RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
SDHD-201ENST00000375549 ERBINQ96RT1 1412 aa18.17■□□□□ 0.5
SDHD-201ENST00000375549 ABCA6Q8N139 1617 aa18.17■□□□□ 0.5
SDHD-201ENST00000375549 A2MP01023 1474 aa18.17■□□□□ 0.5
SDHD-201ENST00000375549 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
SDHD-201ENST00000375549 DIP2CQ9Y2E4 1556 aa18.16■□□□□ 0.5
SDHD-201ENST00000375549 ACIN1Q9UKV3 1341 aaKnown RBP18.16■□□□□ 0.5
SDHD-201ENST00000375549 KIF3BO15066 747 aa18.13■□□□□ 0.49
SDHD-201ENST00000375549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
SDHD-201ENST00000375549 ATP10AO60312 1499 aa18.12■□□□□ 0.49
SDHD-201ENST00000375549 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
SDHD-201ENST00000375549 NUP155O75694 1391 aa18.1■□□□□ 0.49
SDHD-201ENST00000375549 ARHGEF40Q8TER5 1519 aa18.09■□□□□ 0.49
SDHD-201ENST00000375549 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
SDHD-201ENST00000375549 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
SDHD-201ENST00000375549 EIF2AK4Q9P2K8 1649 aaKnown RBP18.07■□□□□ 0.48
SDHD-201ENST00000375549 UNC13BO14795 1591 aa18.06■□□□□ 0.48
SDHD-201ENST00000375549 GGT6Q6P531 493 aa18.06■□□□□ 0.48
SDHD-201ENST00000375549 PZPP20742 1482 aa18.04■□□□□ 0.48
SDHD-201ENST00000375549 KANK1Q14678 1352 aa18.04■□□□□ 0.48
SDHD-201ENST00000375549 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
SDHD-201ENST00000375549 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
SDHD-201ENST00000375549 ARID4BQ4LE39 1312 aaPredicted RBP18.01■□□□□ 0.47
SDHD-201ENST00000375549 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
SDHD-201ENST00000375549 FAM135AQ9P2D6 1515 aa18.01■□□□□ 0.47
SDHD-201ENST00000375549 PKD2Q13563 968 aa18■□□□□ 0.47
SDHD-201ENST00000375549 AGLP35573 1532 aa18■□□□□ 0.47
SDHD-201ENST00000375549 BCORL1Q5H9F3 1711 aa17.99■□□□□ 0.47
SDHD-201ENST00000375549 MLECQ14165 292 aa17.99■□□□□ 0.47
SDHD-201ENST00000375549 RNF17Q9BXT8 1623 aaKnown RBP17.99■□□□□ 0.47
SDHD-201ENST00000375549 PRDM15P57071 1507 aaPredicted RBP17.99■□□□□ 0.47
SDHD-201ENST00000375549 MROH1Q8NDA8 1641 aa17.99■□□□□ 0.47
SDHD-201ENST00000375549 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
SDHD-201ENST00000375549 CLSPNQ9HAW4 1339 aa17.97■□□□□ 0.47
SDHD-201ENST00000375549 WASHC2CQ9Y4E1 1318 aa17.97■□□□□ 0.47
SDHD-201ENST00000375549 SIGLEC1Q9BZZ2 1709 aa17.97■□□□□ 0.47
SDHD-201ENST00000375549 VWDEQ8N2E2 1590 aa17.96■□□□□ 0.46
SDHD-201ENST00000375549 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
SDHD-201ENST00000375549 ABCC3O15438 1527 aa17.91■□□□□ 0.46
SDHD-201ENST00000375549 LMTK2Q8IWU2 1503 aa17.91■□□□□ 0.46
SDHD-201ENST00000375549 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
SDHD-201ENST00000375549 ANKRD30BQ9BXX2 1392 aa17.9■□□□□ 0.46
SDHD-201ENST00000375549 ESF1Q9H501 851 aaKnown RBP17.89■□□□□ 0.46
SDHD-201ENST00000375549 TET3O43151 1660 aa17.88■□□□□ 0.45
SDHD-201ENST00000375549 CEP152O94986 1710 aa17.88■□□□□ 0.45
SDHD-201ENST00000375549 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
SDHD-201ENST00000375549 EFCAB6Q5THR3 1501 aa17.86■□□□□ 0.45
SDHD-201ENST00000375549 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
SDHD-201ENST00000375549 E9PCH4 1651 aa17.85■□□□□ 0.45
SDHD-201ENST00000375549 ZC3H13Q5T200 1668 aaKnown RBP17.85■□□□□ 0.45
SDHD-201ENST00000375549 NPATQ14207 1427 aa17.84■□□□□ 0.45
SDHD-201ENST00000375549 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.45
SDHD-201ENST00000375549 CLTCQ00610 1675 aaKnown RBP17.82■□□□□ 0.44
SDHD-201ENST00000375549 ARHGAP31Q2M1Z3 1444 aa17.81■□□□□ 0.44
SDHD-201ENST00000375549 PLA2R1Q13018 1463 aa17.81■□□□□ 0.44
SDHD-201ENST00000375549 RPRD2Q5VT52 1461 aaKnown RBP17.81■□□□□ 0.44
SDHD-201ENST00000375549 CCDC144AA2RUR9 1427 aa17.8■□□□□ 0.44
SDHD-201ENST00000375549 PTPRTO14522 1441 aa17.8■□□□□ 0.44
SDHD-201ENST00000375549 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
SDHD-201ENST00000375549 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
SDHD-201ENST00000375549 FBXO31Q5XUX0 539 aaPredicted RBP17.77■□□□□ 0.44
SDHD-201ENST00000375549 RNF39Q9H2S5 420 aa17.77■□□□□ 0.44
SDHD-201ENST00000375549 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
SDHD-201ENST00000375549 TRPM2O94759 1503 aa17.76■□□□□ 0.43
SDHD-201ENST00000375549 SPHKAPQ2M3C7 1700 aa17.75■□□□□ 0.43
SDHD-201ENST00000375549 NOS1P29475 1434 aa17.74■□□□□ 0.43
SDHD-201ENST00000375549 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
SDHD-201ENST00000375549 ERVK-7P63135 1459 aa17.73■□□□□ 0.43
SDHD-201ENST00000375549 FER1L4A9Z1Z3 1794 aa17.73■□□□□ 0.43
SDHD-201ENST00000375549 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
SDHD-201ENST00000375549 CEBPAP49715 358 aaPredicted RBP17.72■□□□□ 0.43
SDHD-201ENST00000375549 UGGT1Q9NYU2 1555 aa17.72■□□□□ 0.43
SDHD-201ENST00000375549 MADDQ8WXG6 1647 aa17.71■□□□□ 0.43
SDHD-201ENST00000375549 CLTCL1P53675 1640 aa17.71■□□□□ 0.42
SDHD-201ENST00000375549 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
SDHD-201ENST00000375549 PREX1Q8TCU6 1659 aa17.7■□□□□ 0.42
SDHD-201ENST00000375549 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
SDHD-201ENST00000375549 ADAMTSL3P82987 1691 aa17.69■□□□□ 0.42
SDHD-201ENST00000375549 CHGAP10645 457 aaKnown RBP17.69■□□□□ 0.42
SDHD-201ENST00000375549 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
SDHD-201ENST00000375549 SYNMO15061 1565 aa17.69■□□□□ 0.42
SDHD-201ENST00000375549 SLC52A1Q9NWF4 448 aa17.68■□□□□ 0.42
SDHD-201ENST00000375549 CFAP65Q6ZU64 1925 aaKnown RBP17.68■□□□□ 0.42
SDHD-201ENST00000375549 RIMS1Q86UR5 1692 aaKnown RBP17.67■□□□□ 0.42
SDHD-201ENST00000375549 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
SDHD-201ENST00000375549 IDI1Q13907 227 aa17.67■□□□□ 0.42
SDHD-201ENST00000375549 TNRQ92752 1358 aa17.66■□□□□ 0.42
SDHD-201ENST00000375549 C3P01024 1663 aa17.65■□□□□ 0.42
SDHD-201ENST00000375549 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.42
SDHD-201ENST00000375549 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.42
SDHD-201ENST00000375549 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
SDHD-201ENST00000375549 PIK3C2BO00750 1634 aa17.63■□□□□ 0.41
SDHD-201ENST00000375549 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
SDHD-201ENST00000375549 KDM2AQ9Y2K7 1162 aa17.63■□□□□ 0.41
SDHD-201ENST00000375549 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
SDHD-201ENST00000375549 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
SDHD-201ENST00000375549 ADGRB3O60242 1522 aa17.59■□□□□ 0.41
SDHD-201ENST00000375549 PTPRMP28827 1452 aa17.59■□□□□ 0.41
SDHD-201ENST00000375549 KIF1BO60333 1816 aa17.58■□□□□ 0.41
SDHD-201ENST00000375549 NEURL4Q96JN8 1562 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms