RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 SAFB2Q14151 953 aaKnown RBP eCLIP22.36■■□□□ 1.17
CHRNA4-201ENST00000370263 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
CHRNA4-201ENST00000370263 ZNF771Q7L3S4 317 aaPredicted RBP22.35■■□□□ 1.17
CHRNA4-201ENST00000370263 ST20-MTHFSA0A0A6YYL1 179 aa22.33■■□□□ 1.17
CHRNA4-201ENST00000370263 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
CHRNA4-201ENST00000370263 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
CHRNA4-201ENST00000370263 MRE11P49959 708 aa22.31■■□□□ 1.16
CHRNA4-201ENST00000370263 IL27Q8NEV9 243 aa22.31■■□□□ 1.16
CHRNA4-201ENST00000370263 BRPF3Q9ULD4 1205 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 ATP6V1DQ9Y5K8 247 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 PANK3Q9H999 370 aa22.3■■□□□ 1.16
CHRNA4-201ENST00000370263 STK31Q9BXU1 1019 aa22.29■■□□□ 1.16
CHRNA4-201ENST00000370263 ANKRD45Q5TZF3 282 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 GPATCH3Q96I76 525 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 SOX12O15370 315 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 CCDC34Q96HJ3 373 aa22.28■■□□□ 1.16
CHRNA4-201ENST00000370263 HSP90B1P14625 803 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-201ENST00000370263 MAP7D2Q96T17 732 aa22.27■■□□□ 1.16
CHRNA4-201ENST00000370263 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.15
CHRNA4-201ENST00000370263 BCL2L13Q9BXK5 485 aa22.26■■□□□ 1.15
CHRNA4-201ENST00000370263 USP47Q96K76 1375 aa22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 MTERF4Q7Z6M4 381 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 NOC3LQ8WTT2 800 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 PKNOX2Q96KN3 472 aa22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 RRP7AQ9Y3A4 280 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-201ENST00000370263 LMOD2Q6P5Q4 547 aa22.24■■□□□ 1.15
CHRNA4-201ENST00000370263 GOLGA6L19H0YKK7 550 aa22.24■■□□□ 1.15
CHRNA4-201ENST00000370263 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
CHRNA4-201ENST00000370263 STK26Q9P289 416 aa22.23■■□□□ 1.15
CHRNA4-201ENST00000370263 PAK3O75914 559 aaPredicted RBP22.23■■□□□ 1.15
CHRNA4-201ENST00000370263 TPM2P07951 284 aa22.22■■□□□ 1.15
CHRNA4-201ENST00000370263 LMOD3Q0VAK6 560 aa22.22■■□□□ 1.15
CHRNA4-201ENST00000370263 KIF3AQ9Y496 699 aa22.22■■□□□ 1.15
CHRNA4-201ENST00000370263 SLC4A10Q6U841 1118 aa22.21■■□□□ 1.15
CHRNA4-201ENST00000370263 SPAG9O60271 1321 aaKnown RBP22.21■■□□□ 1.15
CHRNA4-201ENST00000370263 HDAC5Q9UQL6 1122 aa22.21■■□□□ 1.15
CHRNA4-201ENST00000370263 CCDC18Q5T9S5 1454 aa22.2■■□□□ 1.14
CHRNA4-201ENST00000370263 NGEFQ8N5V2 710 aa22.2■■□□□ 1.14
CHRNA4-201ENST00000370263 CNTLNQ9NXG0 1405 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 BECN2A8MW95 431 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 TPM3P06753 285 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 NUCB2P80303 420 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 FOXD4L6Q3SYB3 417 aaPredicted RBP22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 FOXD4L3Q6VB84 417 aaPredicted RBP22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 CCDC7Q96M83 1385 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 GPS2Q13227 327 aa22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 SETQ01105 290 aaPredicted RBP22.19■■□□□ 1.14
CHRNA4-201ENST00000370263 DDX19BQ9UMR2 479 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 C22orf23Q9BZE7 217 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 R3HCC1Q9Y3T6 440 aaKnown RBP22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 APAF1O14727 1248 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 ZNF592Q92610 1267 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 TERF2IPQ9NYB0 399 aa22.18■■□□□ 1.14
CHRNA4-201ENST00000370263 REC8O95072 547 aa22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 NASPP49321 788 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 SF3A1Q15459 793 aaKnown RBP22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 FRAT2O75474 233 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-201ENST00000370263 PRKCSHP14314 528 aaPredicted RBP22.15■■□□□ 1.14
CHRNA4-201ENST00000370263 TRAK2O60296 914 aa22.15■■□□□ 1.14
CHRNA4-201ENST00000370263 TEX35Q5T0J7 233 aa22.15■■□□□ 1.14
CHRNA4-201ENST00000370263 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
CHRNA4-201ENST00000370263 RILPL2Q969X0 211 aa22.14■■□□□ 1.13
CHRNA4-201ENST00000370263 AAMPQ13685 434 aa22.14■■□□□ 1.13
CHRNA4-201ENST00000370263 A0A0U1RQG5 324 aaPredicted RBP22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 CCDC39Q9UFE4 941 aa22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 DZIP1LQ8IYY4 767 aaKnown RBP22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 KIF7Q2M1P5 1343 aa22.13■■□□□ 1.13
CHRNA4-201ENST00000370263 H3BQV1 296 aa22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 MCTP1Q6DN14 999 aa22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 CCAR2Q8N163 923 aaKnown RBP22.12■■□□□ 1.13
CHRNA4-201ENST00000370263 DIAPH3Q9NSV4 1193 aa22.1■■□□□ 1.13
CHRNA4-201ENST00000370263 TOP2AP11388 1531 aaKnown RBP22.1■■□□□ 1.13
CHRNA4-201ENST00000370263 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
CHRNA4-201ENST00000370263 BACH2Q9BYV9 841 aa22.08■■□□□ 1.12
CHRNA4-201ENST00000370263 GGT6Q6P531 493 aa22.07■■□□□ 1.12
CHRNA4-201ENST00000370263 FAM184AQ8NB25 1140 aa22.07■■□□□ 1.12
CHRNA4-201ENST00000370263 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
CHRNA4-201ENST00000370263 CHMP4CQ96CF2 233 aa22.06■■□□□ 1.12
CHRNA4-201ENST00000370263 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
CHRNA4-201ENST00000370263 GORABQ5T7V8 394 aa22.05■■□□□ 1.12
CHRNA4-201ENST00000370263 CREBRFQ8IUR6 639 aa22.05■■□□□ 1.12
CHRNA4-201ENST00000370263 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
CHRNA4-201ENST00000370263 RSPH4AQ5TD94 716 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 CCDC173Q0VFZ6 552 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 CARMIL2Q6F5E8 1435 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 NPHP1O15259 732 aa22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 BRD4O60885 1362 aaPredicted RBP22.04■■□□□ 1.12
CHRNA4-201ENST00000370263 WIZO95785 1651 aa22.03■■□□□ 1.12
CHRNA4-201ENST00000370263 INTS3Q68E01 1043 aaKnown RBP22.03■■□□□ 1.12
CHRNA4-201ENST00000370263 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 IFT57Q9NWB7 429 aa22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 HOMER1Q86YM7 354 aa22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 ISY1Q9ULR0 285 aaKnown RBP22.02■■□□□ 1.12
CHRNA4-201ENST00000370263 EFCAB2Q5VUJ9 269 aa22.01■■□□□ 1.11
CHRNA4-201ENST00000370263 ARGLU1Q9NWB6 273 aaPredicted RBP22.01■■□□□ 1.11
CHRNA4-201ENST00000370263 RASSF8Q8NHQ8 419 aa22■■□□□ 1.11
CHRNA4-201ENST00000370263 RRP9O43818 475 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms