RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 TRIM52Q96A61 297 aa26.18■■□□□ 1.78
VPS37B-202ENST00000371248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.18■■□□□ 1.78
VPS37B-202ENST00000371248 DEPDC5O75140 1603 aa26.16■■□□□ 1.78
VPS37B-202ENST00000371248 RNF17Q9BXT8 1623 aaKnown RBP26.15■■□□□ 1.78
VPS37B-202ENST00000371248 UNC13BO14795 1591 aa26.15■■□□□ 1.78
VPS37B-202ENST00000371248 MLECQ14165 292 aa26.15■■□□□ 1.78
VPS37B-202ENST00000371248 ACIN1Q9UKV3 1341 aaKnown RBP26.13■■□□□ 1.77
VPS37B-202ENST00000371248 MROH1Q8NDA8 1641 aa26.13■■□□□ 1.77
VPS37B-202ENST00000371248 NUP155O75694 1391 aa26.12■■□□□ 1.77
VPS37B-202ENST00000371248 PRDM15P57071 1507 aaPredicted RBP26.1■■□□□ 1.77
VPS37B-202ENST00000371248 KANK1Q14678 1352 aa26.08■■□□□ 1.77
VPS37B-202ENST00000371248 KDM5DQ9BY66 1539 aa26.06■■□□□ 1.76
VPS37B-202ENST00000371248 IQGAP3Q86VI3 1631 aa26.06■■□□□ 1.76
VPS37B-202ENST00000371248 VWDEQ8N2E2 1590 aa26.04■■□□□ 1.76
VPS37B-202ENST00000371248 CEP152O94986 1710 aa26.04■■□□□ 1.76
VPS37B-202ENST00000371248 FAM135AQ9P2D6 1515 aa26.04■■□□□ 1.76
VPS37B-202ENST00000371248 WASHC2CQ9Y4E1 1318 aa26.04■■□□□ 1.76
VPS37B-202ENST00000371248 PZPP20742 1482 aa26.03■■□□□ 1.76
VPS37B-202ENST00000371248 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
VPS37B-202ENST00000371248 MPHOSPH9Q99550 1183 aa26.02■■□□□ 1.76
VPS37B-202ENST00000371248 PPP6R1Q9UPN7 881 aa26.02■■□□□ 1.76
VPS37B-202ENST00000371248 ZC3H13Q5T200 1668 aaKnown RBP25.99■■□□□ 1.75
VPS37B-202ENST00000371248 ABCC3O15438 1527 aa25.99■■□□□ 1.75
VPS37B-202ENST00000371248 CLTCQ00610 1675 aaKnown RBP25.99■■□□□ 1.75
VPS37B-202ENST00000371248 ESF1Q9H501 851 aaKnown RBP25.99■■□□□ 1.75
VPS37B-202ENST00000371248 DHX57Q6P158 1386 aaKnown RBP25.96■■□□□ 1.75
VPS37B-202ENST00000371248 LMTK2Q8IWU2 1503 aa25.96■■□□□ 1.75
VPS37B-202ENST00000371248 TET3O43151 1660 aa25.96■■□□□ 1.75
VPS37B-202ENST00000371248 FER1L4A9Z1Z3 1794 aa25.96■■□□□ 1.75
VPS37B-202ENST00000371248 PKD2Q13563 968 aa25.94■■□□□ 1.74
VPS37B-202ENST00000371248 CAMSAP1Q5T5Y3 1602 aa25.94■■□□□ 1.74
VPS37B-202ENST00000371248 ADAMTSL3P82987 1691 aa25.93■■□□□ 1.74
VPS37B-202ENST00000371248 CFAP65Q6ZU64 1925 aaKnown RBP25.92■■□□□ 1.74
VPS37B-202ENST00000371248 E9PCH4 1651 aa25.91■■□□□ 1.74
VPS37B-202ENST00000371248 FOXD1Q16676 465 aa25.91■■□□□ 1.74
VPS37B-202ENST00000371248 MADDQ8WXG6 1647 aa25.91■■□□□ 1.74
VPS37B-202ENST00000371248 EFCAB6Q5THR3 1501 aa25.91■■□□□ 1.74
VPS37B-202ENST00000371248 CNTLNQ9NXG0 1405 aa25.89■■□□□ 1.74
VPS37B-202ENST00000371248 CCER1Q8TC90 406 aaPredicted RBP25.87■■□□□ 1.73
VPS37B-202ENST00000371248 MROH2AA6NES4 1674 aa25.87■■□□□ 1.73
VPS37B-202ENST00000371248 RIMS1Q86UR5 1692 aaKnown RBP25.87■■□□□ 1.73
VPS37B-202ENST00000371248 ZMYM3Q14202 1370 aa25.86■■□□□ 1.73
VPS37B-202ENST00000371248 NPATQ14207 1427 aa25.85■■□□□ 1.73
VPS37B-202ENST00000371248 ARHGAP31Q2M1Z3 1444 aa25.85■■□□□ 1.73
VPS37B-202ENST00000371248 RPRD2Q5VT52 1461 aaKnown RBP25.82■■□□□ 1.72
VPS37B-202ENST00000371248 C3P01024 1663 aa25.81■■□□□ 1.72
VPS37B-202ENST00000371248 CEBPAP49715 358 aaPredicted RBP25.79■■□□□ 1.72
VPS37B-202ENST00000371248 PLPPR3Q6T4P5 718 aa25.79■■□□□ 1.72
VPS37B-202ENST00000371248 SPHKAPQ2M3C7 1700 aa25.79■■□□□ 1.72
VPS37B-202ENST00000371248 FBXO31Q5XUX0 539 aaPredicted RBP25.78■■□□□ 1.72
VPS37B-202ENST00000371248 PREX1Q8TCU6 1659 aa25.78■■□□□ 1.72
VPS37B-202ENST00000371248 ANKRD30BQ9BXX2 1392 aa25.77■■□□□ 1.72
VPS37B-202ENST00000371248 KDM4FA0A1W2PPD8 638 aa25.76■■□□□ 1.71
VPS37B-202ENST00000371248 PLA2R1Q13018 1463 aa25.74■■□□□ 1.71
VPS37B-202ENST00000371248 PTPRTO14522 1441 aa25.74■■□□□ 1.71
VPS37B-202ENST00000371248 ERVK-7P63135 1459 aa25.73■■□□□ 1.71
VPS37B-202ENST00000371248 NOS1P29475 1434 aa25.72■■□□□ 1.71
VPS37B-202ENST00000371248 PTPRMP28827 1452 aa25.72■■□□□ 1.71
VPS37B-202ENST00000371248 SPATA31D1Q6ZQQ2 1576 aa25.71■■□□□ 1.71
VPS37B-202ENST00000371248 CLSPNQ9HAW4 1339 aa25.7■■□□□ 1.71
VPS37B-202ENST00000371248 TRPM2O94759 1503 aa25.7■■□□□ 1.7
VPS37B-202ENST00000371248 SYNMO15061 1565 aa25.69■■□□□ 1.7
VPS37B-202ENST00000371248 SIN3AQ96ST3 1273 aa25.69■■□□□ 1.7
VPS37B-202ENST00000371248 CCDC144AA2RUR9 1427 aa25.67■■□□□ 1.7
VPS37B-202ENST00000371248 UGGT1Q9NYU2 1555 aa25.66■■□□□ 1.7
VPS37B-202ENST00000371248 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
VPS37B-202ENST00000371248 CLTCL1P53675 1640 aa25.65■■□□□ 1.7
VPS37B-202ENST00000371248 TNRQ92752 1358 aa25.65■■□□□ 1.7
VPS37B-202ENST00000371248 SLC52A1Q9NWF4 448 aa25.62■■□□□ 1.69
VPS37B-202ENST00000371248 PIK3C2BO00750 1634 aa25.62■■□□□ 1.69
VPS37B-202ENST00000371248 IDI1Q13907 227 aa25.61■■□□□ 1.69
VPS37B-202ENST00000371248 SETD1BQ9UPS6 1966 aaKnown RBP25.61■■□□□ 1.69
VPS37B-202ENST00000371248 KIF1BO60333 1816 aa25.6■■□□□ 1.69
VPS37B-202ENST00000371248 PELP1Q8IZL8 1130 aaKnown RBP25.59■■□□□ 1.69
VPS37B-202ENST00000371248 CHGAP10645 457 aaKnown RBP25.56■■□□□ 1.68
VPS37B-202ENST00000371248 MYO3AQ8NEV4 1616 aa25.54■■□□□ 1.68
VPS37B-202ENST00000371248 NLRP1Q9C000 1473 aa25.53■■□□□ 1.68
VPS37B-202ENST00000371248 MYO5BQ9ULV0 1848 aa25.52■■□□□ 1.68
VPS37B-202ENST00000371248 STAG3Q9UJ98 1225 aa25.52■■□□□ 1.68
VPS37B-202ENST00000371248 RGL3Q3MIN7 710 aa25.51■■□□□ 1.67
VPS37B-202ENST00000371248 TMEM131LA2VDJ0 1609 aa25.5■■□□□ 1.67
VPS37B-202ENST00000371248 SPATA31E1Q6ZUB1 1445 aa25.49■■□□□ 1.67
VPS37B-202ENST00000371248 ADGRB3O60242 1522 aa25.48■■□□□ 1.67
VPS37B-202ENST00000371248 UBR1Q8IWV7 1749 aa25.47■■□□□ 1.67
VPS37B-202ENST00000371248 TONSLQ96HA7 1378 aa25.47■■□□□ 1.67
VPS37B-202ENST00000371248 ZNF326Q5BKZ1 582 aaKnown RBP25.46■■□□□ 1.67
VPS37B-202ENST00000371248 CEP170BQ9Y4F5 1589 aaPredicted RBP25.46■■□□□ 1.67
VPS37B-202ENST00000371248 A2ML1A8K2U0 1454 aa25.46■■□□□ 1.67
VPS37B-202ENST00000371248 UHRF1BP1Q6BDS2 1440 aa25.45■■□□□ 1.66
VPS37B-202ENST00000371248 KDM5AP29375 1690 aaKnown RBP25.45■■□□□ 1.66
VPS37B-202ENST00000371248 NEURL4Q96JN8 1562 aa25.45■■□□□ 1.66
VPS37B-202ENST00000371248 ZNF142P52746 1687 aaPredicted RBP25.44■■□□□ 1.66
VPS37B-202ENST00000371248 L3MBTL2Q969R5 705 aa25.43■■□□□ 1.66
VPS37B-202ENST00000371248 TIMELESSQ9UNS1 1208 aa25.41■■□□□ 1.66
VPS37B-202ENST00000371248 DCAF11Q8TEB1 546 aa25.4■■□□□ 1.66
VPS37B-202ENST00000371248 THEMISQ8N1K5 641 aaPredicted RBP25.39■■□□□ 1.65
VPS37B-202ENST00000371248 KDM2AQ9Y2K7 1162 aa25.37■■□□□ 1.65
VPS37B-202ENST00000371248 PPLO60437 1756 aa25.37■■□□□ 1.65
VPS37B-202ENST00000371248 RPGRIP1LQ68CZ1 1315 aa25.37■■□□□ 1.65
VPS37B-202ENST00000371248 IFT172Q9UG01 1749 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms