RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 TRIM44Q96DX7 344 aaPredicted RBP20.55■□□□□ 0.88
PHACTR3-204ENST00000371015 BECN1Q14457 450 aa20.54■□□□□ 0.88
PHACTR3-204ENST00000371015 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
PHACTR3-204ENST00000371015 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
PHACTR3-204ENST00000371015 CCDC18Q5T9S5 1454 aa20.53■□□□□ 0.88
PHACTR3-204ENST00000371015 UACAQ9BZF9 1416 aa20.53■□□□□ 0.88
PHACTR3-204ENST00000371015 IQGAP2Q13576 1575 aa20.53■□□□□ 0.88
PHACTR3-204ENST00000371015 FBLN2P98095 1184 aa20.53■□□□□ 0.88
PHACTR3-204ENST00000371015 HFM1A2PYH4 1435 aa20.52■□□□□ 0.88
PHACTR3-204ENST00000371015 DMTNQ08495 405 aa20.52■□□□□ 0.87
PHACTR3-204ENST00000371015 UGGT2Q9NYU1 1516 aa20.51■□□□□ 0.87
PHACTR3-204ENST00000371015 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.51■□□□□ 0.87
PHACTR3-204ENST00000371015 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
PHACTR3-204ENST00000371015 KIF20AO95235 890 aa20.5■□□□□ 0.87
PHACTR3-204ENST00000371015 RCAN3Q9UKA8 241 aa20.49■□□□□ 0.87
PHACTR3-204ENST00000371015 OFD1O75665 1012 aa20.48■□□□□ 0.87
PHACTR3-204ENST00000371015 PDE3BQ13370 1112 aa20.48■□□□□ 0.87
PHACTR3-204ENST00000371015 KDM5BQ9UGL1 1544 aa20.47■□□□□ 0.87
PHACTR3-204ENST00000371015 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
PHACTR3-204ENST00000371015 PTPN23Q9H3S7 1636 aa20.47■□□□□ 0.87
PHACTR3-204ENST00000371015 TAF3Q5VWG9 929 aa20.47■□□□□ 0.87
PHACTR3-204ENST00000371015 MTUS2Q5JR59 1369 aa20.47■□□□□ 0.87
PHACTR3-204ENST00000371015 C8orf34Q49A92 452 aa20.46■□□□□ 0.87
PHACTR3-204ENST00000371015 PANK2Q9BZ23 570 aa20.45■□□□□ 0.86
PHACTR3-204ENST00000371015 CHMP4BQ9H444 224 aaKnown RBP20.45■□□□□ 0.86
PHACTR3-204ENST00000371015 ARXQ96QS3 562 aa20.44■□□□□ 0.86
PHACTR3-204ENST00000371015 CENPQQ7L2Z9 268 aaPredicted RBP20.44■□□□□ 0.86
PHACTR3-204ENST00000371015 GTPBP4Q9BZE4 634 aaKnown RBP20.44■□□□□ 0.86
PHACTR3-204ENST00000371015 RIPK4P57078 832 aa20.43■□□□□ 0.86
PHACTR3-204ENST00000371015 GRPEL1Q9HAV7 217 aa20.42■□□□□ 0.86
PHACTR3-204ENST00000371015 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
PHACTR3-204ENST00000371015 ERBB4Q15303 1308 aa20.42■□□□□ 0.86
PHACTR3-204ENST00000371015 POLR1AO95602 1720 aaPredicted RBP20.41■□□□□ 0.86
PHACTR3-204ENST00000371015 NAIPQ13075 1403 aa20.4■□□□□ 0.86
PHACTR3-204ENST00000371015 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
PHACTR3-204ENST00000371015 MYOM3Q5VTT5 1437 aa20.4■□□□□ 0.86
PHACTR3-204ENST00000371015 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
PHACTR3-204ENST00000371015 ARID4BQ4LE39 1312 aaPredicted RBP20.4■□□□□ 0.86
PHACTR3-204ENST00000371015 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
PHACTR3-204ENST00000371015 VGFO15240 615 aaPredicted RBP20.39■□□□□ 0.85
PHACTR3-204ENST00000371015 LETM1O95202 739 aaPredicted RBP20.39■□□□□ 0.85
PHACTR3-204ENST00000371015 PPP4R3BQ5MIZ7 849 aa20.39■□□□□ 0.85
PHACTR3-204ENST00000371015 ZHX1Q9UKY1 873 aaPredicted RBP20.39■□□□□ 0.85
PHACTR3-204ENST00000371015 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
PHACTR3-204ENST00000371015 DYNC1I1O14576 645 aa20.38■□□□□ 0.85
PHACTR3-204ENST00000371015 ANTXR1Q9H6X2 564 aa20.37■□□□□ 0.85
PHACTR3-204ENST00000371015 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
PHACTR3-204ENST00000371015 SUPT6HQ7KZ85 1726 aaKnown RBP20.37■□□□□ 0.85
PHACTR3-204ENST00000371015 JPH4Q96JJ6 628 aa20.36■□□□□ 0.85
PHACTR3-204ENST00000371015 FAM13BQ9NYF5 915 aa20.36■□□□□ 0.85
PHACTR3-204ENST00000371015 ZSCAN30Q86W11 494 aa20.36■□□□□ 0.85
PHACTR3-204ENST00000371015 EHBP1L1Q8N3D4 1523 aa20.36■□□□□ 0.85
PHACTR3-204ENST00000371015 MCM4P33991 863 aa20.35■□□□□ 0.85
PHACTR3-204ENST00000371015 FTSJ3Q8IY81 847 aaKnown RBP20.35■□□□□ 0.85
PHACTR3-204ENST00000371015 TMEM51Q9NW97 253 aa20.35■□□□□ 0.85
PHACTR3-204ENST00000371015 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
PHACTR3-204ENST00000371015 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.85
PHACTR3-204ENST00000371015 CCDC94Q9BW85 323 aaPredicted RBP20.33■□□□□ 0.85
PHACTR3-204ENST00000371015 KIAA0556O60303 1618 aa20.33■□□□□ 0.85
PHACTR3-204ENST00000371015 ZSCAN20P17040 1043 aaPredicted RBP20.33■□□□□ 0.85
PHACTR3-204ENST00000371015 KLHL34Q8N239 644 aa20.32■□□□□ 0.84
PHACTR3-204ENST00000371015 PAXIP1Q6ZW49 1069 aaPredicted RBP20.32■□□□□ 0.84
PHACTR3-204ENST00000371015 CCDC173Q0VFZ6 552 aa20.31■□□□□ 0.84
PHACTR3-204ENST00000371015 LRRIQ1Q96JM4 1722 aa20.3■□□□□ 0.84
PHACTR3-204ENST00000371015 TRAK2O60296 914 aa20.3■□□□□ 0.84
PHACTR3-204ENST00000371015 HS1BP3Q53T59 392 aa20.3■□□□□ 0.84
PHACTR3-204ENST00000371015 MSNP26038 577 aaKnown RBP20.29■□□□□ 0.84
PHACTR3-204ENST00000371015 ANP32BQ92688 251 aaKnown RBP20.29■□□□□ 0.84
PHACTR3-204ENST00000371015 DDX11L8A8MPP1 907 aa20.28■□□□□ 0.84
PHACTR3-204ENST00000371015 PPP1R9BQ96SB3 815 aa20.28■□□□□ 0.84
PHACTR3-204ENST00000371015 VIRMAQ69YN4 1812 aaKnown RBP20.28■□□□□ 0.84
PHACTR3-204ENST00000371015 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
PHACTR3-204ENST00000371015 HECW1Q76N89 1606 aa20.26■□□□□ 0.83
PHACTR3-204ENST00000371015 DHX29Q7Z478 1369 aaKnown RBP20.26■□□□□ 0.83
PHACTR3-204ENST00000371015 GCC2Q8IWJ2 1684 aa20.26■□□□□ 0.83
PHACTR3-204ENST00000371015 CSPP1Q1MSJ5 1256 aa20.26■□□□□ 0.83
PHACTR3-204ENST00000371015 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
PHACTR3-204ENST00000371015 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
PHACTR3-204ENST00000371015 PTMSP20962 102 aa20.25■□□□□ 0.83
PHACTR3-204ENST00000371015 KIF7Q2M1P5 1343 aa20.25■□□□□ 0.83
PHACTR3-204ENST00000371015 TEX2Q8IWB9 1127 aa20.25■□□□□ 0.83
PHACTR3-204ENST00000371015 GLI2P10070 1586 aa20.24■□□□□ 0.83
PHACTR3-204ENST00000371015 BRD2P25440 801 aaKnown RBP20.24■□□□□ 0.83
PHACTR3-204ENST00000371015 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
PHACTR3-204ENST00000371015 DISP1Q96F81 1524 aa20.24■□□□□ 0.83
PHACTR3-204ENST00000371015 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
PHACTR3-204ENST00000371015 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
PHACTR3-204ENST00000371015 ABCC2Q92887 1545 aa20.23■□□□□ 0.83
PHACTR3-204ENST00000371015 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
PHACTR3-204ENST00000371015 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
PHACTR3-204ENST00000371015 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
PHACTR3-204ENST00000371015 ZNF500O60304 480 aaPredicted RBP20.22■□□□□ 0.83
PHACTR3-204ENST00000371015 USP19O94966 1318 aa20.22■□□□□ 0.83
PHACTR3-204ENST00000371015 UQCRHLA0A096LP55 91 aa20.21■□□□□ 0.83
PHACTR3-204ENST00000371015 UQCRHP07919 91 aa20.21■□□□□ 0.83
PHACTR3-204ENST00000371015 CHRM1P11229 460 aaPredicted RBP20.21■□□□□ 0.83
PHACTR3-204ENST00000371015 GZF1Q9H116 711 aaPredicted RBP20.21■□□□□ 0.83
PHACTR3-204ENST00000371015 CHMP5Q9NZZ3 219 aa20.2■□□□□ 0.82
PHACTR3-204ENST00000371015 INSRP06213 1382 aa20.2■□□□□ 0.82
PHACTR3-204ENST00000371015 SPATA31E1Q6ZUB1 1445 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms