RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 SLC24A1O60721 1099 aa15.55■□□□□ 0.08
RAP1A-202ENST00000369709 CHAF1AQ13111 956 aaPredicted RBP15.55■□□□□ 0.08
RAP1A-202ENST00000369709 NASPP49321 788 aaPredicted RBP15.55■□□□□ 0.08
RAP1A-202ENST00000369709 PRDM10Q9NQV6 1147 aa15.54■□□□□ 0.08
RAP1A-202ENST00000369709 RRP7AQ9Y3A4 280 aaKnown RBP15.54■□□□□ 0.08
RAP1A-202ENST00000369709 MCM4P33991 863 aa15.54■□□□□ 0.08
RAP1A-202ENST00000369709 KIAA2012Q0VF49 1180 aa15.54■□□□□ 0.08
RAP1A-202ENST00000369709 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
RAP1A-202ENST00000369709 C22orf23Q9BZE7 217 aa15.53■□□□□ 0.08
RAP1A-202ENST00000369709 SKOR2Q2VWA4 1001 aaPredicted RBP15.53■□□□□ 0.08
RAP1A-202ENST00000369709 ADAMTS8Q9UP79 889 aa15.53■□□□□ 0.08
RAP1A-202ENST00000369709 APAF1O14727 1248 aa15.53■□□□□ 0.08
RAP1A-202ENST00000369709 XRCC6P12956 609 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAP1A-202ENST00000369709 ERICH3Q5RHP9 1530 aa15.52■□□□□ 0.08
RAP1A-202ENST00000369709 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
RAP1A-202ENST00000369709 CDCA8Q53HL2 280 aa15.52■□□□□ 0.07
RAP1A-202ENST00000369709 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
RAP1A-202ENST00000369709 BCAR3O75815 825 aa15.51■□□□□ 0.07
RAP1A-202ENST00000369709 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
RAP1A-202ENST00000369709 CGNL1Q0VF96 1302 aa15.51■□□□□ 0.07
RAP1A-202ENST00000369709 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
RAP1A-202ENST00000369709 NUP155O75694 1391 aa15.5■□□□□ 0.07
RAP1A-202ENST00000369709 CLCN1P35523 988 aa15.49■□□□□ 0.07
RAP1A-202ENST00000369709 NCOA1Q15788 1441 aa15.49■□□□□ 0.07
RAP1A-202ENST00000369709 CASC1Q6TDU7 716 aa15.49■□□□□ 0.07
RAP1A-202ENST00000369709 HFM1A2PYH4 1435 aa15.49■□□□□ 0.07
RAP1A-202ENST00000369709 CFAP53Q96M91 514 aa15.48■□□□□ 0.07
RAP1A-202ENST00000369709 PDCL3Q9H2J4 239 aa15.48■□□□□ 0.07
RAP1A-202ENST00000369709 UQCRHLA0A096LP55 91 aa15.47■□□□□ 0.07
RAP1A-202ENST00000369709 UQCRHP07919 91 aa15.47■□□□□ 0.07
RAP1A-202ENST00000369709 ZHX1Q9UKY1 873 aaPredicted RBP15.47■□□□□ 0.07
RAP1A-202ENST00000369709 APBB1O00213 710 aa15.46■□□□□ 0.07
RAP1A-202ENST00000369709 C8orf34Q49A92 452 aa15.46■□□□□ 0.07
RAP1A-202ENST00000369709 IGF1RP08069 1367 aa15.46■□□□□ 0.07
RAP1A-202ENST00000369709 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.07
RAP1A-202ENST00000369709 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.07
RAP1A-202ENST00000369709 E9PSI1 815 aa15.46■□□□□ 0.07
RAP1A-202ENST00000369709 MAP7D2Q96T17 732 aa15.46■□□□□ 0.07
RAP1A-202ENST00000369709 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
RAP1A-202ENST00000369709 ZNF771Q7L3S4 317 aaPredicted RBP15.45■□□□□ 0.06
RAP1A-202ENST00000369709 FOXD4L6Q3SYB3 417 aaPredicted RBP15.45■□□□□ 0.06
RAP1A-202ENST00000369709 FOXD4L3Q6VB84 417 aaPredicted RBP15.45■□□□□ 0.06
RAP1A-202ENST00000369709 CCDC173Q0VFZ6 552 aa15.45■□□□□ 0.06
RAP1A-202ENST00000369709 SMC4Q9NTJ3 1288 aa15.45■□□□□ 0.06
RAP1A-202ENST00000369709 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
RAP1A-202ENST00000369709 NOL8Q76FK4 1167 aaKnown RBP15.44■□□□□ 0.06
RAP1A-202ENST00000369709 TBC1D2Q9BYX2 928 aa15.43■□□□□ 0.06
RAP1A-202ENST00000369709 DRC7Q8IY82 874 aa15.43■□□□□ 0.06
RAP1A-202ENST00000369709 CSPP1Q1MSJ5 1256 aa15.42■□□□□ 0.06
RAP1A-202ENST00000369709 NAIPQ13075 1403 aa15.42■□□□□ 0.06
RAP1A-202ENST00000369709 CAVIN1Q6NZI2 390 aaKnown RBP15.42■□□□□ 0.06
RAP1A-202ENST00000369709 MORC1Q86VD1 984 aa15.42■□□□□ 0.06
RAP1A-202ENST00000369709 RNF214Q8ND24 703 aa15.42■□□□□ 0.06
RAP1A-202ENST00000369709 MPNDQ8N594 471 aa15.41■□□□□ 0.06
RAP1A-202ENST00000369709 NCOA2Q15596 1464 aa15.41■□□□□ 0.06
RAP1A-202ENST00000369709 MAP3K1Q13233 1512 aa15.41■□□□□ 0.06
RAP1A-202ENST00000369709 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
RAP1A-202ENST00000369709 BCL11BQ9C0K0 894 aaPredicted RBP15.4■□□□□ 0.06
RAP1A-202ENST00000369709 ZSCAN30Q86W11 494 aa15.38■□□□□ 0.05
RAP1A-202ENST00000369709 CFTRP13569 1480 aa15.38■□□□□ 0.05
RAP1A-202ENST00000369709 XPCQ01831 940 aaPredicted RBP15.38■□□□□ 0.05
RAP1A-202ENST00000369709 U2AF1L5P0DN76 240 aaPredicted RBP15.37■□□□□ 0.05
RAP1A-202ENST00000369709 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.056e-8■■■□□ 17.4
RAP1A-202ENST00000369709 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
RAP1A-202ENST00000369709 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
RAP1A-202ENST00000369709 ANKRD45Q5TZF3 282 aa15.37■□□□□ 0.05
RAP1A-202ENST00000369709 MTERF4Q7Z6M4 381 aaKnown RBP15.37■□□□□ 0.05
RAP1A-202ENST00000369709 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
RAP1A-202ENST00000369709 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
RAP1A-202ENST00000369709 IGHDP01880 384 aa15.36■□□□□ 0.05
RAP1A-202ENST00000369709 SEC24BO95487 1268 aa15.35■□□□□ 0.05
RAP1A-202ENST00000369709 SYAP1Q96A49 352 aaPredicted RBP15.35■□□□□ 0.05
RAP1A-202ENST00000369709 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
RAP1A-202ENST00000369709 CASKIN1Q8WXD9 1431 aa15.35■□□□□ 0.05
RAP1A-202ENST00000369709 EIF3AQ14152 1382 aaKnown RBP15.35■□□□□ 0.05
RAP1A-202ENST00000369709 TNNT3P45378 269 aaPredicted RBP15.34■□□□□ 0.05
RAP1A-202ENST00000369709 ZKSCAN2Q63HK3 967 aa15.34■□□□□ 0.05
RAP1A-202ENST00000369709 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAP1A-202ENST00000369709 CBX1P83916 185 aa15.33■□□□□ 0.04
RAP1A-202ENST00000369709 CCDC39Q9UFE4 941 aa15.33■□□□□ 0.04
RAP1A-202ENST00000369709 ANKRD30AQ9BXX3 1397 aa15.33■□□□□ 0.04
RAP1A-202ENST00000369709 ISY1Q9ULR0 285 aaKnown RBP15.33■□□□□ 0.04
RAP1A-202ENST00000369709 CUX1P39880 1505 aa15.32■□□□□ 0.04
RAP1A-202ENST00000369709 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
RAP1A-202ENST00000369709 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
RAP1A-202ENST00000369709 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
RAP1A-202ENST00000369709 PPP2R1AP30153 589 aa15.31■□□□□ 0.04
RAP1A-202ENST00000369709 FYCO1Q9BQS8 1478 aa15.31■□□□□ 0.04
RAP1A-202ENST00000369709 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
RAP1A-202ENST00000369709 TNPO1Q92973 898 aaKnown RBP15.3■□□□□ 0.04
RAP1A-202ENST00000369709 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
RAP1A-202ENST00000369709 PCF11O94913 1555 aaKnown RBP15.29■□□□□ 0.04
RAP1A-202ENST00000369709 NBPF1Q3BBV0 1214 aa15.29■□□□□ 0.04
RAP1A-202ENST00000369709 ST18O60284 1047 aa15.29■□□□□ 0.04
RAP1A-202ENST00000369709 TDRD9Q8NDG6 1382 aaKnown RBP15.29■□□□□ 0.04
RAP1A-202ENST00000369709 PTPN23Q9H3S7 1636 aa15.28■□□□□ 0.04
RAP1A-202ENST00000369709 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
RAP1A-202ENST00000369709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.28■□□□□ 0.042e-11■□□□□ 8.8
RAP1A-202ENST00000369709 CHMP4BQ9H444 224 aaKnown RBP15.27■□□□□ 0.04
RAP1A-202ENST00000369709 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms