RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
UBR4-203ENST00000375225 UNC13BO14795 1591 aa17.04■□□□□ 0.32
UBR4-203ENST00000375225 HECW2Q9P2P5 1572 aa17.04■□□□□ 0.32
UBR4-203ENST00000375225 HSPA5P11021 654 aaKnown RBP17.03■□□□□ 0.32
UBR4-203ENST00000375225 L3MBTL2Q969R5 705 aa17.03■□□□□ 0.32
UBR4-203ENST00000375225 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
UBR4-203ENST00000375225 PPRC1Q5VV67 1664 aaKnown RBP17.03■□□□□ 0.32
UBR4-203ENST00000375225 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
UBR4-203ENST00000375225 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.32
UBR4-203ENST00000375225 PZPP20742 1482 aa17.01■□□□□ 0.31
UBR4-203ENST00000375225 RICTORQ6R327 1708 aa17.01■□□□□ 0.31
UBR4-203ENST00000375225 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
UBR4-203ENST00000375225 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
UBR4-203ENST00000375225 NUP155O75694 1391 aa16.99■□□□□ 0.31
UBR4-203ENST00000375225 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
UBR4-203ENST00000375225 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
UBR4-203ENST00000375225 MAGI2Q86UL8 1455 aa16.97■□□□□ 0.31
UBR4-203ENST00000375225 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
UBR4-203ENST00000375225 SUPT16HQ9Y5B9 1047 aaKnown RBP16.96■□□□□ 0.31
UBR4-203ENST00000375225 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.31
UBR4-203ENST00000375225 NEFLP07196 543 aa16.96■□□□□ 0.3
UBR4-203ENST00000375225 FOXD1Q16676 465 aa16.95■□□□□ 0.3
UBR4-203ENST00000375225 DEPDC5O75140 1603 aa16.94■□□□□ 0.3
UBR4-203ENST00000375225 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
UBR4-203ENST00000375225 WASHC2AQ641Q2 1341 aa16.94■□□□□ 0.3
UBR4-203ENST00000375225 ABCA6Q8N139 1617 aa16.93■□□□□ 0.3
UBR4-203ENST00000375225 ZMYM4Q5VZL5 1548 aa16.93■□□□□ 0.3
UBR4-203ENST00000375225 FRMPD1Q5SYB0 1578 aa16.93■□□□□ 0.3
UBR4-203ENST00000375225 A2MP01023 1474 aa16.93■□□□□ 0.3
UBR4-203ENST00000375225 CCDC7Q96M83 1385 aa16.92■□□□□ 0.3
UBR4-203ENST00000375225 PKD2Q13563 968 aa16.91■□□□□ 0.3
UBR4-203ENST00000375225 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
UBR4-203ENST00000375225 RAPGEF3O95398 923 aa16.91■□□□□ 0.3
UBR4-203ENST00000375225 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
UBR4-203ENST00000375225 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
UBR4-203ENST00000375225 DIP2CQ9Y2E4 1556 aa16.9■□□□□ 0.3
UBR4-203ENST00000375225 KANK1Q14678 1352 aa16.89■□□□□ 0.29
UBR4-203ENST00000375225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.297e-7■■■□□ 17.3
UBR4-203ENST00000375225 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
UBR4-203ENST00000375225 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
UBR4-203ENST00000375225 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
UBR4-203ENST00000375225 SPATA31E1Q6ZUB1 1445 aa16.87■□□□□ 0.29
UBR4-203ENST00000375225 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
UBR4-203ENST00000375225 TET3O43151 1660 aa16.86■□□□□ 0.29
UBR4-203ENST00000375225 KIF3BO15066 747 aa16.86■□□□□ 0.29
UBR4-203ENST00000375225 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
UBR4-203ENST00000375225 MROH1Q8NDA8 1641 aa16.84■□□□□ 0.29
UBR4-203ENST00000375225 RALGAPBQ86X10 1494 aa16.83■□□□□ 0.29
UBR4-203ENST00000375225 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
UBR4-203ENST00000375225 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
UBR4-203ENST00000375225 YEATS2Q9ULM3 1422 aa16.81■□□□□ 0.28
UBR4-203ENST00000375225 USP47Q96K76 1375 aa16.81■□□□□ 0.28
UBR4-203ENST00000375225 E9PCH4 1651 aa16.81■□□□□ 0.28
UBR4-203ENST00000375225 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
UBR4-203ENST00000375225 ATP10AO60312 1499 aa16.8■□□□□ 0.28
UBR4-203ENST00000375225 KIF7Q2M1P5 1343 aa16.79■□□□□ 0.28
UBR4-203ENST00000375225 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
UBR4-203ENST00000375225 ARHGEF40Q8TER5 1519 aa16.79■□□□□ 0.28
UBR4-203ENST00000375225 CEP152O94986 1710 aa16.79■□□□□ 0.28
UBR4-203ENST00000375225 HNRNPUQ00839 825 aaKnown RBP eCLIP16.78■□□□□ 0.28
UBR4-203ENST00000375225 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
UBR4-203ENST00000375225 SPHKAPQ2M3C7 1700 aa16.78■□□□□ 0.28
UBR4-203ENST00000375225 ZC3H13Q5T200 1668 aaKnown RBP16.78■□□□□ 0.28
UBR4-203ENST00000375225 CCDC144AA2RUR9 1427 aa16.77■□□□□ 0.28
UBR4-203ENST00000375225 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
UBR4-203ENST00000375225 FKBP8Q14318 412 aa16.77■□□□□ 0.28
UBR4-203ENST00000375225 EFCAB6Q5THR3 1501 aa16.77■□□□□ 0.28
UBR4-203ENST00000375225 COL17A1Q9UMD9 1497 aaPredicted RBP16.75■□□□□ 0.27
UBR4-203ENST00000375225 TRPM2O94759 1503 aa16.74■□□□□ 0.27
UBR4-203ENST00000375225 MYT1Q01538 1121 aa16.74■□□□□ 0.27
UBR4-203ENST00000375225 ZNF326Q5BKZ1 582 aaKnown RBP16.74■□□□□ 0.27
UBR4-203ENST00000375225 AGLP35573 1532 aa16.73■□□□□ 0.27
UBR4-203ENST00000375225 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
UBR4-203ENST00000375225 GGT6Q6P531 493 aa16.73■□□□□ 0.27
UBR4-203ENST00000375225 CARD11Q9BXL7 1154 aa16.73■□□□□ 0.27
UBR4-203ENST00000375225 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
UBR4-203ENST00000375225 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
UBR4-203ENST00000375225 CAMSAP1Q5T5Y3 1602 aa16.72■□□□□ 0.27
UBR4-203ENST00000375225 ABCC3O15438 1527 aa16.72■□□□□ 0.27
UBR4-203ENST00000375225 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
UBR4-203ENST00000375225 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
UBR4-203ENST00000375225 PTPRTO14522 1441 aa16.7■□□□□ 0.26
UBR4-203ENST00000375225 WASHC2CQ9Y4E1 1318 aa16.69■□□□□ 0.26
UBR4-203ENST00000375225 LAMC1P11047 1609 aa16.68■□□□□ 0.26
UBR4-203ENST00000375225 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
UBR4-203ENST00000375225 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
UBR4-203ENST00000375225 CLTCL1P53675 1640 aa16.66■□□□□ 0.26
UBR4-203ENST00000375225 TRPM1Q7Z4N2 1603 aa16.65■□□□□ 0.26
UBR4-203ENST00000375225 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
UBR4-203ENST00000375225 KIF1BO60333 1816 aa16.64■□□□□ 0.25
UBR4-203ENST00000375225 KDM2AQ9Y2K7 1162 aa16.64■□□□□ 0.25
UBR4-203ENST00000375225 NPATQ14207 1427 aa16.64■□□□□ 0.25
UBR4-203ENST00000375225 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
UBR4-203ENST00000375225 SIGLEC1Q9BZZ2 1709 aa16.64■□□□□ 0.25
UBR4-203ENST00000375225 ARHGAP31Q2M1Z3 1444 aa16.63■□□□□ 0.25
UBR4-203ENST00000375225 FAM9BQ8IZU0 186 aa16.63■□□□□ 0.25
UBR4-203ENST00000375225 NEURL4Q96JN8 1562 aa16.63■□□□□ 0.25
UBR4-203ENST00000375225 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
UBR4-203ENST00000375225 POLR3GLQ9BT43 218 aa16.62■□□□□ 0.25
UBR4-203ENST00000375225 CFAP65Q6ZU64 1925 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms