RNA–Protein interactions for RNA: ENST00000370269.3

SLF2-202, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLF2, Length 3,712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-202ENST00000370269 PREX2Q70Z35 1606 aa9.45□□□□□ -0.9
SLF2-202ENST00000370269 TRAPPC8Q9Y2L5 1435 aa9.45□□□□□ -0.9
SLF2-202ENST00000370269 CCDC144AA2RUR9 1427 aa9.44□□□□□ -0.9
SLF2-202ENST00000370269 BCORL1Q5H9F3 1711 aa9.44□□□□□ -0.9
SLF2-202ENST00000370269 FAM135AQ9P2D6 1515 aa9.44□□□□□ -0.9
SLF2-202ENST00000370269 SHANK2Q9UPX8 1470 aa9.44□□□□□ -0.9
SLF2-202ENST00000370269 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
SLF2-202ENST00000370269 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
SLF2-202ENST00000370269 SHROOM2Q13796 1616 aa9.43□□□□□ -0.9
SLF2-202ENST00000370269 ZCCHC11Q5TAX3 1644 aaKnown RBP9.43□□□□□ -0.9
SLF2-202ENST00000370269 KIF3BO15066 747 aa9.42□□□□□ -0.9
SLF2-202ENST00000370269 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
SLF2-202ENST00000370269 ARHGEF5Q12774 1597 aa9.42□□□□□ -0.9
SLF2-202ENST00000370269 MYO5CQ9NQX4 1742 aa9.41□□□□□ -0.9
SLF2-202ENST00000370269 PLCH2O75038 1416 aa9.41□□□□□ -0.9
SLF2-202ENST00000370269 CC2D1BQ5T0F9 858 aaKnown RBP9.41□□□□□ -0.9
SLF2-202ENST00000370269 TMC1Q8TDI8 760 aa9.4□□□□□ -0.9
SLF2-202ENST00000370269 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.9
SLF2-202ENST00000370269 PLA2R1Q13018 1463 aa9.4□□□□□ -0.91
SLF2-202ENST00000370269 SCAPERQ9BY12 1400 aa9.39□□□□□ -0.91
SLF2-202ENST00000370269 DHX29Q7Z478 1369 aaKnown RBP9.39□□□□□ -0.91
SLF2-202ENST00000370269 KDM5CP41229 1560 aa9.38□□□□□ -0.91
SLF2-202ENST00000370269 CLASP1Q7Z460 1538 aa9.38□□□□□ -0.91
SLF2-202ENST00000370269 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
SLF2-202ENST00000370269 NPM1P06748 294 aaKnown RBP eCLIP9.38□□□□□ -0.91
SLF2-202ENST00000370269 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
SLF2-202ENST00000370269 RALGAPBQ86X10 1494 aa9.37□□□□□ -0.91
SLF2-202ENST00000370269 GGT6Q6P531 493 aa9.37□□□□□ -0.91
SLF2-202ENST00000370269 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
SLF2-202ENST00000370269 A2MP01023 1474 aa9.36□□□□□ -0.91
SLF2-202ENST00000370269 NUTM2DQ5VT03 806 aaPredicted RBP9.35□□□□□ -0.91
SLF2-202ENST00000370269 UHRF1BP1Q6BDS2 1440 aa9.35□□□□□ -0.91
SLF2-202ENST00000370269 PRAG1Q86YV5 1406 aa9.35□□□□□ -0.91
SLF2-202ENST00000370269 KDM5DQ9BY66 1539 aa9.35□□□□□ -0.91
SLF2-202ENST00000370269 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
SLF2-202ENST00000370269 B4GALNT3Q6L9W6 998 aa9.35□□□□□ -0.91
SLF2-202ENST00000370269 FANCAO15360 1455 aa9.35□□□□□ -0.91
SLF2-202ENST00000370269 PANK3Q9H999 370 aa9.34□□□□□ -0.91
SLF2-202ENST00000370269 DISP3Q9P2K9 1392 aa9.34□□□□□ -0.91
SLF2-202ENST00000370269 DUOX2Q9NRD8 1548 aa9.34□□□□□ -0.91
SLF2-202ENST00000370269 ASXL2Q76L83 1435 aa9.34□□□□□ -0.91
SLF2-202ENST00000370269 WDR7Q9Y4E6 1490 aa9.33□□□□□ -0.92
SLF2-202ENST00000370269 RTN4Q9NQC3 1192 aaKnown RBP9.33□□□□□ -0.92
SLF2-202ENST00000370269 ABCC1P33527 1531 aa9.33□□□□□ -0.92
SLF2-202ENST00000370269 RAPGEF3O95398 923 aa9.33□□□□□ -0.92
SLF2-202ENST00000370269 ADGRL1O94910 1474 aa9.32□□□□□ -0.92
SLF2-202ENST00000370269 ZBED9Q6R2W3 1325 aa9.32□□□□□ -0.92
SLF2-202ENST00000370269 PNISRQ8TF01 805 aaKnown RBP9.32□□□□□ -0.92
SLF2-202ENST00000370269 MSH5O43196 834 aa9.32□□□□□ -0.92
SLF2-202ENST00000370269 CFAP70Q5T0N1 1121 aa9.31□□□□□ -0.92
SLF2-202ENST00000370269 TESK2Q96S53 571 aa9.31□□□□□ -0.92
SLF2-202ENST00000370269 UHRF1BP1LA0JNW5 1464 aa9.31□□□□□ -0.92
SLF2-202ENST00000370269 CYB5RLQ6IPT4 315 aa9.31□□□□□ -0.92
SLF2-202ENST00000370269 POLR1AO95602 1720 aaPredicted RBP9.31□□□□□ -0.92
SLF2-202ENST00000370269 UNC13BO14795 1591 aa9.3□□□□□ -0.92
SLF2-202ENST00000370269 UGGT1Q9NYU2 1555 aa9.3□□□□□ -0.92
SLF2-202ENST00000370269 ERBINQ96RT1 1412 aa9.3□□□□□ -0.92
SLF2-202ENST00000370269 TMF1P82094 1093 aa9.3□□□□□ -0.92
SLF2-202ENST00000370269 MAST1Q9Y2H9 1570 aa9.3□□□□□ -0.92
SLF2-202ENST00000370269 DEKP35659 375 aaKnown RBP9.3□□□□□ -0.92
SLF2-202ENST00000370269 CCDC136Q96JN2 1154 aa9.3□□□□□ -0.92
SLF2-202ENST00000370269 PLXNC1O60486 1568 aa9.3□□□□□ -0.92
SLF2-202ENST00000370269 IQGAP3Q86VI3 1631 aa9.29□□□□□ -0.92
SLF2-202ENST00000370269 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
SLF2-202ENST00000370269 TRPM1Q7Z4N2 1603 aa9.29□□□□□ -0.92
SLF2-202ENST00000370269 MYBBP1AQ9BQG0 1328 aaKnown RBP9.29□□□□□ -0.92
SLF2-202ENST00000370269 KANK1Q14678 1352 aa9.29□□□□□ -0.92
SLF2-202ENST00000370269 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
SLF2-202ENST00000370269 ADGRF5Q8IZF2 1346 aa9.28□□□□□ -0.92
SLF2-202ENST00000370269 ZFYVE16Q7Z3T8 1539 aa9.28□□□□□ -0.92
SLF2-202ENST00000370269 KTN1Q86UP2 1357 aaKnown RBP9.28□□□□□ -0.92
SLF2-202ENST00000370269 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
SLF2-202ENST00000370269 E9PCH4 1651 aa9.28□□□□□ -0.92
SLF2-202ENST00000370269 ARID4BQ4LE39 1312 aaPredicted RBP9.27□□□□□ -0.92
SLF2-202ENST00000370269 ATP10AO60312 1499 aa9.27□□□□□ -0.93
SLF2-202ENST00000370269 ATP7AQ04656 1500 aa9.27□□□□□ -0.93
SLF2-202ENST00000370269 TMEM132EQ6IEE7 984 aa9.27□□□□□ -0.93
SLF2-202ENST00000370269 RALBP1Q15311 655 aa9.27□□□□□ -0.93
SLF2-202ENST00000370269 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
SLF2-202ENST00000370269 ANP32AP39687 249 aaKnown RBP9.26□□□□□ -0.93
SLF2-202ENST00000370269 SAFB2Q14151 953 aaKnown RBP eCLIP9.26□□□□□ -0.93
SLF2-202ENST00000370269 TRAK1Q9UPV9 953 aa9.26□□□□□ -0.93
SLF2-202ENST00000370269 CD109Q6YHK3 1445 aa9.26□□□□□ -0.93
SLF2-202ENST00000370269 NUDCQ9Y266 331 aa9.26□□□□□ -0.93
SLF2-202ENST00000370269 KNSTRNQ9Y448 316 aa9.25□□□□□ -0.93
SLF2-202ENST00000370269 WASHC2CQ9Y4E1 1318 aa9.25□□□□□ -0.93
SLF2-202ENST00000370269 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
SLF2-202ENST00000370269 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
SLF2-202ENST00000370269 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.24□□□□□ -0.93
SLF2-202ENST00000370269 CLTCL1P53675 1640 aa9.24□□□□□ -0.93
SLF2-202ENST00000370269 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
SLF2-202ENST00000370269 MAGI2Q86UL8 1455 aa9.23□□□□□ -0.93
SLF2-202ENST00000370269 RTEL1-TNFRSF6BF6WH68 1400 aa9.23□□□□□ -0.93
SLF2-202ENST00000370269 GPRASP1Q5JY77 1395 aa9.23□□□□□ -0.93
SLF2-202ENST00000370269 COL17A1Q9UMD9 1497 aaPredicted RBP9.23□□□□□ -0.93
SLF2-202ENST00000370269 PLIN1O60240 522 aa9.22□□□□□ -0.93
SLF2-202ENST00000370269 CCDC146Q8IYE0 955 aa9.22□□□□□ -0.93
SLF2-202ENST00000370269 BRD4O60885 1362 aaPredicted RBP9.22□□□□□ -0.93
SLF2-202ENST00000370269 ADAMTS8Q9UP79 889 aa9.22□□□□□ -0.93
SLF2-202ENST00000370269 PRDM15P57071 1507 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms