RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 POGKQ9P215 609 aa23.09■■□□□ 1.29
TRAF3IP1-201ENST00000373327 ERICH6BQ5W0A0 696 aa23.07■■□□□ 1.28
TRAF3IP1-201ENST00000373327 PNISRQ8TF01 805 aaKnown RBP23.06■■□□□ 1.28
TRAF3IP1-201ENST00000373327 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
TRAF3IP1-201ENST00000373327 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
TRAF3IP1-201ENST00000373327 RRP1P56182 461 aaKnown RBP23.05■■□□□ 1.28
TRAF3IP1-201ENST00000373327 NCOA1Q15788 1441 aa23.05■■□□□ 1.28
TRAF3IP1-201ENST00000373327 CLUAP1Q96AJ1 413 aa23.05■■□□□ 1.28
TRAF3IP1-201ENST00000373327 BCL2L13Q9BXK5 485 aa23.04■■□□□ 1.28
TRAF3IP1-201ENST00000373327 CRBNQ96SW2 442 aa23.04■■□□□ 1.28
TRAF3IP1-201ENST00000373327 SOX12O15370 315 aa23.04■■□□□ 1.28
TRAF3IP1-201ENST00000373327 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
TRAF3IP1-201ENST00000373327 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
TRAF3IP1-201ENST00000373327 SKAP1Q86WV1 359 aa23.03■■□□□ 1.28
TRAF3IP1-201ENST00000373327 APAF1O14727 1248 aa23.02■■□□□ 1.28
TRAF3IP1-201ENST00000373327 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
TRAF3IP1-201ENST00000373327 CFAP43Q8NDM7 1665 aa23.02■■□□□ 1.28
TRAF3IP1-201ENST00000373327 ADAMTS8Q9UP79 889 aa23.02■■□□□ 1.27
TRAF3IP1-201ENST00000373327 ARHGAP5Q13017 1502 aa23.01■■□□□ 1.27
TRAF3IP1-201ENST00000373327 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
TRAF3IP1-201ENST00000373327 SLC4A3P48751 1232 aa23■■□□□ 1.27
TRAF3IP1-201ENST00000373327 TMEM132EQ6IEE7 984 aa23■■□□□ 1.27
TRAF3IP1-201ENST00000373327 RTN4Q9NQC3 1192 aaKnown RBP23■■□□□ 1.27
TRAF3IP1-201ENST00000373327 U2AF1L5P0DN76 240 aaPredicted RBP22.99■■□□□ 1.27
TRAF3IP1-201ENST00000373327 U2AF1Q01081 240 aaKnown RBP eCLIP22.99■■□□□ 1.27
TRAF3IP1-201ENST00000373327 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
TRAF3IP1-201ENST00000373327 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
TRAF3IP1-201ENST00000373327 WASHC2CQ9Y4E1 1318 aa22.99■■□□□ 1.27
TRAF3IP1-201ENST00000373327 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
TRAF3IP1-201ENST00000373327 ROCK1Q13464 1354 aa22.98■■□□□ 1.27
TRAF3IP1-201ENST00000373327 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
TRAF3IP1-201ENST00000373327 DEKP35659 375 aaKnown RBP22.98■■□□□ 1.27
TRAF3IP1-201ENST00000373327 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
TRAF3IP1-201ENST00000373327 RPRD2Q5VT52 1461 aaKnown RBP22.97■■□□□ 1.27
TRAF3IP1-201ENST00000373327 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
TRAF3IP1-201ENST00000373327 UPF2Q9HAU5 1272 aaKnown RBP22.96■■□□□ 1.27
TRAF3IP1-201ENST00000373327 ARID4BQ4LE39 1312 aaPredicted RBP22.95■■□□□ 1.26
TRAF3IP1-201ENST00000373327 GPATCH8Q9UKJ3 1502 aaKnown RBP22.93■■□□□ 1.26
TRAF3IP1-201ENST00000373327 MSH5O43196 834 aa22.92■■□□□ 1.26
TRAF3IP1-201ENST00000373327 SPRYD3Q8NCJ5 442 aa22.92■■□□□ 1.26
TRAF3IP1-201ENST00000373327 MAPK8IP3Q9UPT6 1336 aa22.91■■□□□ 1.26
TRAF3IP1-201ENST00000373327 MAGI1Q96QZ7 1491 aaPredicted RBP22.91■■□□□ 1.26
TRAF3IP1-201ENST00000373327 PDE4AP27815 886 aa22.89■■□□□ 1.25
TRAF3IP1-201ENST00000373327 NUTM2FA1L443 756 aa22.89■■□□□ 1.25
TRAF3IP1-201ENST00000373327 ZBTB7CA1YPR0 619 aa22.89■■□□□ 1.25
TRAF3IP1-201ENST00000373327 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.25
TRAF3IP1-201ENST00000373327 HSP90AA1P07900 732 aaKnown RBP22.88■■□□□ 1.25
TRAF3IP1-201ENST00000373327 PAK3O75914 559 aaPredicted RBP22.88■■□□□ 1.25
TRAF3IP1-201ENST00000373327 PDE3BQ13370 1112 aa22.87■■□□□ 1.25
TRAF3IP1-201ENST00000373327 TCERG1O14776 1098 aaKnown RBP22.85■■□□□ 1.25
TRAF3IP1-201ENST00000373327 C14orf37Q86TY3 774 aa22.85■■□□□ 1.25
TRAF3IP1-201ENST00000373327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.84■■□□□ 1.25
TRAF3IP1-201ENST00000373327 COG6Q9Y2V7 657 aa22.84■■□□□ 1.25
TRAF3IP1-201ENST00000373327 KDM6BO15054 1643 aa22.84■■□□□ 1.25
TRAF3IP1-201ENST00000373327 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.25
TRAF3IP1-201ENST00000373327 BRD4O60885 1362 aaPredicted RBP22.83■■□□□ 1.24
TRAF3IP1-201ENST00000373327 PPP2R1AP30153 589 aa22.82■■□□□ 1.24
TRAF3IP1-201ENST00000373327 FANCIQ9NVI1 1328 aa22.82■■□□□ 1.24
TRAF3IP1-201ENST00000373327 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
TRAF3IP1-201ENST00000373327 DDRGK1Q96HY6 314 aa22.82■■□□□ 1.24
TRAF3IP1-201ENST00000373327 SCAPERQ9BY12 1400 aa22.82■■□□□ 1.24
TRAF3IP1-201ENST00000373327 WDR62O43379 1518 aa22.8■■□□□ 1.24
TRAF3IP1-201ENST00000373327 ATP10BO94823 1461 aa22.8■■□□□ 1.24
TRAF3IP1-201ENST00000373327 SLC12A5Q9H2X9 1139 aa22.79■■□□□ 1.24
TRAF3IP1-201ENST00000373327 EIF3AQ14152 1382 aaKnown RBP22.78■■□□□ 1.24
TRAF3IP1-201ENST00000373327 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
TRAF3IP1-201ENST00000373327 PLEKHH2Q8IVE3 1493 aa22.78■■□□□ 1.24
TRAF3IP1-201ENST00000373327 ADAMTS12P58397 1594 aa22.77■■□□□ 1.24
TRAF3IP1-201ENST00000373327 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
TRAF3IP1-201ENST00000373327 SLKQ9H2G2 1235 aaPredicted RBP22.77■■□□□ 1.24
TRAF3IP1-201ENST00000373327 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
TRAF3IP1-201ENST00000373327 ELL2O00472 640 aaPredicted RBP22.77■■□□□ 1.23
TRAF3IP1-201ENST00000373327 C20orf194Q5TEA3 1177 aa22.76■■□□□ 1.23
TRAF3IP1-201ENST00000373327 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
TRAF3IP1-201ENST00000373327 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
TRAF3IP1-201ENST00000373327 TCOF1Q13428 1488 aaKnown RBP22.75■■□□□ 1.23
TRAF3IP1-201ENST00000373327 RAPGEF3O95398 923 aa22.74■■□□□ 1.23
TRAF3IP1-201ENST00000373327 BCAR3O75815 825 aa22.74■■□□□ 1.23
TRAF3IP1-201ENST00000373327 PANK1Q8TE04 598 aa22.74■■□□□ 1.23
TRAF3IP1-201ENST00000373327 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
TRAF3IP1-201ENST00000373327 EIF5BO60841 1220 aaKnown RBP22.73■■□□□ 1.23
TRAF3IP1-201ENST00000373327 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
TRAF3IP1-201ENST00000373327 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
TRAF3IP1-201ENST00000373327 DISP3Q9P2K9 1392 aa22.72■■□□□ 1.23
TRAF3IP1-201ENST00000373327 KIAA0556O60303 1618 aa22.72■■□□□ 1.23
TRAF3IP1-201ENST00000373327 APBB1O00213 710 aa22.71■■□□□ 1.23
TRAF3IP1-201ENST00000373327 SMG6Q86US8 1419 aaKnown RBP22.71■■□□□ 1.23
TRAF3IP1-201ENST00000373327 ITPRIPQ8IWB1 547 aa22.71■■□□□ 1.23
TRAF3IP1-201ENST00000373327 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
TRAF3IP1-201ENST00000373327 SMC4Q9NTJ3 1288 aa22.7■■□□□ 1.22
TRAF3IP1-201ENST00000373327 PZPP20742 1482 aa22.69■■□□□ 1.22
TRAF3IP1-201ENST00000373327 MTHFSP49914 203 aa22.68■■□□□ 1.22
TRAF3IP1-201ENST00000373327 KIF14Q15058 1648 aa22.67■■□□□ 1.22
TRAF3IP1-201ENST00000373327 BECN1Q14457 450 aa22.65■■□□□ 1.22
TRAF3IP1-201ENST00000373327 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
TRAF3IP1-201ENST00000373327 ADGRF5Q8IZF2 1346 aa22.64■■□□□ 1.21
TRAF3IP1-201ENST00000373327 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.21
TRAF3IP1-201ENST00000373327 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
TRAF3IP1-201ENST00000373327 MYH16Q9H6N6 1097 aa22.62■■□□□ 1.21
TRAF3IP1-201ENST00000373327 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms