RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 FRAT1Q92837 279 aaPredicted RBP24.24■■□□□ 1.47
MMP9-201ENST00000372330 ANKRD30AQ9BXX3 1397 aa24.24■■□□□ 1.47
MMP9-201ENST00000372330 NBPF8Q3BBV2 869 aa24.24■■□□□ 1.47
MMP9-201ENST00000372330 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
MMP9-201ENST00000372330 CDC42BPAQ5VT25 1732 aa24.21■■□□□ 1.47
MMP9-201ENST00000372330 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.46
MMP9-201ENST00000372330 KIAA1107Q9UPP5 1409 aa24.19■■□□□ 1.46
MMP9-201ENST00000372330 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
MMP9-201ENST00000372330 SHANK2Q9UPX8 1470 aa24.18■■□□□ 1.46
MMP9-201ENST00000372330 SPATA31E1Q6ZUB1 1445 aa24.16■■□□□ 1.46
MMP9-201ENST00000372330 C9orf84Q5VXU9 1444 aa24.14■■□□□ 1.45
MMP9-201ENST00000372330 RRP1P56182 461 aaKnown RBP24.12■■□□□ 1.45
MMP9-201ENST00000372330 PKD2Q13563 968 aa24.12■■□□□ 1.45
MMP9-201ENST00000372330 DAXXQ9UER7 740 aaPredicted RBP24.12■■□□□ 1.45
MMP9-201ENST00000372330 MBD5Q9P267 1494 aa24.11■■□□□ 1.45
MMP9-201ENST00000372330 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
MMP9-201ENST00000372330 POLR1AO95602 1720 aaPredicted RBP24.09■■□□□ 1.45
MMP9-201ENST00000372330 TSPY4P0CV99 314 aa24.09■■□□□ 1.45
MMP9-201ENST00000372330 TSPY10P0CW01 314 aa24.09■■□□□ 1.45
MMP9-201ENST00000372330 KIF7Q2M1P5 1343 aa24.08■■□□□ 1.45
MMP9-201ENST00000372330 EXOC6Q8TAG9 804 aa24.07■■□□□ 1.44
MMP9-201ENST00000372330 NUP155O75694 1391 aa24.06■■□□□ 1.44
MMP9-201ENST00000372330 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
MMP9-201ENST00000372330 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
MMP9-201ENST00000372330 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
MMP9-201ENST00000372330 PNISRQ8TF01 805 aaKnown RBP24.03■■□□□ 1.44
MMP9-201ENST00000372330 ABCC2Q92887 1545 aa24.03■■□□□ 1.44
MMP9-201ENST00000372330 KIF15Q9NS87 1388 aa24.02■■□□□ 1.44
MMP9-201ENST00000372330 DHX29Q7Z478 1369 aaKnown RBP24.01■■□□□ 1.43
MMP9-201ENST00000372330 ZMYND15Q9H091 742 aa24■■□□□ 1.43
MMP9-201ENST00000372330 DCAF11Q8TEB1 546 aa24■■□□□ 1.43
MMP9-201ENST00000372330 RCAN3Q9UKA8 241 aa23.99■■□□□ 1.43
MMP9-201ENST00000372330 CDC42BPBQ9Y5S2 1711 aa23.98■■□□□ 1.43
MMP9-201ENST00000372330 SAMD9LQ8IVG5 1584 aa23.98■■□□□ 1.43
MMP9-201ENST00000372330 PREX2Q70Z35 1606 aa23.98■■□□□ 1.43
MMP9-201ENST00000372330 CCDC141Q6ZP82 1450 aa23.98■■□□□ 1.43
MMP9-201ENST00000372330 USP47Q96K76 1375 aa23.98■■□□□ 1.43
MMP9-201ENST00000372330 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
MMP9-201ENST00000372330 UHRF1BP1Q6BDS2 1440 aa23.96■■□□□ 1.43
MMP9-201ENST00000372330 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.43
MMP9-201ENST00000372330 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.43
MMP9-201ENST00000372330 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
MMP9-201ENST00000372330 TMC1Q8TDI8 760 aa23.94■■□□□ 1.42
MMP9-201ENST00000372330 ARHGEF12Q9NZN5 1544 aa23.94■■□□□ 1.42
MMP9-201ENST00000372330 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
MMP9-201ENST00000372330 TTC37Q6PGP7 1564 aa23.93■■□□□ 1.42
MMP9-201ENST00000372330 RRP9O43818 475 aaKnown RBP23.93■■□□□ 1.42
MMP9-201ENST00000372330 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
MMP9-201ENST00000372330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.92■■□□□ 1.42
MMP9-201ENST00000372330 FRAT2O75474 233 aaPredicted RBP23.92■■□□□ 1.42
MMP9-201ENST00000372330 KDM5CP41229 1560 aa23.92■■□□□ 1.42
MMP9-201ENST00000372330 RALGAPBQ86X10 1494 aa23.91■■□□□ 1.42
MMP9-201ENST00000372330 L1TD1Q5T7N2 865 aaKnown RBP23.9■■□□□ 1.42
MMP9-201ENST00000372330 ZCCHC11Q5TAX3 1644 aaKnown RBP23.9■■□□□ 1.42
MMP9-201ENST00000372330 BCORL1Q5H9F3 1711 aa23.89■■□□□ 1.41
MMP9-201ENST00000372330 SLC4A3P48751 1232 aa23.88■■□□□ 1.41
MMP9-201ENST00000372330 HSP90AA2PQ14568 343 aaPredicted RBP23.88■■□□□ 1.41
MMP9-201ENST00000372330 UHRF1BP1LA0JNW5 1464 aa23.87■■□□□ 1.41
MMP9-201ENST00000372330 SYCP2Q9BX26 1530 aa23.86■■□□□ 1.41
MMP9-201ENST00000372330 ARHGAP5Q13017 1502 aa23.86■■□□□ 1.41
MMP9-201ENST00000372330 FAM135AQ9P2D6 1515 aa23.86■■□□□ 1.41
MMP9-201ENST00000372330 RRAGDQ9NQL2 400 aaPredicted RBP23.85■■□□□ 1.41
MMP9-201ENST00000372330 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
MMP9-201ENST00000372330 MYO5CQ9NQX4 1742 aa23.84■■□□□ 1.41
MMP9-201ENST00000372330 MAST1Q9Y2H9 1570 aa23.84■■□□□ 1.41
MMP9-201ENST00000372330 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
MMP9-201ENST00000372330 ROCK2O75116 1388 aaKnown RBP23.83■■□□□ 1.41
MMP9-201ENST00000372330 CARD11Q9BXL7 1154 aa23.83■■□□□ 1.41
MMP9-201ENST00000372330 FAM161AQ3B820 660 aa23.83■■□□□ 1.4
MMP9-201ENST00000372330 HSP90AA1P07900 732 aaKnown RBP23.82■■□□□ 1.4
MMP9-201ENST00000372330 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
MMP9-201ENST00000372330 POLR3GLQ9BT43 218 aa23.79■■□□□ 1.4
MMP9-201ENST00000372330 PLEKHH2Q8IVE3 1493 aa23.79■■□□□ 1.4
MMP9-201ENST00000372330 PNNQ9H307 717 aaKnown RBP23.78■■□□□ 1.4
MMP9-201ENST00000372330 UNC13BO14795 1591 aa23.77■■□□□ 1.4
MMP9-201ENST00000372330 CLCN1P35523 988 aa23.77■■□□□ 1.4
MMP9-201ENST00000372330 CCDC144AA2RUR9 1427 aa23.76■■□□□ 1.39
MMP9-201ENST00000372330 NAP1L5Q96NT1 182 aaPredicted RBP23.76■■□□□ 1.39
MMP9-201ENST00000372330 PLXNC1O60486 1568 aa23.75■■□□□ 1.39
MMP9-201ENST00000372330 RALBP1Q15311 655 aa23.75■■□□□ 1.39
MMP9-201ENST00000372330 CENPQQ7L2Z9 268 aaPredicted RBP23.75■■□□□ 1.39
MMP9-201ENST00000372330 MYBBP1AQ9BQG0 1328 aaKnown RBP23.74■■□□□ 1.39
MMP9-201ENST00000372330 KDM2BQ8NHM5 1336 aa23.74■■□□□ 1.39
MMP9-201ENST00000372330 ST20-MTHFSA0A0A6YYL1 179 aa23.73■■□□□ 1.39
MMP9-201ENST00000372330 CNGB1Q14028 1251 aaPredicted RBP23.73■■□□□ 1.39
MMP9-201ENST00000372330 C8orf34Q49A92 452 aa23.73■■□□□ 1.39
MMP9-201ENST00000372330 PLCH2O75038 1416 aa23.73■■□□□ 1.39
MMP9-201ENST00000372330 PLA2R1Q13018 1463 aa23.7■■□□□ 1.38
MMP9-201ENST00000372330 CRBNQ96SW2 442 aa23.7■■□□□ 1.38
MMP9-201ENST00000372330 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
MMP9-201ENST00000372330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.69■■□□□ 1.38
MMP9-201ENST00000372330 POGKQ9P215 609 aa23.69■■□□□ 1.38
MMP9-201ENST00000372330 IQGAP3Q86VI3 1631 aa23.69■■□□□ 1.38
MMP9-201ENST00000372330 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
MMP9-201ENST00000372330 SENP3-EIF4A1A0A087X0R7 540 aa23.68■■□□□ 1.38
MMP9-201ENST00000372330 EFCAB2Q5VUJ9 269 aa23.67■■□□□ 1.38
MMP9-201ENST00000372330 OSCARQ8IYS5 282 aa23.67■■□□□ 1.38
MMP9-201ENST00000372330 PODXL2Q9NZ53 605 aa23.66■■□□□ 1.38
MMP9-201ENST00000372330 TRPM1Q7Z4N2 1603 aa23.66■■□□□ 1.38
MMP9-201ENST00000372330 INSRP06213 1382 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms