2MP01023 1474 aa25.12■■□□□ 1.61
CTTN-203ENST00000376561 HIRIP3Q9BW71 556 aaPredicted RBP25.12■■□□□ 1.61
CTTN-203ENST00000376561 CCDC144AA2RUR9 1427 aa25.11■■□□□ 1.61
CTTN-203ENST00000376561 VWDEQ8N2E2 1590 aa25.11■■□□□ 1.61
CTTN-203ENST00000376561 RAPGEF3O95398 923 aa25.1■■□□□ 1.61
CTTN-203ENST00000376561 RICTORQ6R327 1708 aa25.1■■□□□ 1.61
CTTN-203ENST00000376561 ATP10AO60312 1499 aa25.1■■□□□ 1.61
CTTN-203ENST00000376561 PRDM15P57071 1507 aaPredicted RBP25.09■■□□□ 1.61
CTTN-203ENST00000376561 MROH1Q8NDA8 1641 aa25.09■■□□□ 1.61
CTTN-203ENST00000376561 KANK1Q14678 1352 aa25.09■■□□□ 1.61
CTTN-203ENST00000376561 E9PCH4 1651 aa25.09■■□□□ 1.61
CTTN-203ENST00000376561 ABCA6Q8N139 1617 aa25.07■■□□□ 1.6
CTTN-203ENST00000376561 MIER1Q8N108 512 aa25.07■■□□□ 1.6
CTTN-203ENST00000376561 TET3O43151 1660 aa25.07■■□□□ 1.6
CTTN-203ENST00000376561 FRMPD1Q5SYB0 1578 aa25.06■■□□□ 1.6
CTTN-203ENST00000376561 PPRC1Q5VV67 1664 aaKnown RBP25.05■■□□□ 1.6
CTTN-203ENST00000376561 TSPOAP1O95153 1857 aa25.05■■□□□ 1.6
CTTN-203ENST00000376561 RNF17Q9BXT8 1623 aaKnown RBP25.03■■□□□ 1.6
CTTN-203ENST00000376561 UHRF1BP1Q6BDS2 1440 aa25.02■■□□□ 1.6
CTTN-203ENST00000376561 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
CTTN-203ENST00000376561 HSPA5P11021 654 aaKnown RBP25.01■■□□□ 1.59
CTTN-203ENST00000376561 BCORL1Q5H9F3 1711 aa25.01■■□□□ 1.59
CTTN-203ENST00000376561 DIP2CQ9Y2E4 1556 aa25■■□□□ 1.59
CTTN-203ENST00000376561 SPHKAPQ2M3C7 1700 aa24.99■■□□□ 1.59
CTTN-203ENST00000376561 KIF13AQ9H1H9 1805 aa24.99■■□□□ 1.59
CTTN-203ENST00000376561 TRPM2O94759 1503 aa24.98■■□□□ 1.59
CTTN-203ENST00000376561 PTPRTO14522 1441 aa24.97■■□□□ 1.59
CTTN-203ENST00000376561 ZNF326Q5BKZ1 582 aaKnown RBP24.97■■□□□ 1.59
CTTN-203ENST00000376561 DCAF11Q8TEB1 546 aa24.97■■□□□ 1.59
CTTN-203ENST00000376561 DDX10Q13206 875 aaKnown RBP24.96■■□□□ 1.59
CTTN-203ENST00000376561 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
CTTN-203ENST00000376561 ZMYM4Q5VZL5 1548 aa24.95■■□□□ 1.58
CTTN-203ENST00000376561 KDM2AQ9Y2K7 1162 aa24.94■■□□□ 1.58
CTTN-203ENST00000376561 EFCAB6Q5THR3 1501 aa24.94■■□□□ 1.58
CTTN-203ENST00000376561 CEP152O94986 1710 aa24.93■■□□□ 1.58
CTTN-203ENST00000376561 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
CTTN-203ENST00000376561 RGL3Q3MIN7 710 aa24.93■■□□□ 1.58
CTTN-203ENST00000376561 RALGAPBQ86X10 1494 aa24.93■■□□□ 1.58
CTTN-203ENST00000376561 SPATA31E1Q6ZUB1 1445 aa24.92■■□□□ 1.58
CTTN-203ENST00000376561 GGT6Q6P531 493 aa24.9■■□□□ 1.58
CTTN-203ENST00000376561 CLTCL1P53675 1640 aa24.89■■□□□ 1.58
CTTN-203ENST00000376561 PRAG1Q86YV5 1406 aa24.87■■□□□ 1.57
CTTN-203ENST00000376561 ABCC3O15438 1527 aa24.84■■□□□ 1.57
CTTN-203ENST00000376561 WASHC2AQ641Q2 1341 aa24.84■■□□□ 1.57
CTTN-203ENST00000376561 USP47Q96K76 1375 aa24.83■■□□□ 1.57
CTTN-203ENST00000376561 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.57
CTTN-203ENST00000376561 WASHC2CQ9Y4E1 1318 aa24.82■■□□□ 1.56
CTTN-203ENST00000376561 NPATQ14207 1427 aa24.81■■□□□ 1.56
CTTN-203ENST00000376561 CARD11Q9BXL7 1154 aa24.8■■□□□ 1.56
CTTN-203ENST00000376561 NEURL4Q96JN8 1562 aa24.79■■□□□ 1.56
CTTN-203ENST00000376561 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
CTTN-203ENST00000376561 POLR1AO95602 1720 aaPredicted RBP24.78■■□□□ 1.56
CTTN-203ENST00000376561 UGGT1Q9NYU2 1555 aa24.78■■□□□ 1.56
CTTN-203ENST00000376561 C11orf95C9JLR9 678 aaPredicted RBP24.78■■□□□ 1.56
CTTN-203ENST00000376561 ROCK2O75116 1388 aaKnown RBP24.78■■□□□ 1.56
CTTN-203ENST00000376561 COL17A1Q9UMD9 1497 aaPredicted RBP24.78■■□□□ 1.56
CTTN-203ENST00000376561 ZC3H13Q5T200 1668 aaKnown RBP24.77■■□□□ 1.56
CTTN-203ENST00000376561 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
CTTN-203ENST00000376561 CCDC7Q96M83 1385 aa24.76■■□□□ 1.55
CTTN-203ENST00000376561 KIF1BO60333 1816 aa24.75■■□□□ 1.55
CTTN-203ENST00000376561 CFAP65Q6ZU64 1925 aaKnown RBP24.74■■□□□ 1.55
CTTN-203ENST00000376561 STAC3Q96MF2 364 aa24.73■■□□□ 1.55
CTTN-203ENST00000376561 GPRASP1Q5JY77 1395 aa24.72■■□□□ 1.55
CTTN-203ENST00000376561 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
CTTN-203ENST00000376561 LAMC1P11047 1609 aa24.71■■□□□ 1.55
CTTN-203ENST00000376561 MADDQ8WXG6 1647 aa24.71■■□□□ 1.55
CTTN-203ENST00000376561 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.55
CTTN-203ENST00000376561 AGLP35573 1532 aa24.7■■□□□ 1.54
CTTN-203ENST00000376561 KIF7Q2M1P5 1343 aa24.7■■□□□ 1.54
CTTN-203ENST00000376561 ARHGAP31Q2M1Z3 1444 aa24.7■■□□□ 1.54
CTTN-203ENST00000376561 SIGLEC1Q9BZZ2 1709 aa24.7■■□□□ 1.54
CTTN-203ENST00000376561 ARHGEF40Q8TER5 1519 aa24.68■■□□□ 1.54
CTTN-203ENST00000376561 NOS1P29475 1434 aa24.68■■□□□ 1.54
CTTN-203ENST00000376561 MROH2AA6NES4 1674 aa24.68■■□□□ 1.54
CTTN-203ENST00000376561 ANP32CO43423 234 aa24.66■■□□□ 1.54
CTTN-203ENST00000376561 ADGRB3O60242 1522 aa24.65■■□□□ 1.54
CTTN-203ENST00000376561 ST20-MTHFSA0A0A6YYL1 179 aa24.65■■□□□ 1.54
CTTN-203ENST00000376561 YTHDC1Q96MU7 727 aaKnown RBP24.65■■□□□ 1.54
CTTN-203ENST00000376561 IFT172Q9UG01 1749 aa24.64■■□□□ 1.53
CTTN-203ENST00000376561 SYNMO15061 1565 aa24.62■■□□□ 1.53
CTTN-203ENST00000376561 ARID4BQ4LE39 1312 aaPredicted RBP24.62■■□□□ 1.53
CTTN-203ENST00000376561 MYOM2P54296 1465 aa24.62■■□□□ 1.53
CTTN-203ENST00000376561 PIK3C2BO00750 1634 aa24.62■■□□□ 1.53
CTTN-203ENST00000376561 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
CTTN-203ENST00000376561 CENPBP07199 599 aaPredicted RBP24.59■■□□□ 1.53
CTTN-203ENST00000376561 CHGAP10645 457 aaKnown RBP24.58■■□□□ 1.52
CTTN-203ENST00000376561 PREX1Q8TCU6 1659 aa24.57■■□□□ 1.52
CTTN-203ENST00000376561 KIAA1210Q9ULL0 1709 aa24.57■■□□□ 1.52
CTTN-203ENST00000376561 CCER2I3L3R5 266 aa24.54■■□□□ 1.52
CTTN-203ENST00000376561 PPLO60437 1756 aa24.54■■□□□ 1.52
CTTN-203ENST00000376561 NRXN1Q9ULB1 1477 aa24.54■■□□□ 1.52
CTTN-203ENST00000376561 ADGRF5Q8IZF2 1346 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms