RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 SAFB2Q14151 953 aaKnown RBP eCLIP22.36■■□□□ 1.17
CHRNA4-201ENST00000370263 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
CHRNA4-201ENST00000370263 ZNF771Q7L3S4 317 aaPredicted RBP22.35■■□□□ 1.17
CHRNA4-201ENST00000370263 ST20-MTHFSA0A0A6YYL1 179 aa22.33■■□□□ 1.17
CHRNA4-201ENST00000370263 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
CHRNA4-201ENST00000370263 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
CHRNA4-201ENST00000370263 MRE11P49959 708 aa22.31■■□□□ 1.16
CHRNA4-201ENST00000370263 IL27Q8NEV9 243 aa22.31■■□□□ 1.16
CHRNA4-201ENST00000370263 BRPF3Q9ULD4 1205 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 ATP6V1DQ9Y5K8 247 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 PANK3Q9H999 370 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 STK31Q9BXU1 1019 aa22.29■■□□□ 1.16
CHRNA4-201ENST00000370263 ANKRD45Q5TZF3 282 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 GPATCH3Q96I76 525 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 SOX12O15370 315 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 CCDC34Q96HJ3 373 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 HSP90B1P14625 803 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-201ENST00000370263 MAP7D2Q96T17 732 aa22.27■■□□□ 1.16
CHRNA4-201ENST00000370263 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.15
CHRNA4-201ENST00000370263 BCL2L13Q9BXK5 485 aa22.26■■□□□ 1.15
CHRNA4-201ENST00000370263 USP47Q96K76 1375 aa22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 MTERF4Q7Z6M4 381 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 NOC3LQ8WTT2 800 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 PKNOX2Q96KN3 472 aa22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 RRP7AQ9Y3A4 280 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 LMOD2Q6P5Q4 547 aa22.24■■□□□ 1.15
CHRNA4-201ENST00000370263 GOLGA6L19H0YKK7 550 aa22.24■■□□□ 1.15
CHRNA4-201ENST00000370263 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
CHRNA4-201ENST00000370263 STK26Q9P289 416 aa22.23■■□□□ 1.15
CHRNA4-201ENST00000370263 PAK3O75914 559 aaPredicted RBP22.23■■□□□ 1.15
CHRNA4-201ENST00000370263 TPM2P07951 284 aa22.22■■□□□ 1.15
CHRNA4-201ENST00000370263 LMOD3Q0VAK6 560 aa22.22■■□□□ 1.15
CHRNA4-201ENST00000370263 KIF3AQ9Y496 699 aa22.22■■□□□ 1.15
CHRNA4-201ENST00000370263 SLC4A10Q6U841 1118 aa22.21■■□□□ 1.15
CHRNA4-201ENST00000370263 SPAG9O60271 1321 aaKnown RBP22.21■■□□□ 1.15
CHRNA4-201ENST00000370263 HDAC5Q9UQL6 1122 aa22.21■■□□□ 1.15
CHRNA4-201ENST00000370263 CCDC18Q5T9S5 1454 aa22.2■■□□□ 1.14
CHRNA4-201ENST00000370263 NGEFQ8N5V2 710 aa22.2■■□□□ 1.14
CHRNA4-201ENST00000370263 CNTLNQ9NXG0 1405 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 BECN2A8MW95 431 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 TPM3P06753 285 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 NUCB2P80303 420 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 FOXD4L6Q3SYB3 417 aaPredicted RBP22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 FOXD4L3Q6VB84 417 aaPredicted RBP22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 CCDC7Q96M83 1385 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 GPS2Q13227 327 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 SETQ01105 290 aaPredicted RBP22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 DDX19BQ9UMR2 479 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 C22orf23Q9BZE7 217 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 R3HCC1Q9Y3T6 440 aaKnown RBP22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 APAF1O14727 1248 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 ZNF592Q92610 1267 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 TERF2IPQ9NYB0 399 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 REC8O95072 547 aa22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 NASPP49321 788 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 SF3A1Q15459 793 aaKnown RBP22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 FRAT2O75474 233 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 PRKCSHP14314 528 aaPredicted RBP22.15■■□□□ 1.14
CHRNA4-201ENST00000370263 TRAK2O60296 914 aa22.15■■□□□ 1.14
CHRNA4-201ENST00000370263 TEX35Q5T0J7 233 aa22.15■■□□□ 1.14
CHRNA4-201ENST00000370263 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
CHRNA4-201ENST00000370263 RILPL2Q969X0 211 aa22.14■■□□□ 1.13
CHRNA4-201ENST00000370263 AAMPQ13685 434 aa22.14■■□□□ 1.13
CHRNA4-201ENST00000370263 A0A0U1RQG5 324 aaPredicted RBP22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 CCDC39Q9UFE4 941 aa22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 DZIP1LQ8IYY4 767 aaKnown RBP22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 KIF7Q2M1P5 1343 aa22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 H3BQV1 296 aa22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 MCTP1Q6DN14 999 aa22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 CCAR2Q8N163 923 aaKnown RBP22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 DIAPH3Q9NSV4 1193 aa22.1■■□□□ 1.13
CHRNA4-201ENST00000370263 TOP2AP11388 1531 aaKnown RBP22.1■■□□□ 1.13
CHRNA4-201ENST00000370263 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
CHRNA4-201ENST00000370263 BACH2Q9BYV9 841 aa22.08■■□□□ 1.12
CHRNA4-201ENST00000370263 GGT6Q6P531 493 aa22.07■■□□□ 1.12
CHRNA4-201ENST00000370263 FAM184AQ8NB25 1140 aa22.07■■□□□ 1.12
CHRNA4-201ENST00000370263 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
CHRNA4-201ENST00000370263 CHMP4CQ96CF2 233 aa22.06■■□□□ 1.12
CHRNA4-201ENST00000370263 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
CHRNA4-201ENST00000370263 GORABQ5T7V8 394 aa22.05■■□□□ 1.12
CHRNA4-201ENST00000370263 CREBRFQ8IUR6 639 aa22.05■■□□□ 1.12
CHRNA4-201ENST00000370263 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
CHRNA4-201ENST00000370263 RSPH4AQ5TD94 716 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 CCDC173Q0VFZ6 552 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 CARMIL2Q6F5E8 1435 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 NPHP1O15259 732 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 BRD4O60885 1362 aaPredicted RBP22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 WIZO95785 1651 aa22.03■■□□□ 1.12
CHRNA4-201ENST00000370263 INTS3Q68E01 1043 aaKnown RBP22.03■■□□□ 1.12
CHRNA4-201ENST00000370263 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 IFT57Q9NWB7 429 aa22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 HOMER1Q86YM7 354 aa22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 ISY1Q9ULR0 285 aaKnown RBP22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 EFCAB2Q5VUJ9 269 aa22.01■■□□□ 1.11
CHRNA4-201ENST00000370263 ARGLU1Q9NWB6 273 aaPredicted RBP22.01■■□□□ 1.11
CHRNA4-201ENST00000370263 RASSF8Q8NHQ8 419 aa22■■□□□ 1.11
CHRNA4-201ENST00000370263 RRP9O43818 475 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms