RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 UNC13BO14795 1591 aa23.37■■□□□ 1.33
PHF1-202ENST00000374516 ERBINQ96RT1 1412 aa23.37■■□□□ 1.33
PHF1-202ENST00000374516 DCAF11Q8TEB1 546 aa23.36■■□□□ 1.33
PHF1-202ENST00000374516 SCAPERQ9BY12 1400 aa23.35■■□□□ 1.33
PHF1-202ENST00000374516 ADGRL1O94910 1474 aa23.34■■□□□ 1.33
PHF1-202ENST00000374516 RGL3Q3MIN7 710 aa23.33■■□□□ 1.33
PHF1-202ENST00000374516 BCL11AQ9H165 835 aa23.32■■□□□ 1.32
PHF1-202ENST00000374516 CCDC144AA2RUR9 1427 aa23.32■■□□□ 1.32
PHF1-202ENST00000374516 SPATA31E1Q6ZUB1 1445 aa23.32■■□□□ 1.32
PHF1-202ENST00000374516 PLA2R1Q13018 1463 aa23.32■■□□□ 1.32
PHF1-202ENST00000374516 RTEL1-TNFRSF6BF6WH68 1400 aa23.32■■□□□ 1.32
PHF1-202ENST00000374516 ZFYVE16Q7Z3T8 1539 aa23.31■■□□□ 1.32
PHF1-202ENST00000374516 IQGAP3Q86VI3 1631 aa23.3■■□□□ 1.32
PHF1-202ENST00000374516 CCDC7Q96M83 1385 aa23.28■■□□□ 1.32
PHF1-202ENST00000374516 MAGI2Q86UL8 1455 aa23.27■■□□□ 1.32
PHF1-202ENST00000374516 USP47Q96K76 1375 aa23.26■■□□□ 1.31
PHF1-202ENST00000374516 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
PHF1-202ENST00000374516 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
PHF1-202ENST00000374516 ATP7AQ04656 1500 aa23.25■■□□□ 1.31
PHF1-202ENST00000374516 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
PHF1-202ENST00000374516 CARD11Q9BXL7 1154 aa23.25■■□□□ 1.31
PHF1-202ENST00000374516 KIF7Q2M1P5 1343 aa23.24■■□□□ 1.31
PHF1-202ENST00000374516 KIF3BO15066 747 aa23.24■■□□□ 1.31
PHF1-202ENST00000374516 MSH5O43196 834 aa23.22■■□□□ 1.31
PHF1-202ENST00000374516 INO80Q9ULG1 1556 aaPredicted RBP23.21■■□□□ 1.31
PHF1-202ENST00000374516 HNRNPUQ00839 825 aaKnown RBP eCLIP23.2■■□□□ 1.3
PHF1-202ENST00000374516 POLR3GLQ9BT43 218 aa23.2■■□□□ 1.3
PHF1-202ENST00000374516 RALGAPBQ86X10 1494 aa23.19■■□□□ 1.3
PHF1-202ENST00000374516 CNTLNQ9NXG0 1405 aa23.18■■□□□ 1.3
PHF1-202ENST00000374516 DHX29Q7Z478 1369 aaKnown RBP23.17■■□□□ 1.3
PHF1-202ENST00000374516 KDM5CP41229 1560 aa23.15■■□□□ 1.3
PHF1-202ENST00000374516 FANCIQ9NVI1 1328 aa23.15■■□□□ 1.3
PHF1-202ENST00000374516 ROCK2O75116 1388 aaKnown RBP23.15■■□□□ 1.3
PHF1-202ENST00000374516 ATP10AO60312 1499 aa23.15■■□□□ 1.3
PHF1-202ENST00000374516 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
PHF1-202ENST00000374516 A2MP01023 1474 aa23.14■■□□□ 1.3
PHF1-202ENST00000374516 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
PHF1-202ENST00000374516 NBPF1Q3BBV0 1214 aa23.13■■□□□ 1.29
PHF1-202ENST00000374516 PRAG1Q86YV5 1406 aa23.13■■□□□ 1.29
PHF1-202ENST00000374516 KANK1Q14678 1352 aa23.12■■□□□ 1.29
PHF1-202ENST00000374516 BCORL1Q5H9F3 1711 aa23.12■■□□□ 1.29
PHF1-202ENST00000374516 E9PCH4 1651 aa23.12■■□□□ 1.29
PHF1-202ENST00000374516 IRX6P78412 446 aaPredicted RBP23.11■■□□□ 1.29
PHF1-202ENST00000374516 KIDINS220Q9ULH0 1771 aa23.11■■□□□ 1.29
PHF1-202ENST00000374516 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
PHF1-202ENST00000374516 DEPDC5O75140 1603 aa23.1■■□□□ 1.29
PHF1-202ENST00000374516 POGZQ7Z3K3 1410 aa23.09■■□□□ 1.29
PHF1-202ENST00000374516 ERICH6BQ5W0A0 696 aa23.08■■□□□ 1.29
PHF1-202ENST00000374516 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
PHF1-202ENST00000374516 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
PHF1-202ENST00000374516 POLR1AO95602 1720 aaPredicted RBP23.05■■□□□ 1.28
PHF1-202ENST00000374516 CCDC184Q52MB2 194 aa23.04■■□□□ 1.28
PHF1-202ENST00000374516 CFAP74Q9C0B2 1584 aa23.04■■□□□ 1.28
PHF1-202ENST00000374516 GGT6Q6P531 493 aa23.03■■□□□ 1.28
PHF1-202ENST00000374516 PTPRTO14522 1441 aa23.03■■□□□ 1.28
PHF1-202ENST00000374516 VWDEQ8N2E2 1590 aa23.03■■□□□ 1.28
PHF1-202ENST00000374516 TRPM1Q7Z4N2 1603 aa23.03■■□□□ 1.28
PHF1-202ENST00000374516 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.28
PHF1-202ENST00000374516 TET3O43151 1660 aa23.02■■□□□ 1.28
PHF1-202ENST00000374516 TRPM2O94759 1503 aa23.02■■□□□ 1.28
PHF1-202ENST00000374516 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.27
PHF1-202ENST00000374516 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.27
PHF1-202ENST00000374516 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.27
PHF1-202ENST00000374516 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.27
PHF1-202ENST00000374516 PRDM15P57071 1507 aaPredicted RBP23.01■■□□□ 1.27
PHF1-202ENST00000374516 PPP4R2Q9NY27 417 aa23.01■■□□□ 1.27
PHF1-202ENST00000374516 MLH3Q9UHC1 1453 aa23■■□□□ 1.27
PHF1-202ENST00000374516 ARID4BQ4LE39 1312 aaPredicted RBP23■■□□□ 1.27
PHF1-202ENST00000374516 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
PHF1-202ENST00000374516 NEO1Q92859 1461 aa22.99■■□□□ 1.27
PHF1-202ENST00000374516 CLTCL1P53675 1640 aa22.98■■□□□ 1.27
PHF1-202ENST00000374516 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
PHF1-202ENST00000374516 HECW2Q9P2P5 1572 aa22.96■■□□□ 1.27
PHF1-202ENST00000374516 GPRASP1Q5JY77 1395 aa22.96■■□□□ 1.27
PHF1-202ENST00000374516 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
PHF1-202ENST00000374516 FRMPD1Q5SYB0 1578 aa22.95■■□□□ 1.26
PHF1-202ENST00000374516 UGGT1Q9NYU2 1555 aa22.95■■□□□ 1.26
PHF1-202ENST00000374516 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
PHF1-202ENST00000374516 ABCA6Q8N139 1617 aa22.92■■□□□ 1.26
PHF1-202ENST00000374516 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
PHF1-202ENST00000374516 CEP152O94986 1710 aa22.91■■□□□ 1.26
PHF1-202ENST00000374516 MAP3K4Q9Y6R4 1608 aa22.91■■□□□ 1.26
PHF1-202ENST00000374516 WASHC2CQ9Y4E1 1318 aa22.91■■□□□ 1.26
PHF1-202ENST00000374516 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
PHF1-202ENST00000374516 FAM9BQ8IZU0 186 aa22.9■■□□□ 1.26
PHF1-202ENST00000374516 TESK2Q96S53 571 aa22.89■■□□□ 1.25
PHF1-202ENST00000374516 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
PHF1-202ENST00000374516 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
PHF1-202ENST00000374516 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
PHF1-202ENST00000374516 LMTK2Q8IWU2 1503 aa22.86■■□□□ 1.25
PHF1-202ENST00000374516 ZBED9Q6R2W3 1325 aa22.86■■□□□ 1.25
PHF1-202ENST00000374516 YEATS2Q9ULM3 1422 aa22.86■■□□□ 1.25
PHF1-202ENST00000374516 CFAP65Q6ZU64 1925 aaKnown RBP22.85■■□□□ 1.25
PHF1-202ENST00000374516 NPATQ14207 1427 aa22.85■■□□□ 1.25
PHF1-202ENST00000374516 DISP3Q9P2K9 1392 aa22.85■■□□□ 1.25
PHF1-202ENST00000374516 B4GALNT3Q6L9W6 998 aa22.85■■□□□ 1.25
PHF1-202ENST00000374516 GLI2P10070 1586 aa22.84■■□□□ 1.25
PHF1-202ENST00000374516 STAC3Q96MF2 364 aa22.83■■□□□ 1.25
PHF1-202ENST00000374516 LAMC1P11047 1609 aa22.83■■□□□ 1.25
PHF1-202ENST00000374516 RICTORQ6R327 1708 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms