RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
PBX3-205ENST00000373492 EIF2AK4Q9P2K8 1649 aaKnown RBP27.9■■■□□ 2.06
PBX3-205ENST00000373492 CHIC2Q9UKJ5 165 aa27.9■■■□□ 2.06
PBX3-205ENST00000373492 ADGRL2O95490 1459 aa27.89■■■□□ 2.06
PBX3-205ENST00000373492 CLTCQ00610 1675 aaKnown RBP27.89■■■□□ 2.06
PBX3-205ENST00000373492 SETD1BQ9UPS6 1966 aaKnown RBP27.89■■■□□ 2.06
PBX3-205ENST00000373492 NCOA1Q15788 1441 aa27.88■■■□□ 2.05
PBX3-205ENST00000373492 ERBINQ96RT1 1412 aa27.88■■■□□ 2.05
PBX3-205ENST00000373492 NPATQ14207 1427 aa27.87■■■□□ 2.05
PBX3-205ENST00000373492 ITGAEP38570 1179 aa27.87■■■□□ 2.05
PBX3-205ENST00000373492 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
PBX3-205ENST00000373492 RNF17Q9BXT8 1623 aaKnown RBP27.85■■■□□ 2.05
PBX3-205ENST00000373492 KDM5DQ9BY66 1539 aa27.85■■■□□ 2.05
PBX3-205ENST00000373492 PREX1Q8TCU6 1659 aa27.84■■■□□ 2.05
PBX3-205ENST00000373492 PTPRKQ15262 1439 aa27.83■■■□□ 2.05
PBX3-205ENST00000373492 UHRF1BP1Q6BDS2 1440 aa27.83■■■□□ 2.05
PBX3-205ENST00000373492 ROCK1Q13464 1354 aa27.79■■■□□ 2.04
PBX3-205ENST00000373492 HSPA2P54652 639 aa27.77■■■□□ 2.04
PBX3-205ENST00000373492 MROH1Q8NDA8 1641 aa27.76■■■□□ 2.03
PBX3-205ENST00000373492 GCC2Q8IWJ2 1684 aa27.75■■■□□ 2.03
PBX3-205ENST00000373492 ABCC3O15438 1527 aa27.74■■■□□ 2.03
PBX3-205ENST00000373492 PZPP20742 1482 aa27.74■■■□□ 2.03
PBX3-205ENST00000373492 ZC3H13Q5T200 1668 aaKnown RBP27.74■■■□□ 2.03
PBX3-205ENST00000373492 PRDM15P57071 1507 aaPredicted RBP27.72■■■□□ 2.03
PBX3-205ENST00000373492 DEPDC5O75140 1603 aa27.71■■■□□ 2.03
PBX3-205ENST00000373492 ANKRD50Q9ULJ7 1429 aa27.71■■■□□ 2.03
PBX3-205ENST00000373492 KANK1Q14678 1352 aa27.69■■■□□ 2.02
PBX3-205ENST00000373492 CEP152O94986 1710 aa27.68■■■□□ 2.02
PBX3-205ENST00000373492 FBXO31Q5XUX0 539 aaPredicted RBP27.68■■■□□ 2.02
PBX3-205ENST00000373492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.68■■■□□ 2.02
PBX3-205ENST00000373492 TNRQ92752 1358 aa27.65■■■□□ 2.02
PBX3-205ENST00000373492 MYO3AQ8NEV4 1616 aa27.63■■■□□ 2.01
PBX3-205ENST00000373492 ARHGAP31Q2M1Z3 1444 aa27.62■■■□□ 2.01
PBX3-205ENST00000373492 VWDEQ8N2E2 1590 aa27.61■■■□□ 2.01
PBX3-205ENST00000373492 CAMSAP1Q5T5Y3 1602 aa27.61■■■□□ 2.01
PBX3-205ENST00000373492 CFAP65Q6ZU64 1925 aaKnown RBP27.61■■■□□ 2.01
PBX3-205ENST00000373492 UNC13BO14795 1591 aa27.6■■■□□ 2.01
PBX3-205ENST00000373492 LMTK2Q8IWU2 1503 aa27.6■■■□□ 2.01
PBX3-205ENST00000373492 ZNF142P52746 1687 aaPredicted RBP27.59■■■□□ 2.01
PBX3-205ENST00000373492 CEP170BQ9Y4F5 1589 aaPredicted RBP27.59■■■□□ 2.01
PBX3-205ENST00000373492 HFM1A2PYH4 1435 aa27.58■■■□□ 2.01
PBX3-205ENST00000373492 NAIPQ13075 1403 aa27.58■■■□□ 2.01
PBX3-205ENST00000373492 A2ML1A8K2U0 1454 aa27.58■■■□□ 2.01
PBX3-205ENST00000373492 SPATA31D1Q6ZQQ2 1576 aa27.57■■■□□ 2
PBX3-205ENST00000373492 ERVK-7P63135 1459 aa27.57■■■□□ 2
PBX3-205ENST00000373492 DMRT2Q9Y5R5 561 aa27.56■■■□□ 2
PBX3-205ENST00000373492 NLRP1Q9C000 1473 aa27.56■■■□□ 2
PBX3-205ENST00000373492 STRCQ7RTU9 1775 aa27.52■■■□□ 2
PBX3-205ENST00000373492 PLA2R1Q13018 1463 aa27.51■■□□□ 1.99
PBX3-205ENST00000373492 IQGAP3Q86VI3 1631 aa27.5■■□□□ 1.99
PBX3-205ENST00000373492 TET3O43151 1660 aa27.49■■□□□ 1.99
PBX3-205ENST00000373492 EFCAB6Q5THR3 1501 aa27.47■■□□□ 1.99
PBX3-205ENST00000373492 PKD2Q13563 968 aa27.47■■□□□ 1.99
PBX3-205ENST00000373492 THEMISQ8N1K5 641 aaPredicted RBP27.46■■□□□ 1.99
PBX3-205ENST00000373492 PTPRTO14522 1441 aa27.46■■□□□ 1.99
PBX3-205ENST00000373492 RPRD2Q5VT52 1461 aaKnown RBP27.44■■□□□ 1.98
PBX3-205ENST00000373492 UGGT1Q9NYU2 1555 aa27.44■■□□□ 1.98
PBX3-205ENST00000373492 NUP155O75694 1391 aa27.43■■□□□ 1.98
PBX3-205ENST00000373492 NCKAP5LQ9HCH0 1330 aa27.41■■□□□ 1.98
PBX3-205ENST00000373492 NOS1P29475 1434 aa27.41■■□□□ 1.98
PBX3-205ENST00000373492 SETD5Q9C0A6 1442 aa27.41■■□□□ 1.98
PBX3-205ENST00000373492 E9PCH4 1651 aa27.38■■□□□ 1.97
PBX3-205ENST00000373492 ANKLE2Q86XL3 938 aa27.36■■□□□ 1.97
PBX3-205ENST00000373492 ACIN1Q9UKV3 1341 aaKnown RBP27.36■■□□□ 1.97
PBX3-205ENST00000373492 TRIM26Q12899 539 aaPredicted RBP27.35■■□□□ 1.97
PBX3-205ENST00000373492 TRIM52Q96A61 297 aa27.35■■□□□ 1.97
PBX3-205ENST00000373492 SLC52A1Q9NWF4 448 aa27.35■■□□□ 1.97
PBX3-205ENST00000373492 IDI1Q13907 227 aa27.33■■□□□ 1.97
PBX3-205ENST00000373492 SYNMO15061 1565 aa27.33■■□□□ 1.97
PBX3-205ENST00000373492 UBR1Q8IWV7 1749 aa27.31■■□□□ 1.96
PBX3-205ENST00000373492 RAB3GAP2Q9H2M9 1393 aa27.31■■□□□ 1.96
PBX3-205ENST00000373492 STAG3Q9UJ98 1225 aa27.29■■□□□ 1.96
PBX3-205ENST00000373492 SPHKAPQ2M3C7 1700 aa27.29■■□□□ 1.96
PBX3-205ENST00000373492 PIK3C2BO00750 1634 aa27.28■■□□□ 1.96
PBX3-205ENST00000373492 POLR1AO95602 1720 aaPredicted RBP27.27■■□□□ 1.96
PBX3-205ENST00000373492 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
PBX3-205ENST00000373492 MED14O60244 1454 aa27.25■■□□□ 1.95
PBX3-205ENST00000373492 NEURL4Q96JN8 1562 aa27.25■■□□□ 1.95
PBX3-205ENST00000373492 SLIT1O75093 1534 aa27.25■■□□□ 1.95
PBX3-205ENST00000373492 ARHGAP23Q9P227 1491 aa27.25■■□□□ 1.95
PBX3-205ENST00000373492 TMEM2Q9UHN6 1383 aa27.22■■□□□ 1.95
PBX3-205ENST00000373492 NPHP4O75161 1426 aaPredicted RBP27.22■■□□□ 1.95
PBX3-205ENST00000373492 CERKQ8TCT0 537 aa27.21■■□□□ 1.95
PBX3-205ENST00000373492 SLC4A1APQ9BWU0 796 aaKnown RBP27.21■■□□□ 1.95
PBX3-205ENST00000373492 EID1Q9Y6B2 187 aa27.21■■□□□ 1.95
PBX3-205ENST00000373492 ADGRB3O60242 1522 aa27.21■■□□□ 1.95
PBX3-205ENST00000373492 HRCP23327 699 aa27.2■■□□□ 1.94
PBX3-205ENST00000373492 TXNDC2Q86VQ3 553 aa27.2■■□□□ 1.94
PBX3-205ENST00000373492 SCAF11Q99590 1463 aaKnown RBP27.19■■□□□ 1.94
PBX3-205ENST00000373492 LTKP29376 864 aa27.18■■□□□ 1.94
PBX3-205ENST00000373492 MYO5BQ9ULV0 1848 aa27.17■■□□□ 1.94
PBX3-205ENST00000373492 LTBP4Q8N2S1 1624 aa27.16■■□□□ 1.94
PBX3-205ENST00000373492 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
PBX3-205ENST00000373492 KIF1BO60333 1816 aa27.14■■□□□ 1.94
PBX3-205ENST00000373492 MPHOSPH9Q99550 1183 aa27.14■■□□□ 1.94
PBX3-205ENST00000373492 IQGAP1P46940 1657 aa27.14■■□□□ 1.93
PBX3-205ENST00000373492 FBXO41Q8TF61 875 aa27.12■■□□□ 1.93
PBX3-205ENST00000373492 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
PBX3-205ENST00000373492 ILDR1Q86SU0 546 aaPredicted RBP27.11■■□□□ 1.93
PBX3-205ENST00000373492 CHGAP10645 457 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms