RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 KIF3BO15066 747 aa30.73■■■□□ 2.51
SYNC-201ENST00000373484 PTPRMP28827 1452 aa30.7■■■□□ 2.5
SYNC-201ENST00000373484 GGT6Q6P531 493 aa30.69■■■□□ 2.5
SYNC-201ENST00000373484 MROH1Q8NDA8 1641 aa30.66■■■□□ 2.5
SYNC-201ENST00000373484 CLTCQ00610 1675 aaKnown RBP30.66■■■□□ 2.5
SYNC-201ENST00000373484 DEPDC5O75140 1603 aa30.66■■■□□ 2.5
SYNC-201ENST00000373484 MROH2AA6NES4 1674 aa30.66■■■□□ 2.5
SYNC-201ENST00000373484 ANKRD50Q9ULJ7 1429 aa30.65■■■□□ 2.5
SYNC-201ENST00000373484 CNTLNQ9NXG0 1405 aa30.64■■■□□ 2.5
SYNC-201ENST00000373484 FAM135AQ9P2D6 1515 aa30.64■■■□□ 2.5
SYNC-201ENST00000373484 PPP6R1Q9UPN7 881 aa30.64■■■□□ 2.5
SYNC-201ENST00000373484 GCC2Q8IWJ2 1684 aa30.62■■■□□ 2.49
SYNC-201ENST00000373484 PRDM15P57071 1507 aaPredicted RBP30.61■■■□□ 2.49
SYNC-201ENST00000373484 C3P01024 1663 aa30.61■■■□□ 2.49
SYNC-201ENST00000373484 ESF1Q9H501 851 aaKnown RBP30.61■■■□□ 2.49
SYNC-201ENST00000373484 KDM5DQ9BY66 1539 aa30.6■■■□□ 2.49
SYNC-201ENST00000373484 AEBP2Q6ZN18 517 aaPredicted RBP30.6■■■□□ 2.49
SYNC-201ENST00000373484 ZC3H13Q5T200 1668 aaKnown RBP30.59■■■□□ 2.49
SYNC-201ENST00000373484 CEP152O94986 1710 aa30.56■■■□□ 2.48
SYNC-201ENST00000373484 NAIPQ13075 1403 aa30.54■■■□□ 2.48
SYNC-201ENST00000373484 ABCC3O15438 1527 aa30.53■■■□□ 2.48
SYNC-201ENST00000373484 HFM1A2PYH4 1435 aa30.53■■■□□ 2.48
SYNC-201ENST00000373484 UNC13BO14795 1591 aa30.53■■■□□ 2.48
SYNC-201ENST00000373484 WASHC2CQ9Y4E1 1318 aa30.51■■■□□ 2.48
SYNC-201ENST00000373484 VWDEQ8N2E2 1590 aa30.51■■■□□ 2.47
SYNC-201ENST00000373484 ZMYM3Q14202 1370 aa30.51■■■□□ 2.47
SYNC-201ENST00000373484 CEBPAP49715 358 aaPredicted RBP30.48■■■□□ 2.47
SYNC-201ENST00000373484 CAMSAP1Q5T5Y3 1602 aa30.48■■■□□ 2.47
SYNC-201ENST00000373484 KANK1Q14678 1352 aa30.46■■■□□ 2.47
SYNC-201ENST00000373484 PLPPR3Q6T4P5 718 aa30.46■■■□□ 2.47
SYNC-201ENST00000373484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.46■■■□□ 2.47
SYNC-201ENST00000373484 SETD1BQ9UPS6 1966 aaKnown RBP30.44■■■□□ 2.46
SYNC-201ENST00000373484 PELP1Q8IZL8 1130 aaKnown RBP30.43■■■□□ 2.46
SYNC-201ENST00000373484 LMTK2Q8IWU2 1503 aa30.43■■■□□ 2.46
SYNC-201ENST00000373484 PZPP20742 1482 aa30.41■■■□□ 2.46
SYNC-201ENST00000373484 IQGAP3Q86VI3 1631 aa30.4■■■□□ 2.46
SYNC-201ENST00000373484 NPATQ14207 1427 aa30.39■■■□□ 2.45
SYNC-201ENST00000373484 PREX1Q8TCU6 1659 aa30.38■■■□□ 2.45
SYNC-201ENST00000373484 CFAP65Q6ZU64 1925 aaKnown RBP30.37■■■□□ 2.45
SYNC-201ENST00000373484 TET3O43151 1660 aa30.37■■■□□ 2.45
SYNC-201ENST00000373484 EFCAB6Q5THR3 1501 aa30.35■■■□□ 2.45
SYNC-201ENST00000373484 ARHGAP31Q2M1Z3 1444 aa30.35■■■□□ 2.45
SYNC-201ENST00000373484 NUP155O75694 1391 aa30.32■■■□□ 2.44
SYNC-201ENST00000373484 SETD5Q9C0A6 1442 aa30.3■■■□□ 2.44
SYNC-201ENST00000373484 SPATA31D1Q6ZQQ2 1576 aa30.3■■■□□ 2.44
SYNC-201ENST00000373484 FBXO31Q5XUX0 539 aaPredicted RBP30.29■■■□□ 2.44
SYNC-201ENST00000373484 MYO3AQ8NEV4 1616 aa30.28■■■□□ 2.44
SYNC-201ENST00000373484 LMTK3Q96Q04 1460 aa30.27■■■□□ 2.44
SYNC-201ENST00000373484 ERVK-7P63135 1459 aa30.27■■■□□ 2.44
SYNC-201ENST00000373484 E9PCH4 1651 aa30.26■■■□□ 2.44
SYNC-201ENST00000373484 UHRF1BP1Q6BDS2 1440 aa30.25■■■□□ 2.43
SYNC-201ENST00000373484 RPRD2Q5VT52 1461 aaKnown RBP30.24■■■□□ 2.43
SYNC-201ENST00000373484 ZNF142P52746 1687 aaPredicted RBP30.23■■■□□ 2.43
SYNC-201ENST00000373484 TNRQ92752 1358 aa30.23■■■□□ 2.43
SYNC-201ENST00000373484 RAB3GAP2Q9H2M9 1393 aa30.2■■■□□ 2.43
SYNC-201ENST00000373484 TRIM52Q96A61 297 aa30.19■■■□□ 2.42
SYNC-201ENST00000373484 CEP170BQ9Y4F5 1589 aaPredicted RBP30.18■■■□□ 2.42
SYNC-201ENST00000373484 NOS1P29475 1434 aa30.16■■■□□ 2.42
SYNC-201ENST00000373484 ACIN1Q9UKV3 1341 aaKnown RBP30.16■■■□□ 2.42
SYNC-201ENST00000373484 SYNMO15061 1565 aa30.16■■■□□ 2.42
SYNC-201ENST00000373484 NLRP1Q9C000 1473 aa30.15■■■□□ 2.42
SYNC-201ENST00000373484 A2ML1A8K2U0 1454 aa30.13■■■□□ 2.41
SYNC-201ENST00000373484 SPHKAPQ2M3C7 1700 aa30.11■■■□□ 2.41
SYNC-201ENST00000373484 SLC4A1APQ9BWU0 796 aaKnown RBP30.07■■■□□ 2.4
SYNC-201ENST00000373484 HSPA2P54652 639 aa30.06■■■□□ 2.4
SYNC-201ENST00000373484 PIK3C2BO00750 1634 aa30.06■■■□□ 2.4
SYNC-201ENST00000373484 UBR1Q8IWV7 1749 aa30.05■■■□□ 2.4
SYNC-201ENST00000373484 UGGT1Q9NYU2 1555 aa30.05■■■□□ 2.4
SYNC-201ENST00000373484 KDM5AP29375 1690 aaKnown RBP30.03■■■□□ 2.4
SYNC-201ENST00000373484 PKD2Q13563 968 aa30.03■■■□□ 2.4
SYNC-201ENST00000373484 PTPRTO14522 1441 aa30.02■■■□□ 2.4
SYNC-201ENST00000373484 MPHOSPH9Q99550 1183 aa30.01■■■□□ 2.4
SYNC-201ENST00000373484 SLC52A1Q9NWF4 448 aa29.99■■■□□ 2.39
SYNC-201ENST00000373484 STRCQ7RTU9 1775 aa29.99■■■□□ 2.39
SYNC-201ENST00000373484 IDI1Q13907 227 aa29.99■■■□□ 2.39
SYNC-201ENST00000373484 SCAF1Q9H7N4 1312 aaKnown RBP29.98■■■□□ 2.39
SYNC-201ENST00000373484 TRPM2O94759 1503 aa29.98■■■□□ 2.39
SYNC-201ENST00000373484 PLA2R1Q13018 1463 aa29.96■■■□□ 2.39
SYNC-201ENST00000373484 MYO5BQ9ULV0 1848 aa29.96■■■□□ 2.39
SYNC-201ENST00000373484 ADGRB3O60242 1522 aa29.95■■■□□ 2.39
SYNC-201ENST00000373484 CCER1Q8TC90 406 aaPredicted RBP29.95■■■□□ 2.39
SYNC-201ENST00000373484 THEMISQ8N1K5 641 aaPredicted RBP29.93■■■□□ 2.38
SYNC-201ENST00000373484 CLTCL1P53675 1640 aa29.92■■■□□ 2.38
SYNC-201ENST00000373484 TMEM131LA2VDJ0 1609 aa29.92■■■□□ 2.38
SYNC-201ENST00000373484 POLR1AO95602 1720 aaPredicted RBP29.91■■■□□ 2.38
SYNC-201ENST00000373484 FOXD1Q16676 465 aa29.9■■■□□ 2.38
SYNC-201ENST00000373484 KIF1BO60333 1816 aa29.88■■■□□ 2.37
SYNC-201ENST00000373484 STAG3Q9UJ98 1225 aa29.87■■■□□ 2.37
SYNC-201ENST00000373484 SLIT1O75093 1534 aa29.87■■■□□ 2.37
SYNC-201ENST00000373484 ARHGAP23Q9P227 1491 aa29.85■■■□□ 2.37
SYNC-201ENST00000373484 NEURL4Q96JN8 1562 aa29.81■■■□□ 2.36
SYNC-201ENST00000373484 TMEM2Q9UHN6 1383 aa29.81■■■□□ 2.36
SYNC-201ENST00000373484 NCKAP5LQ9HCH0 1330 aa29.79■■■□□ 2.36
SYNC-201ENST00000373484 CHGAP10645 457 aaKnown RBP29.78■■■□□ 2.36
SYNC-201ENST00000373484 ANKLE2Q86XL3 938 aa29.78■■■□□ 2.36
SYNC-201ENST00000373484 CCDC144AA2RUR9 1427 aa29.77■■■□□ 2.36
SYNC-201ENST00000373484 SCAF11Q99590 1463 aaKnown RBP29.75■■■□□ 2.35
SYNC-201ENST00000373484 MED14O60244 1454 aa29.74■■■□□ 2.35
SYNC-201ENST00000373484 DMRT2Q9Y5R5 561 aa29.74■■■□□ 2.35
SYNC-201ENST00000373484 ZFYVE9O95405 1425 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms