RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
CHTOP-203ENST00000368690 EFCAB2Q5VUJ9 269 aa23.37■■□□□ 1.33
CHTOP-203ENST00000368690 CROCC2H7BZ55 1655 aa23.36■■□□□ 1.33
CHTOP-203ENST00000368690 SYCP2Q9BX26 1530 aa23.36■■□□□ 1.33
CHTOP-203ENST00000368690 ROCK2O75116 1388 aaKnown RBP23.36■■□□□ 1.33
CHTOP-203ENST00000368690 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
CHTOP-203ENST00000368690 USP35Q9P2H5 1018 aa23.34■■□□□ 1.33
CHTOP-203ENST00000368690 FOXD1Q16676 465 aa23.34■■□□□ 1.33
CHTOP-203ENST00000368690 PNISRQ8TF01 805 aaKnown RBP23.33■■□□□ 1.33
CHTOP-203ENST00000368690 C9orf84Q5VXU9 1444 aa23.33■■□□□ 1.33
CHTOP-203ENST00000368690 ABCA9Q8IUA7 1624 aa23.33■■□□□ 1.33
CHTOP-203ENST00000368690 ADGBQ8N7X0 1667 aa23.32■■□□□ 1.32
CHTOP-203ENST00000368690 KTN1Q86UP2 1357 aaKnown RBP23.32■■□□□ 1.32
CHTOP-203ENST00000368690 KDM5CP41229 1560 aa23.31■■□□□ 1.32
CHTOP-203ENST00000368690 CCDC141Q6ZP82 1450 aa23.31■■□□□ 1.32
CHTOP-203ENST00000368690 TCERG1O14776 1098 aaKnown RBP23.31■■□□□ 1.32
CHTOP-203ENST00000368690 LRPPRCP42704 1394 aaKnown RBP23.31■■□□□ 1.32
CHTOP-203ENST00000368690 ANKRD30AQ9BXX3 1397 aa23.31■■□□□ 1.32
CHTOP-203ENST00000368690 ARHGEF5Q12774 1597 aa23.31■■□□□ 1.32
CHTOP-203ENST00000368690 PLEKHH2Q8IVE3 1493 aa23.3■■□□□ 1.32
CHTOP-203ENST00000368690 USP47Q96K76 1375 aa23.29■■□□□ 1.32
CHTOP-203ENST00000368690 RSPH4AQ5TD94 716 aa23.28■■□□□ 1.32
CHTOP-203ENST00000368690 FANCAO15360 1455 aa23.28■■□□□ 1.32
CHTOP-203ENST00000368690 SHANK2Q9UPX8 1470 aa23.28■■□□□ 1.32
CHTOP-203ENST00000368690 PZPP20742 1482 aa23.27■■□□□ 1.32
CHTOP-203ENST00000368690 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
CHTOP-203ENST00000368690 MS4A1P11836 297 aa23.26■■□□□ 1.31
CHTOP-203ENST00000368690 PRKCSHP14314 528 aaPredicted RBP23.26■■□□□ 1.31
CHTOP-203ENST00000368690 KIAA1107Q9UPP5 1409 aa23.26■■□□□ 1.31
CHTOP-203ENST00000368690 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
CHTOP-203ENST00000368690 ADGRL2O95490 1459 aa23.25■■□□□ 1.31
CHTOP-203ENST00000368690 ARAP3Q8WWN8 1544 aa23.25■■□□□ 1.31
CHTOP-203ENST00000368690 ARHGEF12Q9NZN5 1544 aa23.25■■□□□ 1.31
CHTOP-203ENST00000368690 ABCC1P33527 1531 aa23.24■■□□□ 1.31
CHTOP-203ENST00000368690 KIF15Q9NS87 1388 aa23.24■■□□□ 1.31
CHTOP-203ENST00000368690 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
CHTOP-203ENST00000368690 CD109Q6YHK3 1445 aa23.24■■□□□ 1.31
CHTOP-203ENST00000368690 RRP1P56182 461 aaKnown RBP23.22■■□□□ 1.31
CHTOP-203ENST00000368690 TMC1Q8TDI8 760 aa23.22■■□□□ 1.31
CHTOP-203ENST00000368690 RALGAPBQ86X10 1494 aa23.21■■□□□ 1.31
CHTOP-203ENST00000368690 ANKRD50Q9ULJ7 1429 aa23.19■■□□□ 1.3
CHTOP-203ENST00000368690 TRAPPC8Q9Y2L5 1435 aa23.19■■□□□ 1.3
CHTOP-203ENST00000368690 ADGRL1O94910 1474 aa23.19■■□□□ 1.3
CHTOP-203ENST00000368690 PPM1GO15355 546 aaPredicted RBP23.18■■□□□ 1.3
CHTOP-203ENST00000368690 RALBP1Q15311 655 aa23.18■■□□□ 1.3
CHTOP-203ENST00000368690 AFAP1Q8N556 730 aa23.18■■□□□ 1.3
CHTOP-203ENST00000368690 PDE3BQ13370 1112 aa23.17■■□□□ 1.3
CHTOP-203ENST00000368690 MYBBP1AQ9BQG0 1328 aaKnown RBP23.17■■□□□ 1.3
CHTOP-203ENST00000368690 WASHC2CQ9Y4E1 1318 aa23.17■■□□□ 1.3
CHTOP-203ENST00000368690 BACH2Q9BYV9 841 aa23.17■■□□□ 1.3
CHTOP-203ENST00000368690 PDE4AP27815 886 aa23.16■■□□□ 1.3
CHTOP-203ENST00000368690 E9PCH4 1651 aa23.16■■□□□ 1.3
CHTOP-203ENST00000368690 SCAPERQ9BY12 1400 aa23.15■■□□□ 1.3
CHTOP-203ENST00000368690 FAM69CQ0P6D2 419 aa23.14■■□□□ 1.29
CHTOP-203ENST00000368690 SPAG9O60271 1321 aaKnown RBP23.13■■□□□ 1.29
CHTOP-203ENST00000368690 RCAN3Q9UKA8 241 aa23.13■■□□□ 1.29
CHTOP-203ENST00000368690 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
CHTOP-203ENST00000368690 INSRP06213 1382 aa23.12■■□□□ 1.29
CHTOP-203ENST00000368690 NEFMP07197 916 aa23.11■■□□□ 1.29
CHTOP-203ENST00000368690 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
CHTOP-203ENST00000368690 ZMYM4Q5VZL5 1548 aa23.1■■□□□ 1.29
CHTOP-203ENST00000368690 CFAP74Q9C0B2 1584 aa23.09■■□□□ 1.29
CHTOP-203ENST00000368690 DDRGK1Q96HY6 314 aa23.08■■□□□ 1.29
CHTOP-203ENST00000368690 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.29
CHTOP-203ENST00000368690 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
CHTOP-203ENST00000368690 IL27Q8NEV9 243 aa23.06■■□□□ 1.28
CHTOP-203ENST00000368690 DIP2BQ9P265 1576 aa23.06■■□□□ 1.28
CHTOP-203ENST00000368690 MAP3K4Q9Y6R4 1608 aa23.06■■□□□ 1.28
CHTOP-203ENST00000368690 POLR3GLQ9BT43 218 aa23.05■■□□□ 1.28
CHTOP-203ENST00000368690 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
CHTOP-203ENST00000368690 NUP155O75694 1391 aa23.04■■□□□ 1.28
CHTOP-203ENST00000368690 ZFYVE16Q7Z3T8 1539 aa23.04■■□□□ 1.28
CHTOP-203ENST00000368690 GLI2P10070 1586 aa23.03■■□□□ 1.28
CHTOP-203ENST00000368690 ZNF518AQ6AHZ1 1483 aa23.02■■□□□ 1.27
CHTOP-203ENST00000368690 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
CHTOP-203ENST00000368690 NLRP13Q86W25 1043 aa23.01■■□□□ 1.27
CHTOP-203ENST00000368690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.274e-10■□□□□ 9.2
CHTOP-203ENST00000368690 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
CHTOP-203ENST00000368690 TSPOAP1O95153 1857 aa23.01■■□□□ 1.27
CHTOP-203ENST00000368690 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
CHTOP-203ENST00000368690 DUOX2Q9NRD8 1548 aa23.01■■□□□ 1.27
CHTOP-203ENST00000368690 RTEL1-TNFRSF6BF6WH68 1400 aa23■■□□□ 1.27
CHTOP-203ENST00000368690 PKD2Q13563 968 aa23■■□□□ 1.27
CHTOP-203ENST00000368690 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
CHTOP-203ENST00000368690 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
CHTOP-203ENST00000368690 KDM5DQ9BY66 1539 aa23■■□□□ 1.27
CHTOP-203ENST00000368690 NEO1Q92859 1461 aa23■■□□□ 1.27
CHTOP-203ENST00000368690 POGZQ7Z3K3 1410 aa22.98■■□□□ 1.27
CHTOP-203ENST00000368690 RAPGEF3O95398 923 aa22.97■■□□□ 1.27
CHTOP-203ENST00000368690 CNGB1Q14028 1251 aaPredicted RBP22.97■■□□□ 1.27
CHTOP-203ENST00000368690 ZNF326Q5BKZ1 582 aaKnown RBP22.97■■□□□ 1.27
CHTOP-203ENST00000368690 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
CHTOP-203ENST00000368690 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
CHTOP-203ENST00000368690 BLMP54132 1417 aaPredicted RBP22.94■■□□□ 1.26
CHTOP-203ENST00000368690 ST20-MTHFSA0A0A6YYL1 179 aa22.93■■□□□ 1.26
CHTOP-203ENST00000368690 GSE1Q14687 1217 aa22.91■■□□□ 1.26
CHTOP-203ENST00000368690 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
CHTOP-203ENST00000368690 KIF13AQ9H1H9 1805 aa22.89■■□□□ 1.26
CHTOP-203ENST00000368690 FAM135AQ9P2D6 1515 aa22.89■■□□□ 1.26
CHTOP-203ENST00000368690 UNC13BO14795 1591 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms