RNA–Protein interactions for RNA: ENST00000371974.7

SURF1-201, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SURF1, Length 1,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-201ENST00000371974 CLTCQ00610 1675 aaKnown RBP38.78■■■■□ 3.8
SURF1-201ENST00000371974 NCOA1Q15788 1441 aa38.77■■■■□ 3.8
SURF1-201ENST00000371974 ADGRL2O95490 1459 aa38.74■■■■□ 3.79
SURF1-201ENST00000371974 ERBINQ96RT1 1412 aa38.74■■■■□ 3.79
SURF1-201ENST00000371974 WASHC2CQ9Y4E1 1318 aa38.74■■■■□ 3.79
SURF1-201ENST00000371974 FAM135AQ9P2D6 1515 aa38.73■■■■□ 3.79
SURF1-201ENST00000371974 LMTK3Q96Q04 1460 aa38.72■■■■□ 3.79
SURF1-201ENST00000371974 RNF17Q9BXT8 1623 aaKnown RBP38.7■■■■□ 3.79
SURF1-201ENST00000371974 KDM5DQ9BY66 1539 aa38.69■■■■□ 3.78
SURF1-201ENST00000371974 SETD1BQ9UPS6 1966 aaKnown RBP38.68■■■■□ 3.78
SURF1-201ENST00000371974 RRBP1Q9P2E9 1410 aaKnown RBP38.67■■■■□ 3.78
SURF1-201ENST00000371974 NPATQ14207 1427 aa38.66■■■■□ 3.78
SURF1-201ENST00000371974 PTPRKQ15262 1439 aa38.66■■■■□ 3.78
SURF1-201ENST00000371974 ITGAEP38570 1179 aa38.66■■■■□ 3.78
SURF1-201ENST00000371974 PREX1Q8TCU6 1659 aa38.64■■■■□ 3.78
SURF1-201ENST00000371974 UHRF1BP1Q6BDS2 1440 aa38.63■■■■□ 3.77
SURF1-201ENST00000371974 ROCK1Q13464 1354 aa38.6■■■■□ 3.77
SURF1-201ENST00000371974 MROH1Q8NDA8 1641 aa38.57■■■■□ 3.77
SURF1-201ENST00000371974 HSPA2P54652 639 aa38.57■■■■□ 3.76
SURF1-201ENST00000371974 ANKRD50Q9ULJ7 1429 aa38.55■■■■□ 3.76
SURF1-201ENST00000371974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.55■■■■□ 3.76
SURF1-201ENST00000371974 ABCC3O15438 1527 aa38.54■■■■□ 3.76
SURF1-201ENST00000371974 ZC3H13Q5T200 1668 aaKnown RBP38.54■■■■□ 3.76
SURF1-201ENST00000371974 KANK1Q14678 1352 aa38.53■■■■□ 3.76
SURF1-201ENST00000371974 PZPP20742 1482 aa38.52■■■■□ 3.76
SURF1-201ENST00000371974 PRDM15P57071 1507 aaPredicted RBP38.52■■■■□ 3.76
SURF1-201ENST00000371974 DEPDC5O75140 1603 aa38.49■■■■□ 3.75
SURF1-201ENST00000371974 FBXO31Q5XUX0 539 aaPredicted RBP38.48■■■■□ 3.75
SURF1-201ENST00000371974 CEP152O94986 1710 aa38.43■■■■□ 3.74
SURF1-201ENST00000371974 TNRQ92752 1358 aa38.41■■■■□ 3.74
SURF1-201ENST00000371974 CAMSAP1Q5T5Y3 1602 aa38.39■■■■□ 3.74
SURF1-201ENST00000371974 MYO3AQ8NEV4 1616 aa38.38■■■■□ 3.73
SURF1-201ENST00000371974 VWDEQ8N2E2 1590 aa38.36■■■■□ 3.73
SURF1-201ENST00000371974 ARHGAP31Q2M1Z3 1444 aa38.35■■■■□ 3.73
SURF1-201ENST00000371974 LMTK2Q8IWU2 1503 aa38.33■■■■□ 3.73
SURF1-201ENST00000371974 CEP170BQ9Y4F5 1589 aaPredicted RBP38.31■■■■□ 3.72
SURF1-201ENST00000371974 ZNF142P52746 1687 aaPredicted RBP38.3■■■■□ 3.72
SURF1-201ENST00000371974 A2ML1A8K2U0 1454 aa38.29■■■■□ 3.72
SURF1-201ENST00000371974 ERVK-7P63135 1459 aa38.29■■■■□ 3.72
SURF1-201ENST00000371974 SPATA31D1Q6ZQQ2 1576 aa38.29■■■■□ 3.72
SURF1-201ENST00000371974 NLRP1Q9C000 1473 aa38.26■■■■□ 3.72
SURF1-201ENST00000371974 UNC13BO14795 1591 aa38.26■■■■□ 3.72
SURF1-201ENST00000371974 DMRT2Q9Y5R5 561 aa38.23■■■■□ 3.71
SURF1-201ENST00000371974 CFAP65Q6ZU64 1925 aaKnown RBP38.22■■■■□ 3.71
SURF1-201ENST00000371974 NAIPQ13075 1403 aa38.21■■■■□ 3.71
SURF1-201ENST00000371974 EFCAB6Q5THR3 1501 aa38.19■■■■□ 3.7
SURF1-201ENST00000371974 NUP155O75694 1391 aa38.19■■■■□ 3.7
SURF1-201ENST00000371974 STRCQ7RTU9 1775 aa38.17■■■■□ 3.7
SURF1-201ENST00000371974 HFM1A2PYH4 1435 aa38.16■■■■□ 3.7
SURF1-201ENST00000371974 THEMISQ8N1K5 641 aaPredicted RBP38.15■■■■□ 3.7
SURF1-201ENST00000371974 PLA2R1Q13018 1463 aa38.14■■■■□ 3.7
SURF1-201ENST00000371974 TET3O43151 1660 aa38.14■■■■□ 3.7
SURF1-201ENST00000371974 GCC2Q8IWJ2 1684 aa38.14■■■■□ 3.7
SURF1-201ENST00000371974 RPRD2Q5VT52 1461 aaKnown RBP38.13■■■■□ 3.69
SURF1-201ENST00000371974 UGGT1Q9NYU2 1555 aa38.12■■■■□ 3.69
SURF1-201ENST00000371974 PKD2Q13563 968 aa38.12■■■■□ 3.69
SURF1-201ENST00000371974 IQGAP3Q86VI3 1631 aa38.11■■■■□ 3.69
SURF1-201ENST00000371974 NCKAP5LQ9HCH0 1330 aa38.08■■■■□ 3.69
SURF1-201ENST00000371974 PTPRTO14522 1441 aa38.06■■■■□ 3.68
SURF1-201ENST00000371974 NOS1P29475 1434 aa38.06■■■■□ 3.68
SURF1-201ENST00000371974 IDI1Q13907 227 aa38■■■■□ 3.67
SURF1-201ENST00000371974 ANKLE2Q86XL3 938 aa38■■■■□ 3.67
SURF1-201ENST00000371974 SLC52A1Q9NWF4 448 aa38■■■■□ 3.67
SURF1-201ENST00000371974 TRIM52Q96A61 297 aa37.99■■■■□ 3.67
SURF1-201ENST00000371974 STAG3Q9UJ98 1225 aa37.99■■■■□ 3.67
SURF1-201ENST00000371974 SYNMO15061 1565 aa37.98■■■■□ 3.67
SURF1-201ENST00000371974 E9PCH4 1651 aa37.96■■■■□ 3.67
SURF1-201ENST00000371974 UBR1Q8IWV7 1749 aa37.95■■■■□ 3.67
SURF1-201ENST00000371974 PIK3C2BO00750 1634 aa37.93■■■■□ 3.66
SURF1-201ENST00000371974 POLR1AO95602 1720 aaPredicted RBP37.87■■■■□ 3.65
SURF1-201ENST00000371974 KDM5AP29375 1690 aaKnown RBP37.85■■■■□ 3.65
SURF1-201ENST00000371974 SETD5Q9C0A6 1442 aa37.84■■■■□ 3.65
SURF1-201ENST00000371974 ACIN1Q9UKV3 1341 aaKnown RBP37.84■■■■□ 3.65
SURF1-201ENST00000371974 SLC4A1APQ9BWU0 796 aaKnown RBP37.83■■■■□ 3.65
SURF1-201ENST00000371974 NEURL4Q96JN8 1562 aa37.82■■■■□ 3.65
SURF1-201ENST00000371974 EID1Q9Y6B2 187 aa37.82■■■■□ 3.64
SURF1-201ENST00000371974 SLIT1O75093 1534 aa37.82■■■■□ 3.64
SURF1-201ENST00000371974 TMEM2Q9UHN6 1383 aa37.81■■■■□ 3.64
SURF1-201ENST00000371974 TXNDC2Q86VQ3 553 aa37.81■■■■□ 3.64
SURF1-201ENST00000371974 ARHGAP23Q9P227 1491 aa37.81■■■■□ 3.64
SURF1-201ENST00000371974 ADGRB3O60242 1522 aa37.81■■■■□ 3.64
SURF1-201ENST00000371974 MED14O60244 1454 aa37.8■■■■□ 3.64
SURF1-201ENST00000371974 NPHP4O75161 1426 aaPredicted RBP37.79■■■■□ 3.64
SURF1-201ENST00000371974 SCAF11Q99590 1463 aaKnown RBP37.77■■■■□ 3.64
SURF1-201ENST00000371974 LTKP29376 864 aa37.76■■■■□ 3.64
SURF1-201ENST00000371974 CHGAP10645 457 aaKnown RBP37.75■■■■□ 3.63
SURF1-201ENST00000371974 CERKQ8TCT0 537 aa37.73■■■■□ 3.63
SURF1-201ENST00000371974 SPHKAPQ2M3C7 1700 aa37.73■■■■□ 3.63
SURF1-201ENST00000371974 TMEM131LA2VDJ0 1609 aa37.69■■■■□ 3.62
SURF1-201ENST00000371974 ZNF335Q9H4Z2 1342 aaPredicted RBP37.69■■■■□ 3.62
SURF1-201ENST00000371974 IQGAP1P46940 1657 aa37.69■■■■□ 3.62
SURF1-201ENST00000371974 HDGFP51858 240 aaKnown RBP37.68■■■■□ 3.62
SURF1-201ENST00000371974 RAB3GAP2Q9H2M9 1393 aa37.68■■■■□ 3.62
SURF1-201ENST00000371974 MPHOSPH9Q99550 1183 aa37.67■■■■□ 3.62
SURF1-201ENST00000371974 LTBP4Q8N2S1 1624 aa37.65■■■■□ 3.62
SURF1-201ENST00000371974 TRPM2O94759 1503 aa37.63■■■■□ 3.61
SURF1-201ENST00000371974 MYO5BQ9ULV0 1848 aa37.61■■■■□ 3.61
SURF1-201ENST00000371974 RIMS2Q9UQ26 1411 aa37.61■■■■□ 3.61
SURF1-201ENST00000371974 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.59■■■■□ 3.61
SURF1-201ENST00000371974 PPP1R15AO75807 674 aaPredicted RBP37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms