RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
PABPC4-203ENST00000372858 RALBP1Q15311 655 aa22.15■■□□□ 1.14
PABPC4-203ENST00000372858 BRD4O60885 1362 aaPredicted RBP22.15■■□□□ 1.14
PABPC4-203ENST00000372858 MYBBP1AQ9BQG0 1328 aaKnown RBP22.15■■□□□ 1.14
PABPC4-203ENST00000372858 RTL5Q5HYW3 569 aaPredicted RBP22.14■■□□□ 1.14
PABPC4-203ENST00000372858 CDC42BPAQ5VT25 1732 aa22.13■■□□□ 1.13
PABPC4-203ENST00000372858 RRP1P56182 461 aaKnown RBP22.13■■□□□ 1.13
PABPC4-203ENST00000372858 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
PABPC4-203ENST00000372858 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
PABPC4-203ENST00000372858 ABCC10Q5T3U5 1492 aa22.11■■□□□ 1.13
PABPC4-203ENST00000372858 HNRNPMP52272 730 aaKnown RBP eCLIP22.11■■□□□ 1.131e-6■■■■□ 26
PABPC4-203ENST00000372858 ATP10BO94823 1461 aa22.1■■□□□ 1.13
PABPC4-203ENST00000372858 NUP160Q12769 1436 aa22.1■■□□□ 1.13
PABPC4-203ENST00000372858 KDM5DQ9BY66 1539 aa22.09■■□□□ 1.13
PABPC4-203ENST00000372858 EXOC6Q8TAG9 804 aa22.09■■□□□ 1.13
PABPC4-203ENST00000372858 RCAN3Q9UKA8 241 aa22.09■■□□□ 1.13
PABPC4-203ENST00000372858 TCERG1O14776 1098 aaKnown RBP22.08■■□□□ 1.13
PABPC4-203ENST00000372858 ABCA8O94911 1581 aa22.06■■□□□ 1.12
PABPC4-203ENST00000372858 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
PABPC4-203ENST00000372858 PTPRGP23470 1445 aa22.05■■□□□ 1.12
PABPC4-203ENST00000372858 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
PABPC4-203ENST00000372858 NPM2Q86SE8 214 aaKnown RBP22.04■■□□□ 1.12
PABPC4-203ENST00000372858 NLRP13Q86W25 1043 aa22.03■■□□□ 1.12
PABPC4-203ENST00000372858 PDE4AP27815 886 aa22.01■■□□□ 1.11
PABPC4-203ENST00000372858 ARHGEF5Q12774 1597 aa22■■□□□ 1.11
PABPC4-203ENST00000372858 RSPH4AQ5TD94 716 aa22■■□□□ 1.11
PABPC4-203ENST00000372858 CCDC144AA2RUR9 1427 aa22■■□□□ 1.11
PABPC4-203ENST00000372858 RGL3Q3MIN7 710 aa21.99■■□□□ 1.11
PABPC4-203ENST00000372858 MS4A1P11836 297 aa21.98■■□□□ 1.11
PABPC4-203ENST00000372858 FAM135AQ9P2D6 1515 aa21.98■■□□□ 1.11
PABPC4-203ENST00000372858 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
PABPC4-203ENST00000372858 BACH2Q9BYV9 841 aa21.97■■□□□ 1.11
PABPC4-203ENST00000372858 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
PABPC4-203ENST00000372858 PARD3Q8TEW0 1356 aa21.95■■□□□ 1.11
PABPC4-203ENST00000372858 E9PCH4 1651 aa21.95■■□□□ 1.1
PABPC4-203ENST00000372858 NBPF1Q3BBV0 1214 aa21.94■■□□□ 1.1
PABPC4-203ENST00000372858 CDCA7LQ96GN5 454 aa21.93■■□□□ 1.1
PABPC4-203ENST00000372858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.18e-9■■■□□ 14.9
PABPC4-203ENST00000372858 PER1O15534 1290 aaPredicted RBP21.92■■□□□ 1.1
PABPC4-203ENST00000372858 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
PABPC4-203ENST00000372858 TRPM1Q7Z4N2 1603 aa21.9■■□□□ 1.1
PABPC4-203ENST00000372858 WASHC2CQ9Y4E1 1318 aa21.89■■□□□ 1.09
PABPC4-203ENST00000372858 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.09
PABPC4-203ENST00000372858 USP35Q9P2H5 1018 aa21.88■■□□□ 1.09
PABPC4-203ENST00000372858 CC2D1BQ5T0F9 858 aaKnown RBP21.88■■□□□ 1.09
PABPC4-203ENST00000372858 PLIN1O60240 522 aa21.87■■□□□ 1.09
PABPC4-203ENST00000372858 NEFMP07197 916 aa21.87■■□□□ 1.09
PABPC4-203ENST00000372858 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
PABPC4-203ENST00000372858 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
PABPC4-203ENST00000372858 PREX2Q70Z35 1606 aa21.86■■□□□ 1.09
PABPC4-203ENST00000372858 PPM1GO15355 546 aaPredicted RBP21.84■■□□□ 1.09
PABPC4-203ENST00000372858 A2MP01023 1474 aa21.84■■□□□ 1.09
PABPC4-203ENST00000372858 TESK2Q96S53 571 aa21.84■■□□□ 1.09
PABPC4-203ENST00000372858 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
PABPC4-203ENST00000372858 PANK3Q9H999 370 aa21.84■■□□□ 1.09
PABPC4-203ENST00000372858 PLA2R1Q13018 1463 aa21.84■■□□□ 1.09
PABPC4-203ENST00000372858 COL17A1Q9UMD9 1497 aaPredicted RBP21.84■■□□□ 1.09
PABPC4-203ENST00000372858 TMF1P82094 1093 aa21.83■■□□□ 1.09
PABPC4-203ENST00000372858 SYCP2Q9BX26 1530 aa21.83■■□□□ 1.09
PABPC4-203ENST00000372858 INSRP06213 1382 aa21.83■■□□□ 1.08
PABPC4-203ENST00000372858 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
PABPC4-203ENST00000372858 DISP3Q9P2K9 1392 aa21.82■■□□□ 1.08
PABPC4-203ENST00000372858 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
PABPC4-203ENST00000372858 ERBINQ96RT1 1412 aa21.8■■□□□ 1.08
PABPC4-203ENST00000372858 UNC13BO14795 1591 aa21.8■■□□□ 1.08
PABPC4-203ENST00000372858 PRDM15P57071 1507 aaPredicted RBP21.79■■□□□ 1.08
PABPC4-203ENST00000372858 BLMP54132 1417 aaPredicted RBP21.79■■□□□ 1.08
PABPC4-203ENST00000372858 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
PABPC4-203ENST00000372858 MAST1Q9Y2H9 1570 aa21.77■■□□□ 1.08
PABPC4-203ENST00000372858 LAMC1P11047 1609 aa21.77■■□□□ 1.08
PABPC4-203ENST00000372858 SKAP1Q86WV1 359 aa21.76■■□□□ 1.07
PABPC4-203ENST00000372858 EIF2AK4Q9P2K8 1649 aaKnown RBP21.76■■□□□ 1.07
PABPC4-203ENST00000372858 ZMYM4Q5VZL5 1548 aa21.76■■□□□ 1.07
PABPC4-203ENST00000372858 IQGAP3Q86VI3 1631 aa21.74■■□□□ 1.07
PABPC4-203ENST00000372858 TTC37Q6PGP7 1564 aa21.73■■□□□ 1.07
PABPC4-203ENST00000372858 IL27Q8NEV9 243 aa21.73■■□□□ 1.07
PABPC4-203ENST00000372858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.72■■□□□ 1.072e-10■■□□□ 13.8
PABPC4-203ENST00000372858 C20orf194Q5TEA3 1177 aa21.72■■□□□ 1.07
PABPC4-203ENST00000372858 MYO5CQ9NQX4 1742 aa21.71■■□□□ 1.07
PABPC4-203ENST00000372858 ADAMTS8Q9UP79 889 aa21.71■■□□□ 1.07
PABPC4-203ENST00000372858 PLXNC1O60486 1568 aa21.71■■□□□ 1.07
PABPC4-203ENST00000372858 ATP10AO60312 1499 aa21.7■■□□□ 1.07
PABPC4-203ENST00000372858 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.06
PABPC4-203ENST00000372858 KNSTRNQ9Y448 316 aa21.7■■□□□ 1.06
PABPC4-203ENST00000372858 CENPQQ7L2Z9 268 aaPredicted RBP21.68■■□□□ 1.06
PABPC4-203ENST00000372858 KDM2BQ8NHM5 1336 aa21.68■■□□□ 1.06
PABPC4-203ENST00000372858 WDR43Q15061 677 aaKnown RBP eCLIP21.67■■□□□ 1.06
PABPC4-203ENST00000372858 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
PABPC4-203ENST00000372858 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
PABPC4-203ENST00000372858 CDCA8Q53HL2 280 aa21.64■■□□□ 1.05
PABPC4-203ENST00000372858 EFCAB2Q5VUJ9 269 aa21.64■■□□□ 1.05
PABPC4-203ENST00000372858 PPP2R1AP30153 589 aa21.63■■□□□ 1.05
PABPC4-203ENST00000372858 MAGI2Q86UL8 1455 aa21.63■■□□□ 1.05
PABPC4-203ENST00000372858 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.63■■□□□ 1.05
PABPC4-203ENST00000372858 RTN4Q9NQC3 1192 aaKnown RBP21.62■■□□□ 1.05
PABPC4-203ENST00000372858 SLC4A3P48751 1232 aa21.62■■□□□ 1.05
PABPC4-203ENST00000372858 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
PABPC4-203ENST00000372858 FAM161AQ3B820 660 aa21.62■■□□□ 1.05
PABPC4-203ENST00000372858 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
PABPC4-203ENST00000372858 NFKBIBQ15653 356 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms