RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 RGS17Q9UGC6 210 aaPredicted RBP18.19■□□□□ 0.5
ABCA1-201ENST00000374733 PTPRKQ15262 1439 aa18.18■□□□□ 0.5
ABCA1-201ENST00000374733 KIDINS220Q9ULH0 1771 aa18.18■□□□□ 0.5
ABCA1-201ENST00000374733 SHANK2Q9UPX8 1470 aa18.18■□□□□ 0.5
ABCA1-201ENST00000374733 SETD1AO15047 1707 aaKnown RBP18.17■□□□□ 0.5
ABCA1-201ENST00000374733 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
ABCA1-201ENST00000374733 CDC42BPBQ9Y5S2 1711 aa18.15■□□□□ 0.5
ABCA1-201ENST00000374733 NEURL4Q96JN8 1562 aa18.14■□□□□ 0.49
ABCA1-201ENST00000374733 ABCC1P33527 1531 aa18.13■□□□□ 0.49
ABCA1-201ENST00000374733 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
ABCA1-201ENST00000374733 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
ABCA1-201ENST00000374733 A2ML1A8K2U0 1454 aa18.08■□□□□ 0.49
ABCA1-201ENST00000374733 ATP1B4Q9UN42 357 aaPredicted RBP18.08■□□□□ 0.48
ABCA1-201ENST00000374733 PREX2Q70Z35 1606 aa18.08■□□□□ 0.48
ABCA1-201ENST00000374733 RNF17Q9BXT8 1623 aaKnown RBP18.08■□□□□ 0.48
ABCA1-201ENST00000374733 POTEAQ6S8J7 498 aa18.07■□□□□ 0.48
ABCA1-201ENST00000374733 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
ABCA1-201ENST00000374733 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
ABCA1-201ENST00000374733 STRCP1A6NGW2 1772 aa18.03■□□□□ 0.48
ABCA1-201ENST00000374733 CLIP1P30622 1438 aa18.03■□□□□ 0.48
ABCA1-201ENST00000374733 SAMD9LQ8IVG5 1584 aa18.02■□□□□ 0.48
ABCA1-201ENST00000374733 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.48
ABCA1-201ENST00000374733 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
ABCA1-201ENST00000374733 SPDYE6P0CI01 402 aa18■□□□□ 0.47
ABCA1-201ENST00000374733 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
ABCA1-201ENST00000374733 SYNMO15061 1565 aa18■□□□□ 0.47
ABCA1-201ENST00000374733 PLXNC1O60486 1568 aa18■□□□□ 0.47
ABCA1-201ENST00000374733 SRCAPQ6ZRS2 3230 aa17.99■□□□□ 0.47
ABCA1-201ENST00000374733 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
ABCA1-201ENST00000374733 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
ABCA1-201ENST00000374733 GGT6Q6P531 493 aa17.97■□□□□ 0.47
ABCA1-201ENST00000374733 IQGAP1P46940 1657 aa17.96■□□□□ 0.47
ABCA1-201ENST00000374733 CDC42BPAQ5VT25 1732 aa17.96■□□□□ 0.47
ABCA1-201ENST00000374733 NPHP4O75161 1426 aaPredicted RBP17.96■□□□□ 0.47
ABCA1-201ENST00000374733 ATP7AQ04656 1500 aa17.95■□□□□ 0.46
ABCA1-201ENST00000374733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.94■□□□□ 0.46
ABCA1-201ENST00000374733 SYCP2Q9BX26 1530 aa17.94■□□□□ 0.46
ABCA1-201ENST00000374733 A2MP01023 1474 aa17.94■□□□□ 0.46
ABCA1-201ENST00000374733 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
ABCA1-201ENST00000374733 SPDYE4A6NLX3 237 aa17.93■□□□□ 0.46
ABCA1-201ENST00000374733 ANKLE2Q86XL3 938 aa17.93■□□□□ 0.46
ABCA1-201ENST00000374733 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
ABCA1-201ENST00000374733 INO80Q9ULG1 1556 aaPredicted RBP17.92■□□□□ 0.46
ABCA1-201ENST00000374733 TNRQ92752 1358 aa17.91■□□□□ 0.46
ABCA1-201ENST00000374733 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
ABCA1-201ENST00000374733 MED14O60244 1454 aa17.91■□□□□ 0.46
ABCA1-201ENST00000374733 FKBP8Q14318 412 aa17.9■□□□□ 0.46
ABCA1-201ENST00000374733 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
ABCA1-201ENST00000374733 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
ABCA1-201ENST00000374733 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
ABCA1-201ENST00000374733 FBXO31Q5XUX0 539 aaPredicted RBP17.87■□□□□ 0.45
ABCA1-201ENST00000374733 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
ABCA1-201ENST00000374733 UGGT1Q9NYU2 1555 aa17.87■□□□□ 0.45
ABCA1-201ENST00000374733 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
ABCA1-201ENST00000374733 FAM135AQ9P2D6 1515 aa17.85■□□□□ 0.45
ABCA1-201ENST00000374733 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.446e-7■■■■□ 22.9
ABCA1-201ENST00000374733 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
ABCA1-201ENST00000374733 PZPP20742 1482 aa17.82■□□□□ 0.44
ABCA1-201ENST00000374733 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
ABCA1-201ENST00000374733 ROBO1Q9Y6N7 1651 aa17.81■□□□□ 0.44
ABCA1-201ENST00000374733 SSUH2Q9Y2M2 353 aa17.81■□□□□ 0.44
ABCA1-201ENST00000374733 NLRP1Q9C000 1473 aa17.8■□□□□ 0.44
ABCA1-201ENST00000374733 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
ABCA1-201ENST00000374733 FAM135BQ49AJ0 1406 aa17.79■□□□□ 0.44
ABCA1-201ENST00000374733 KDM5DQ9BY66 1539 aa17.78■□□□□ 0.44
ABCA1-201ENST00000374733 AKT1S1Q96B36 256 aa17.78■□□□□ 0.44
ABCA1-201ENST00000374733 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
ABCA1-201ENST00000374733 MIA2Q96PC5 1412 aa17.75■□□□□ 0.43
ABCA1-201ENST00000374733 EEA1Q15075 1411 aa17.74■□□□□ 0.43
ABCA1-201ENST00000374733 PHLPP1O60346 1717 aa17.73■□□□□ 0.43
ABCA1-201ENST00000374733 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
ABCA1-201ENST00000374733 KIAA1107Q9UPP5 1409 aa17.72■□□□□ 0.43
ABCA1-201ENST00000374733 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
ABCA1-201ENST00000374733 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
ABCA1-201ENST00000374733 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
ABCA1-201ENST00000374733 KIF3BO15066 747 aa17.67■□□□□ 0.42
ABCA1-201ENST00000374733 SCAF11Q99590 1463 aaKnown RBP17.67■□□□□ 0.42
ABCA1-201ENST00000374733 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
ABCA1-201ENST00000374733 JCADQ9P266 1359 aa17.66■□□□□ 0.42
ABCA1-201ENST00000374733 LRP6O75581 1613 aa17.66■□□□□ 0.42
ABCA1-201ENST00000374733 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
ABCA1-201ENST00000374733 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
ABCA1-201ENST00000374733 CFDP1Q9UEE9 299 aaPredicted RBP17.65■□□□□ 0.42
ABCA1-201ENST00000374733 TMEM94Q12767 1356 aa17.65■□□□□ 0.42
ABCA1-201ENST00000374733 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
ABCA1-201ENST00000374733 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
ABCA1-201ENST00000374733 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
ABCA1-201ENST00000374733 UBTFP17480 764 aaKnown RBP17.63■□□□□ 0.41
ABCA1-201ENST00000374733 PROM2Q8N271 834 aa17.62■□□□□ 0.41
ABCA1-201ENST00000374733 CASKIN1Q8WXD9 1431 aa17.62■□□□□ 0.41
ABCA1-201ENST00000374733 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
ABCA1-201ENST00000374733 CFAP65Q6ZU64 1925 aaKnown RBP17.6■□□□□ 0.41
ABCA1-201ENST00000374733 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
ABCA1-201ENST00000374733 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
ABCA1-201ENST00000374733 RXRBP28702 533 aa17.59■□□□□ 0.41
ABCA1-201ENST00000374733 RBM33Q96EV2 1170 aaKnown RBP17.59■□□□□ 0.41
ABCA1-201ENST00000374733 ERVK-7P63135 1459 aa17.58■□□□□ 0.41
ABCA1-201ENST00000374733 LTKP29376 864 aa17.58■□□□□ 0.4
ABCA1-201ENST00000374733 CDK12Q9NYV4 1490 aaPredicted RBP17.57■□□□□ 0.4
ABCA1-201ENST00000374733 NCOA2Q15596 1464 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms