RNA–Protein interactions for RNA: ENST00000369643.5

FAM3A-204, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-204ENST00000369643 ARID4BQ4LE39 1312 aaPredicted RBP27.76■■■□□ 2.04
FAM3A-204ENST00000369643 CEP152O94986 1710 aa27.76■■■□□ 2.03
FAM3A-204ENST00000369643 ADAMTSL3P82987 1691 aa27.75■■■□□ 2.03
FAM3A-204ENST00000369643 SETD5Q9C0A6 1442 aa27.75■■■□□ 2.03
FAM3A-204ENST00000369643 PRDM15P57071 1507 aaPredicted RBP27.74■■■□□ 2.03
FAM3A-204ENST00000369643 MADDQ8WXG6 1647 aa27.74■■■□□ 2.03
FAM3A-204ENST00000369643 RAB3GAP2Q9H2M9 1393 aa27.74■■■□□ 2.03
FAM3A-204ENST00000369643 FER1L4A9Z1Z3 1794 aa27.72■■■□□ 2.03
FAM3A-204ENST00000369643 VWDEQ8N2E2 1590 aa27.71■■■□□ 2.03
FAM3A-204ENST00000369643 GGT6Q6P531 493 aa27.71■■■□□ 2.03
FAM3A-204ENST00000369643 CLTCQ00610 1675 aaKnown RBP27.7■■■□□ 2.03
FAM3A-204ENST00000369643 RIMS1Q86UR5 1692 aaKnown RBP27.67■■■□□ 2.02
FAM3A-204ENST00000369643 ABCC3O15438 1527 aa27.66■■■□□ 2.02
FAM3A-204ENST00000369643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.66■■■□□ 2.02
FAM3A-204ENST00000369643 IQGAP3Q86VI3 1631 aa27.64■■■□□ 2.02
FAM3A-204ENST00000369643 KDM4FA0A1W2PPD8 638 aa27.63■■■□□ 2.01
FAM3A-204ENST00000369643 PZPP20742 1482 aa27.62■■■□□ 2.01
FAM3A-204ENST00000369643 KDM5DQ9BY66 1539 aa27.62■■■□□ 2.01
FAM3A-204ENST00000369643 CAMSAP1Q5T5Y3 1602 aa27.6■■■□□ 2.01
FAM3A-204ENST00000369643 FAM135AQ9P2D6 1515 aa27.59■■■□□ 2.01
FAM3A-204ENST00000369643 ZC3H13Q5T200 1668 aaKnown RBP27.59■■■□□ 2.01
FAM3A-204ENST00000369643 C3P01024 1663 aa27.57■■■□□ 2
FAM3A-204ENST00000369643 NUP155O75694 1391 aa27.57■■■□□ 2
FAM3A-204ENST00000369643 CFAP65Q6ZU64 1925 aaKnown RBP27.56■■■□□ 2
FAM3A-204ENST00000369643 LMTK2Q8IWU2 1503 aa27.55■■■□□ 2
FAM3A-204ENST00000369643 E9PCH4 1651 aa27.55■■■□□ 2
FAM3A-204ENST00000369643 MROH2AA6NES4 1674 aa27.54■■■□□ 2
FAM3A-204ENST00000369643 TET3O43151 1660 aa27.54■■■□□ 2
FAM3A-204ENST00000369643 EFCAB6Q5THR3 1501 aa27.52■■■□□ 2
FAM3A-204ENST00000369643 TRIM52Q96A61 297 aa27.51■■■□□ 2
FAM3A-204ENST00000369643 WASHC2CQ9Y4E1 1318 aa27.51■■□□□ 1.99
FAM3A-204ENST00000369643 CEBPAP49715 358 aaPredicted RBP27.49■■□□□ 1.99
FAM3A-204ENST00000369643 PTPRMP28827 1452 aa27.47■■□□□ 1.99
FAM3A-204ENST00000369643 NPATQ14207 1427 aa27.47■■□□□ 1.99
FAM3A-204ENST00000369643 KANK1Q14678 1352 aa27.46■■□□□ 1.99
FAM3A-204ENST00000369643 ZMYM3Q14202 1370 aa27.45■■□□□ 1.99
FAM3A-204ENST00000369643 FOXD1Q16676 465 aa27.45■■□□□ 1.98
FAM3A-204ENST00000369643 PLPPR3Q6T4P5 718 aa27.45■■□□□ 1.98
FAM3A-204ENST00000369643 PREX1Q8TCU6 1659 aa27.44■■□□□ 1.98
FAM3A-204ENST00000369643 FBXO31Q5XUX0 539 aaPredicted RBP27.43■■□□□ 1.98
FAM3A-204ENST00000369643 CNTLNQ9NXG0 1405 aa27.43■■□□□ 1.98
FAM3A-204ENST00000369643 HRCP23327 699 aa27.42■■□□□ 1.98
FAM3A-204ENST00000369643 PPP6R1Q9UPN7 881 aa27.41■■□□□ 1.98
FAM3A-204ENST00000369643 MPHOSPH9Q99550 1183 aa27.41■■□□□ 1.98
FAM3A-204ENST00000369643 SYNMO15061 1565 aa27.39■■□□□ 1.98
FAM3A-204ENST00000369643 ARHGAP31Q2M1Z3 1444 aa27.39■■□□□ 1.97
FAM3A-204ENST00000369643 SLC4A1APQ9BWU0 796 aaKnown RBP27.38■■□□□ 1.97
FAM3A-204ENST00000369643 PKD2Q13563 968 aa27.37■■□□□ 1.97
FAM3A-204ENST00000369643 UGGT1Q9NYU2 1555 aa27.37■■□□□ 1.97
FAM3A-204ENST00000369643 ERVK-7P63135 1459 aa27.37■■□□□ 1.97
FAM3A-204ENST00000369643 DHX57Q6P158 1386 aaKnown RBP27.37■■□□□ 1.97
FAM3A-204ENST00000369643 SPHKAPQ2M3C7 1700 aa27.36■■□□□ 1.97
FAM3A-204ENST00000369643 PLA2R1Q13018 1463 aa27.36■■□□□ 1.97
FAM3A-204ENST00000369643 SPATA31D1Q6ZQQ2 1576 aa27.36■■□□□ 1.97
FAM3A-204ENST00000369643 ESF1Q9H501 851 aaKnown RBP27.36■■□□□ 1.97
FAM3A-204ENST00000369643 NOS1P29475 1434 aa27.32■■□□□ 1.96
FAM3A-204ENST00000369643 RPRD2Q5VT52 1461 aaKnown RBP27.3■■□□□ 1.96
FAM3A-204ENST00000369643 CLTCL1P53675 1640 aa27.28■■□□□ 1.96
FAM3A-204ENST00000369643 MYO3AQ8NEV4 1616 aa27.28■■□□□ 1.96
FAM3A-204ENST00000369643 PTPRTO14522 1441 aa27.27■■□□□ 1.96
FAM3A-204ENST00000369643 PIK3C2BO00750 1634 aa27.27■■□□□ 1.96
FAM3A-204ENST00000369643 TRPM2O94759 1503 aa27.25■■□□□ 1.95
FAM3A-204ENST00000369643 MYO5BQ9ULV0 1848 aa27.23■■□□□ 1.95
FAM3A-204ENST00000369643 TNRQ92752 1358 aa27.22■■□□□ 1.95
FAM3A-204ENST00000369643 ANKRD30BQ9BXX2 1392 aa27.2■■□□□ 1.95
FAM3A-204ENST00000369643 ZNF142P52746 1687 aaPredicted RBP27.17■■□□□ 1.94
FAM3A-204ENST00000369643 SETD1BQ9UPS6 1966 aaKnown RBP27.17■■□□□ 1.94
FAM3A-204ENST00000369643 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
FAM3A-204ENST00000369643 UBR1Q8IWV7 1749 aa27.15■■□□□ 1.94
FAM3A-204ENST00000369643 CEP170BQ9Y4F5 1589 aaPredicted RBP27.14■■□□□ 1.94
FAM3A-204ENST00000369643 IDI1Q13907 227 aa27.14■■□□□ 1.94
FAM3A-204ENST00000369643 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
FAM3A-204ENST00000369643 LMTK3Q96Q04 1460 aa27.1■■□□□ 1.93
FAM3A-204ENST00000369643 SIN3AQ96ST3 1273 aa27.1■■□□□ 1.93
FAM3A-204ENST00000369643 KIF1BO60333 1816 aa27.09■■□□□ 1.93
FAM3A-204ENST00000369643 ADGRB3O60242 1522 aa27.09■■□□□ 1.93
FAM3A-204ENST00000369643 NLRP1Q9C000 1473 aa27.08■■□□□ 1.93
FAM3A-204ENST00000369643 A2ML1A8K2U0 1454 aa27.07■■□□□ 1.92
FAM3A-204ENST00000369643 CCDC144AA2RUR9 1427 aa27.05■■□□□ 1.92
FAM3A-204ENST00000369643 UHRF1BP1Q6BDS2 1440 aa27.05■■□□□ 1.92
FAM3A-204ENST00000369643 SPATA31E1Q6ZUB1 1445 aa27.02■■□□□ 1.92
FAM3A-204ENST00000369643 KDM5AP29375 1690 aaKnown RBP27.02■■□□□ 1.92
FAM3A-204ENST00000369643 SLC52A1Q9NWF4 448 aa27■■□□□ 1.91
FAM3A-204ENST00000369643 HSPA2P54652 639 aa26.99■■□□□ 1.91
FAM3A-204ENST00000369643 IFT172Q9UG01 1749 aa26.98■■□□□ 1.91
FAM3A-204ENST00000369643 CHGAP10645 457 aaKnown RBP26.97■■□□□ 1.91
FAM3A-204ENST00000369643 CCER1Q8TC90 406 aaPredicted RBP26.97■■□□□ 1.91
FAM3A-204ENST00000369643 PPLO60437 1756 aa26.95■■□□□ 1.9
FAM3A-204ENST00000369643 NEXMIFQ5QGS0 1516 aa26.95■■□□□ 1.9
FAM3A-204ENST00000369643 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
FAM3A-204ENST00000369643 ARHGAP23Q9P227 1491 aa26.92■■□□□ 1.9
FAM3A-204ENST00000369643 STRCQ7RTU9 1775 aa26.92■■□□□ 1.9
FAM3A-204ENST00000369643 ZFYVE9O95405 1425 aa26.92■■□□□ 1.9
FAM3A-204ENST00000369643 SLIT1O75093 1534 aa26.91■■□□□ 1.9
FAM3A-204ENST00000369643 NEURL4Q96JN8 1562 aa26.91■■□□□ 1.9
FAM3A-204ENST00000369643 RGL3Q3MIN7 710 aa26.9■■□□□ 1.9
FAM3A-204ENST00000369643 NUTM2DQ5VT03 806 aaPredicted RBP26.9■■□□□ 1.9
FAM3A-204ENST00000369643 TMEM2Q9UHN6 1383 aa26.88■■□□□ 1.89
FAM3A-204ENST00000369643 POLR1AO95602 1720 aaPredicted RBP26.88■■□□□ 1.89
FAM3A-204ENST00000369643 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms