RNA–Protein interactions for RNA: ENST00000369643.5

FAM3A-204, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-204ENST00000369643 NISCHQ9Y2I1 1504 aa44.13■■■■■ 4.65
FAM3A-204ENST00000369643 CCDC180Q9P1Z9 1646 aa38.95■■■■□ 3.83
FAM3A-204ENST00000369643 ABCC9O60706 1549 aa37.68■■■■□ 3.62
FAM3A-204ENST00000369643 ZCCHC6Q5VYS8 1495 aaKnown RBP36.92■■■■□ 3.5
FAM3A-204ENST00000369643 DCAF8L2P0C7V8 631 aa36.57■■■■□ 3.44
FAM3A-204ENST00000369643 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
FAM3A-204ENST00000369643 NACADO15069 1562 aa36.41■■■■□ 3.42
FAM3A-204ENST00000369643 RB1CC1Q8TDY2 1594 aa36.33■■■■□ 3.41
FAM3A-204ENST00000369643 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
FAM3A-204ENST00000369643 UNC13AQ9UPW8 1703 aa35.84■■■■□ 3.33
FAM3A-204ENST00000369643 SCRIBQ14160 1630 aa35.74■■■■□ 3.31
FAM3A-204ENST00000369643 BICRAQ9NZM4 1560 aa35.45■■■■□ 3.27
FAM3A-204ENST00000369643 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
FAM3A-204ENST00000369643 PABPN1Q86U42 306 aaKnown RBP eCLIP35.31■■■■□ 3.24
FAM3A-204ENST00000369643 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
FAM3A-204ENST00000369643 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
FAM3A-204ENST00000369643 DNAJC5BQ9UF47 199 aa34.19■■■■□ 3.06
FAM3A-204ENST00000369643 SMARCA4P51532 1647 aa34.18■■■■□ 3.06
FAM3A-204ENST00000369643 MROH2BQ7Z745 1585 aa34.13■■■■□ 3.05
FAM3A-204ENST00000369643 CC2D2AQ9P2K1 1620 aa34.12■■■■□ 3.05
FAM3A-204ENST00000369643 BAZ1AQ9NRL2 1556 aaPredicted RBP34.09■■■■□ 3.05
FAM3A-204ENST00000369643 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
FAM3A-204ENST00000369643 WIZO95785 1651 aa33.84■■■■□ 3.01
FAM3A-204ENST00000369643 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
FAM3A-204ENST00000369643 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
FAM3A-204ENST00000369643 SMARCA2P51531 1590 aa33.67■■■□□ 2.98
FAM3A-204ENST00000369643 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
FAM3A-204ENST00000369643 HMGXB3Q12766 1538 aa33.52■■■□□ 2.96
FAM3A-204ENST00000369643 BAZ1BQ9UIG0 1483 aaKnown RBP33.5■■■□□ 2.95
FAM3A-204ENST00000369643 SUPT5HO00267 1087 aaKnown RBP33.4■■■□□ 2.94
FAM3A-204ENST00000369643 TOP2AP11388 1531 aaKnown RBP33.37■■■□□ 2.93
FAM3A-204ENST00000369643 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.87
FAM3A-204ENST00000369643 NESP48681 1621 aa32.87■■■□□ 2.85
FAM3A-204ENST00000369643 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
FAM3A-204ENST00000369643 LAMC3Q9Y6N6 1575 aa32.64■■■□□ 2.82
FAM3A-204ENST00000369643 CFTRP13569 1480 aa32.62■■■□□ 2.81
FAM3A-204ENST00000369643 PRDM2Q13029 1718 aa32.53■■■□□ 2.8
FAM3A-204ENST00000369643 KIF21AQ7Z4S6 1674 aa32.5■■■□□ 2.79
FAM3A-204ENST00000369643 FANCD2Q9BXW9 1451 aa32.34■■■□□ 2.77
FAM3A-204ENST00000369643 PDS5BQ9NTI5 1447 aa32.3■■■□□ 2.76
FAM3A-204ENST00000369643 ERCC6Q03468 1493 aa32.28■■■□□ 2.76
FAM3A-204ENST00000369643 CEP164Q9UPV0 1460 aa32.21■■■□□ 2.75
FAM3A-204ENST00000369643 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
FAM3A-204ENST00000369643 ABCC8Q09428 1581 aa32.1■■■□□ 2.73
FAM3A-204ENST00000369643 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
FAM3A-204ENST00000369643 MRC2Q9UBG0 1479 aa32.07■■■□□ 2.72
FAM3A-204ENST00000369643 WDR62O43379 1518 aa31.99■■■□□ 2.71
FAM3A-204ENST00000369643 CUX1P39880 1505 aa31.97■■■□□ 2.71
FAM3A-204ENST00000369643 TOPBP1Q92547 1522 aa31.93■■■□□ 2.7
FAM3A-204ENST00000369643 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
FAM3A-204ENST00000369643 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
FAM3A-204ENST00000369643 WRNQ14191 1432 aaPredicted RBP eCLIP31.84■■■□□ 2.69
FAM3A-204ENST00000369643 BIVM-ERCC5R4GMW8 1640 aa31.8■■■□□ 2.68
FAM3A-204ENST00000369643 TOP2BQ02880 1626 aa31.77■■■□□ 2.68
FAM3A-204ENST00000369643 CUX2O14529 1486 aa31.73■■■□□ 2.67
FAM3A-204ENST00000369643 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
FAM3A-204ENST00000369643 POLA1P09884 1462 aaPredicted RBP31.7■■■□□ 2.67
FAM3A-204ENST00000369643 RAD54L2Q9Y4B4 1467 aa31.63■■■□□ 2.65
FAM3A-204ENST00000369643 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
FAM3A-204ENST00000369643 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
FAM3A-204ENST00000369643 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
FAM3A-204ENST00000369643 SOGA1O94964 1423 aa31.49■■■□□ 2.63
FAM3A-204ENST00000369643 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
FAM3A-204ENST00000369643 IFT140Q96RY7 1462 aa31.47■■■□□ 2.63
FAM3A-204ENST00000369643 TRIM41Q8WV44 630 aa31.39■■■□□ 2.61
FAM3A-204ENST00000369643 ABCA10Q8WWZ4 1543 aa31.37■■■□□ 2.61
FAM3A-204ENST00000369643 EIF4G3O43432 1585 aaKnown RBP31.36■■■□□ 2.61
FAM3A-204ENST00000369643 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.614e-7■■■□□ 18.5
FAM3A-204ENST00000369643 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
FAM3A-204ENST00000369643 ABCA5Q8WWZ7 1642 aa31.3■■■□□ 2.6
FAM3A-204ENST00000369643 RUSC2Q8N2Y8 1516 aa31.26■■■□□ 2.59
FAM3A-204ENST00000369643 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
FAM3A-204ENST00000369643 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
FAM3A-204ENST00000369643 KIF27Q86VH2 1401 aa31.04■■■□□ 2.56
FAM3A-204ENST00000369643 GRIN2BQ13224 1484 aa31.03■■■□□ 2.56
FAM3A-204ENST00000369643 SNAPC4Q5SXM2 1469 aa31.03■■■□□ 2.56
FAM3A-204ENST00000369643 ERICH3Q5RHP9 1530 aa30.97■■■□□ 2.55
FAM3A-204ENST00000369643 IGF1RP08069 1367 aa30.96■■■□□ 2.55
FAM3A-204ENST00000369643 ADAMTS12P58397 1594 aa30.95■■■□□ 2.55
FAM3A-204ENST00000369643 CHD1O14646 1710 aa30.92■■■□□ 2.54
FAM3A-204ENST00000369643 FAM9AQ8IZU1 332 aaPredicted RBP30.9■■■□□ 2.54
FAM3A-204ENST00000369643 MAGI1Q96QZ7 1491 aaPredicted RBP30.88■■■□□ 2.53
FAM3A-204ENST00000369643 CUL7Q14999 1698 aa30.82■■■□□ 2.52
FAM3A-204ENST00000369643 SYNJ2O15056 1496 aa30.79■■■□□ 2.52
FAM3A-204ENST00000369643 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
FAM3A-204ENST00000369643 EEA1Q15075 1411 aa30.75■■■□□ 2.51
FAM3A-204ENST00000369643 CARMIL1Q5VZK9 1371 aa30.73■■■□□ 2.51
FAM3A-204ENST00000369643 CSRNP3Q8WYN3 585 aa30.72■■■□□ 2.51
FAM3A-204ENST00000369643 PRXQ9BXM0 1461 aa30.71■■■□□ 2.51
FAM3A-204ENST00000369643 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
FAM3A-204ENST00000369643 FBLN2P98095 1184 aa30.7■■■□□ 2.51
FAM3A-204ENST00000369643 CEP170Q5SW79 1584 aa30.65■■■□□ 2.5
FAM3A-204ENST00000369643 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
FAM3A-204ENST00000369643 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
FAM3A-204ENST00000369643 KIF21BO75037 1637 aa30.59■■■□□ 2.49
FAM3A-204ENST00000369643 EHMT2Q96KQ7 1210 aa30.57■■■□□ 2.48
FAM3A-204ENST00000369643 NUP160Q12769 1436 aa30.54■■■□□ 2.48
FAM3A-204ENST00000369643 CLASP1Q7Z460 1538 aa30.51■■■□□ 2.47
FAM3A-204ENST00000369643 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
FAM3A-204ENST00000369643 CTTNBP2Q8WZ74 1663 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms