RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
HSPG2-202ENST00000374676 GCC2Q8IWJ2 1684 aa17.1■□□□□ 0.33
HSPG2-202ENST00000374676 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
HSPG2-202ENST00000374676 DEPDC5O75140 1603 aa17.09■□□□□ 0.33
HSPG2-202ENST00000374676 CNTLNQ9NXG0 1405 aa17.08■□□□□ 0.32
HSPG2-202ENST00000374676 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
HSPG2-202ENST00000374676 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
HSPG2-202ENST00000374676 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-202ENST00000374676 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
HSPG2-202ENST00000374676 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-202ENST00000374676 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
HSPG2-202ENST00000374676 WASHC2CQ9Y4E1 1318 aa17.05■□□□□ 0.32
HSPG2-202ENST00000374676 KANK1Q14678 1352 aa17.04■□□□□ 0.32
HSPG2-202ENST00000374676 PTPRMP28827 1452 aa17.04■□□□□ 0.32
HSPG2-202ENST00000374676 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
HSPG2-202ENST00000374676 CLTCQ00610 1675 aaKnown RBP17.04■□□□□ 0.32
HSPG2-202ENST00000374676 UNC13BO14795 1591 aa17.03■□□□□ 0.32
HSPG2-202ENST00000374676 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
HSPG2-202ENST00000374676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
HSPG2-202ENST00000374676 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
HSPG2-202ENST00000374676 ACIN1Q9UKV3 1341 aaKnown RBP17.02■□□□□ 0.32
HSPG2-202ENST00000374676 ZC3H13Q5T200 1668 aaKnown RBP17.02■□□□□ 0.32
HSPG2-202ENST00000374676 ZMYM3Q14202 1370 aa17.02■□□□□ 0.31
HSPG2-202ENST00000374676 ABCC3O15438 1527 aa17.01■□□□□ 0.31
HSPG2-202ENST00000374676 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
HSPG2-202ENST00000374676 LMTK2Q8IWU2 1503 aa17■□□□□ 0.31
HSPG2-202ENST00000374676 CEP152O94986 1710 aa16.99■□□□□ 0.31
HSPG2-202ENST00000374676 HRCP23327 699 aa16.99■□□□□ 0.31
HSPG2-202ENST00000374676 NUP155O75694 1391 aa16.99■□□□□ 0.31
HSPG2-202ENST00000374676 C3P01024 1663 aa16.98■□□□□ 0.31
HSPG2-202ENST00000374676 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
HSPG2-202ENST00000374676 ARHGAP31Q2M1Z3 1444 aa16.96■□□□□ 0.31
HSPG2-202ENST00000374676 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
HSPG2-202ENST00000374676 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.3
HSPG2-202ENST00000374676 RAB3GAP2Q9H2M9 1393 aa16.95■□□□□ 0.3
HSPG2-202ENST00000374676 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
HSPG2-202ENST00000374676 PZPP20742 1482 aa16.94■□□□□ 0.3
HSPG2-202ENST00000374676 TET3O43151 1660 aa16.94■□□□□ 0.3
HSPG2-202ENST00000374676 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
HSPG2-202ENST00000374676 NPATQ14207 1427 aa16.93■□□□□ 0.3
HSPG2-202ENST00000374676 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
HSPG2-202ENST00000374676 AEBP2Q6ZN18 517 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-202ENST00000374676 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
HSPG2-202ENST00000374676 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-202ENST00000374676 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
HSPG2-202ENST00000374676 E9PCH4 1651 aa16.88■□□□□ 0.29
HSPG2-202ENST00000374676 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
HSPG2-202ENST00000374676 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
HSPG2-202ENST00000374676 PREX1Q8TCU6 1659 aa16.87■□□□□ 0.29
HSPG2-202ENST00000374676 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
HSPG2-202ENST00000374676 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
HSPG2-202ENST00000374676 TNRQ92752 1358 aa16.86■□□□□ 0.29
HSPG2-202ENST00000374676 NOS1P29475 1434 aa16.85■□□□□ 0.29
HSPG2-202ENST00000374676 PKD2Q13563 968 aa16.84■□□□□ 0.29
HSPG2-202ENST00000374676 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
HSPG2-202ENST00000374676 PTPRTO14522 1441 aa16.81■□□□□ 0.28
HSPG2-202ENST00000374676 UHRF1BP1Q6BDS2 1440 aa16.81■□□□□ 0.28
HSPG2-202ENST00000374676 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
HSPG2-202ENST00000374676 SLC52A1Q9NWF4 448 aa16.8■□□□□ 0.28
HSPG2-202ENST00000374676 MYO3AQ8NEV4 1616 aa16.79■□□□□ 0.28
HSPG2-202ENST00000374676 SYNMO15061 1565 aa16.79■□□□□ 0.28
HSPG2-202ENST00000374676 SPHKAPQ2M3C7 1700 aa16.78■□□□□ 0.28
HSPG2-202ENST00000374676 A2ML1A8K2U0 1454 aa16.78■□□□□ 0.28
HSPG2-202ENST00000374676 IDI1Q13907 227 aa16.77■□□□□ 0.28
HSPG2-202ENST00000374676 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
HSPG2-202ENST00000374676 ZNF142P52746 1687 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-202ENST00000374676 CEP170BQ9Y4F5 1589 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-202ENST00000374676 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
HSPG2-202ENST00000374676 FOXD1Q16676 465 aa16.75■□□□□ 0.27
HSPG2-202ENST00000374676 PIK3C2BO00750 1634 aa16.74■□□□□ 0.27
HSPG2-202ENST00000374676 TRPM2O94759 1503 aa16.74■□□□□ 0.27
HSPG2-202ENST00000374676 KDM5AP29375 1690 aaKnown RBP16.73■□□□□ 0.27
HSPG2-202ENST00000374676 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
HSPG2-202ENST00000374676 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
HSPG2-202ENST00000374676 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
HSPG2-202ENST00000374676 ANKRD30BQ9BXX2 1392 aa16.7■□□□□ 0.26
HSPG2-202ENST00000374676 HSPA2P54652 639 aa16.69■□□□□ 0.26
HSPG2-202ENST00000374676 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
HSPG2-202ENST00000374676 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
HSPG2-202ENST00000374676 KIF1BO60333 1816 aa16.68■□□□□ 0.26
HSPG2-202ENST00000374676 TMEM131LA2VDJ0 1609 aa16.67■□□□□ 0.26
HSPG2-202ENST00000374676 DHX57Q6P158 1386 aaKnown RBP16.67■□□□□ 0.26
HSPG2-202ENST00000374676 ADGRB3O60242 1522 aa16.67■□□□□ 0.26
HSPG2-202ENST00000374676 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
HSPG2-202ENST00000374676 CCDC144AA2RUR9 1427 aa16.66■□□□□ 0.26
HSPG2-202ENST00000374676 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
HSPG2-202ENST00000374676 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.25
HSPG2-202ENST00000374676 SLIT1O75093 1534 aa16.64■□□□□ 0.25
HSPG2-202ENST00000374676 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
HSPG2-202ENST00000374676 STRCQ7RTU9 1775 aa16.62■□□□□ 0.25
HSPG2-202ENST00000374676 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
HSPG2-202ENST00000374676 NEURL4Q96JN8 1562 aa16.61■□□□□ 0.25
HSPG2-202ENST00000374676 HDGFP51858 240 aaKnown RBP16.61■□□□□ 0.25
HSPG2-202ENST00000374676 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
HSPG2-202ENST00000374676 SPATA31E1Q6ZUB1 1445 aa16.6■□□□□ 0.25
HSPG2-202ENST00000374676 LTKP29376 864 aa16.59■□□□□ 0.25
HSPG2-202ENST00000374676 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
HSPG2-202ENST00000374676 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
HSPG2-202ENST00000374676 NCKAP5LQ9HCH0 1330 aa16.59■□□□□ 0.25
HSPG2-202ENST00000374676 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms