RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 MS4A1P11836 297 aa23.37■■□□□ 1.33
VPS26A-202ENST00000373382 PDE3BQ13370 1112 aa23.37■■□□□ 1.33
VPS26A-202ENST00000373382 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
VPS26A-202ENST00000373382 MBD5Q9P267 1494 aa23.36■■□□□ 1.33
VPS26A-202ENST00000373382 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
VPS26A-202ENST00000373382 KDM5CP41229 1560 aa23.35■■□□□ 1.33
VPS26A-202ENST00000373382 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
VPS26A-202ENST00000373382 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
VPS26A-202ENST00000373382 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
VPS26A-202ENST00000373382 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
VPS26A-202ENST00000373382 DDRGK1Q96HY6 314 aa23.32■■□□□ 1.32
VPS26A-202ENST00000373382 USP35Q9P2H5 1018 aa23.31■■□□□ 1.32
VPS26A-202ENST00000373382 POLR1AO95602 1720 aaPredicted RBP23.31■■□□□ 1.32
VPS26A-202ENST00000373382 GPATCH8Q9UKJ3 1502 aaKnown RBP23.31■■□□□ 1.32
VPS26A-202ENST00000373382 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
VPS26A-202ENST00000373382 NFKBIBQ15653 356 aa23.29■■□□□ 1.32
VPS26A-202ENST00000373382 ADAMTS8Q9UP79 889 aa23.29■■□□□ 1.32
VPS26A-202ENST00000373382 KIF14Q15058 1648 aa23.28■■□□□ 1.32
VPS26A-202ENST00000373382 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
VPS26A-202ENST00000373382 WDR43Q15061 677 aaKnown RBP eCLIP23.27■■□□□ 1.32
VPS26A-202ENST00000373382 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
VPS26A-202ENST00000373382 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
VPS26A-202ENST00000373382 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
VPS26A-202ENST00000373382 GSE1Q14687 1217 aa23.25■■□□□ 1.31
VPS26A-202ENST00000373382 KIAA0586Q9BVV6 1533 aa23.25■■□□□ 1.31
VPS26A-202ENST00000373382 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
VPS26A-202ENST00000373382 C9orf84Q5VXU9 1444 aa23.23■■□□□ 1.31
VPS26A-202ENST00000373382 EIF5BO60841 1220 aaKnown RBP23.23■■□□□ 1.31
VPS26A-202ENST00000373382 UHRF1BP1Q6BDS2 1440 aa23.23■■□□□ 1.31
VPS26A-202ENST00000373382 FRAT1Q92837 279 aaPredicted RBP23.22■■□□□ 1.31
VPS26A-202ENST00000373382 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
VPS26A-202ENST00000373382 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
VPS26A-202ENST00000373382 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
VPS26A-202ENST00000373382 RAPGEF6Q8TEU7 1601 aa23.2■■□□□ 1.3
VPS26A-202ENST00000373382 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
VPS26A-202ENST00000373382 TMF1P82094 1093 aa23.19■■□□□ 1.3
VPS26A-202ENST00000373382 KIAA0556O60303 1618 aa23.18■■□□□ 1.3
VPS26A-202ENST00000373382 CCDC144AA2RUR9 1427 aa23.18■■□□□ 1.3
VPS26A-202ENST00000373382 JPH4Q96JJ6 628 aa23.18■■□□□ 1.3
VPS26A-202ENST00000373382 KNSTRNQ9Y448 316 aa23.18■■□□□ 1.3
VPS26A-202ENST00000373382 FRAT2O75474 233 aaPredicted RBP23.16■■□□□ 1.3
VPS26A-202ENST00000373382 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
VPS26A-202ENST00000373382 CENPQQ7L2Z9 268 aaPredicted RBP23.14■■□□□ 1.3
VPS26A-202ENST00000373382 ARXQ96QS3 562 aa23.13■■□□□ 1.29
VPS26A-202ENST00000373382 TESK2Q96S53 571 aa23.13■■□□□ 1.29
VPS26A-202ENST00000373382 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
VPS26A-202ENST00000373382 WASHC2CQ9Y4E1 1318 aa23.13■■□□□ 1.29
VPS26A-202ENST00000373382 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.12■■□□□ 1.29
VPS26A-202ENST00000373382 ADGRL2O95490 1459 aa23.12■■□□□ 1.29
VPS26A-202ENST00000373382 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
VPS26A-202ENST00000373382 C8orf34Q49A92 452 aa23.09■■□□□ 1.29
VPS26A-202ENST00000373382 PLEKHH1Q9ULM0 1364 aa23.09■■□□□ 1.29
VPS26A-202ENST00000373382 BCAR3O75815 825 aa23.08■■□□□ 1.29
VPS26A-202ENST00000373382 CANXP27824 592 aaKnown RBP23.08■■□□□ 1.29
VPS26A-202ENST00000373382 PPP2R1AP30153 589 aa23.08■■□□□ 1.29
VPS26A-202ENST00000373382 PRAG1Q86YV5 1406 aa23.08■■□□□ 1.28
VPS26A-202ENST00000373382 KDM2BQ8NHM5 1336 aa23.07■■□□□ 1.28
VPS26A-202ENST00000373382 ARHGEF12Q9NZN5 1544 aa23.06■■□□□ 1.28
VPS26A-202ENST00000373382 APAF1O14727 1248 aa23.06■■□□□ 1.28
VPS26A-202ENST00000373382 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
VPS26A-202ENST00000373382 SLKQ9H2G2 1235 aaPredicted RBP23.05■■□□□ 1.28
VPS26A-202ENST00000373382 ADGBQ8N7X0 1667 aa23.05■■□□□ 1.28
VPS26A-202ENST00000373382 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
VPS26A-202ENST00000373382 NEUROD2Q15784 382 aa23.05■■□□□ 1.28
VPS26A-202ENST00000373382 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
VPS26A-202ENST00000373382 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
VPS26A-202ENST00000373382 ITSN2Q9NZM3 1697 aa23.02■■□□□ 1.28
VPS26A-202ENST00000373382 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
VPS26A-202ENST00000373382 BLMP54132 1417 aaPredicted RBP23■■□□□ 1.27
VPS26A-202ENST00000373382 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
VPS26A-202ENST00000373382 TNNT2P45379 298 aaPredicted RBP22.97■■□□□ 1.27
VPS26A-202ENST00000373382 COG6Q9Y2V7 657 aa22.97■■□□□ 1.27
VPS26A-202ENST00000373382 IGHDP01880 384 aa22.97■■□□□ 1.27
VPS26A-202ENST00000373382 SPRYD3Q8NCJ5 442 aa22.97■■□□□ 1.27
VPS26A-202ENST00000373382 COL17A1Q9UMD9 1497 aaPredicted RBP22.96■■□□□ 1.27
VPS26A-202ENST00000373382 FAM135AQ9P2D6 1515 aa22.96■■□□□ 1.27
VPS26A-202ENST00000373382 SLFN5Q08AF3 891 aa22.96■■□□□ 1.27
VPS26A-202ENST00000373382 PANK1Q8TE04 598 aa22.95■■□□□ 1.27
VPS26A-202ENST00000373382 A2MP01023 1474 aa22.95■■□□□ 1.26
VPS26A-202ENST00000373382 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
VPS26A-202ENST00000373382 SEC24BO95487 1268 aa22.94■■□□□ 1.26
VPS26A-202ENST00000373382 ATP10BO94823 1461 aa22.94■■□□□ 1.26
VPS26A-202ENST00000373382 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
VPS26A-202ENST00000373382 DMRT2Q9Y5R5 561 aa22.93■■□□□ 1.26
VPS26A-202ENST00000373382 KDM5DQ9BY66 1539 aa22.93■■□□□ 1.26
VPS26A-202ENST00000373382 ZMYM4Q5VZL5 1548 aa22.93■■□□□ 1.26
VPS26A-202ENST00000373382 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
VPS26A-202ENST00000373382 POGKQ9P215 609 aa22.92■■□□□ 1.26
VPS26A-202ENST00000373382 RRP7AQ9Y3A4 280 aaKnown RBP22.91■■□□□ 1.26
VPS26A-202ENST00000373382 CROCC2H7BZ55 1655 aa22.91■■□□□ 1.26
VPS26A-202ENST00000373382 BCL2L13Q9BXK5 485 aa22.91■■□□□ 1.26
VPS26A-202ENST00000373382 E9PCH4 1651 aa22.9■■□□□ 1.26
VPS26A-202ENST00000373382 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
VPS26A-202ENST00000373382 PTPRGP23470 1445 aa22.88■■□□□ 1.25
VPS26A-202ENST00000373382 CLUAP1Q96AJ1 413 aa22.88■■□□□ 1.25
VPS26A-202ENST00000373382 MAGI2Q86UL8 1455 aa22.87■■□□□ 1.25
VPS26A-202ENST00000373382 ABCC10Q5T3U5 1492 aa22.86■■□□□ 1.25
VPS26A-202ENST00000373382 SHANK2Q9UPX8 1470 aa22.86■■□□□ 1.25
VPS26A-202ENST00000373382 GPRASP1Q5JY77 1395 aa22.86■■□□□ 1.25
VPS26A-202ENST00000373382 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms