RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 CCDC7Q96M83 1385 aa24.39■■□□□ 1.5
LMNA-205ENST00000368299 INO80Q9ULG1 1556 aaPredicted RBP24.39■■□□□ 1.49
LMNA-205ENST00000368299 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
LMNA-205ENST00000368299 SCAPERQ9BY12 1400 aa24.37■■□□□ 1.49
LMNA-205ENST00000368299 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
LMNA-205ENST00000368299 POLR1AO95602 1720 aaPredicted RBP24.37■■□□□ 1.49
LMNA-205ENST00000368299 ZNF326Q5BKZ1 582 aaKnown RBP24.36■■□□□ 1.49
LMNA-205ENST00000368299 CNTLNQ9NXG0 1405 aa24.36■■□□□ 1.49
LMNA-205ENST00000368299 USP47Q96K76 1375 aa24.35■■□□□ 1.49
LMNA-205ENST00000368299 DCAF11Q8TEB1 546 aa24.32■■□□□ 1.48
LMNA-205ENST00000368299 KDM5CP41229 1560 aa24.32■■□□□ 1.48
LMNA-205ENST00000368299 CFAP74Q9C0B2 1584 aa24.32■■□□□ 1.48
LMNA-205ENST00000368299 C11orf95C9JLR9 678 aaPredicted RBP24.32■■□□□ 1.48
LMNA-205ENST00000368299 DEPDC5O75140 1603 aa24.31■■□□□ 1.48
LMNA-205ENST00000368299 ARID4BQ4LE39 1312 aaPredicted RBP24.3■■□□□ 1.48
LMNA-205ENST00000368299 KIF7Q2M1P5 1343 aa24.29■■□□□ 1.48
LMNA-205ENST00000368299 ZNF518AQ6AHZ1 1483 aa24.29■■□□□ 1.48
LMNA-205ENST00000368299 CD109Q6YHK3 1445 aa24.29■■□□□ 1.48
LMNA-205ENST00000368299 EIF2AK4Q9P2K8 1649 aaKnown RBP24.28■■□□□ 1.48
LMNA-205ENST00000368299 DHX29Q7Z478 1369 aaKnown RBP24.27■■□□□ 1.48
LMNA-205ENST00000368299 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
LMNA-205ENST00000368299 KDM2AQ9Y2K7 1162 aa24.27■■□□□ 1.48
LMNA-205ENST00000368299 KANK1Q14678 1352 aa24.26■■□□□ 1.47
LMNA-205ENST00000368299 PRAG1Q86YV5 1406 aa24.25■■□□□ 1.47
LMNA-205ENST00000368299 MYT1LQ9UL68 1186 aa24.24■■□□□ 1.47
LMNA-205ENST00000368299 A2MP01023 1474 aa24.23■■□□□ 1.47
LMNA-205ENST00000368299 VWDEQ8N2E2 1590 aa24.23■■□□□ 1.47
LMNA-205ENST00000368299 E9PCH4 1651 aa24.22■■□□□ 1.47
LMNA-205ENST00000368299 TET3O43151 1660 aa24.22■■□□□ 1.47
LMNA-205ENST00000368299 ROCK2O75116 1388 aaKnown RBP24.21■■□□□ 1.47
LMNA-205ENST00000368299 TRPM2O94759 1503 aa24.2■■□□□ 1.46
LMNA-205ENST00000368299 PRDM15P57071 1507 aaPredicted RBP24.2■■□□□ 1.46
LMNA-205ENST00000368299 RGL3Q3MIN7 710 aa24.2■■□□□ 1.46
LMNA-205ENST00000368299 KIDINS220Q9ULH0 1771 aa24.2■■□□□ 1.46
LMNA-205ENST00000368299 TRPM1Q7Z4N2 1603 aa24.2■■□□□ 1.46
LMNA-205ENST00000368299 PTPRTO14522 1441 aa24.19■■□□□ 1.46
LMNA-205ENST00000368299 POGZQ7Z3K3 1410 aa24.19■■□□□ 1.46
LMNA-205ENST00000368299 BCORL1Q5H9F3 1711 aa24.19■■□□□ 1.46
LMNA-205ENST00000368299 KIF3BO15066 747 aa24.18■■□□□ 1.46
LMNA-205ENST00000368299 GPRASP1Q5JY77 1395 aa24.17■■□□□ 1.46
LMNA-205ENST00000368299 NEO1Q92859 1461 aa24.16■■□□□ 1.46
LMNA-205ENST00000368299 MLH3Q9UHC1 1453 aa24.16■■□□□ 1.46
LMNA-205ENST00000368299 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
LMNA-205ENST00000368299 LAMC1P11047 1609 aa24.15■■□□□ 1.46
LMNA-205ENST00000368299 STAC3Q96MF2 364 aa24.14■■□□□ 1.46
LMNA-205ENST00000368299 PRKRIP1Q9H875 184 aaPredicted RBP24.14■■□□□ 1.45
LMNA-205ENST00000368299 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.45
LMNA-205ENST00000368299 ST20-MTHFSA0A0A6YYL1 179 aa24.12■■□□□ 1.45
LMNA-205ENST00000368299 HECW2Q9P2P5 1572 aa24.1■■□□□ 1.45
LMNA-205ENST00000368299 CEP152O94986 1710 aa24.1■■□□□ 1.45
LMNA-205ENST00000368299 LMTK2Q8IWU2 1503 aa24.08■■□□□ 1.45
LMNA-205ENST00000368299 RNF17Q9BXT8 1623 aaKnown RBP24.08■■□□□ 1.45
LMNA-205ENST00000368299 NEURL4Q96JN8 1562 aa24.08■■□□□ 1.45
LMNA-205ENST00000368299 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
LMNA-205ENST00000368299 EFCAB6Q5THR3 1501 aa24.06■■□□□ 1.44
LMNA-205ENST00000368299 NBPF1Q3BBV0 1214 aa24.04■■□□□ 1.44
LMNA-205ENST00000368299 GLI2P10070 1586 aa24.04■■□□□ 1.44
LMNA-205ENST00000368299 POLR3GLQ9BT43 218 aa24.03■■□□□ 1.44
LMNA-205ENST00000368299 MAP3K4Q9Y6R4 1608 aa24.03■■□□□ 1.44
LMNA-205ENST00000368299 CYB5RLQ6IPT4 315 aa24.03■■□□□ 1.44
LMNA-205ENST00000368299 FRMPD1Q5SYB0 1578 aa24.02■■□□□ 1.44
LMNA-205ENST00000368299 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
LMNA-205ENST00000368299 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
LMNA-205ENST00000368299 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
LMNA-205ENST00000368299 SUPT16HQ9Y5B9 1047 aaKnown RBP24■■□□□ 1.43
LMNA-205ENST00000368299 MADDQ8WXG6 1647 aa24■■□□□ 1.43
LMNA-205ENST00000368299 PPRC1Q5VV67 1664 aaKnown RBP23.98■■□□□ 1.43
LMNA-205ENST00000368299 ABCA6Q8N139 1617 aa23.98■■□□□ 1.43
LMNA-205ENST00000368299 MRS2Q9HD23 443 aa23.96■■□□□ 1.43
LMNA-205ENST00000368299 COL17A1Q9UMD9 1497 aaPredicted RBP23.94■■□□□ 1.42
LMNA-205ENST00000368299 RAPGEF3O95398 923 aa23.94■■□□□ 1.42
LMNA-205ENST00000368299 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
LMNA-205ENST00000368299 KTN1Q86UP2 1357 aaKnown RBP23.93■■□□□ 1.42
LMNA-205ENST00000368299 HNRNPUQ00839 825 aaKnown RBP eCLIP23.92■■□□□ 1.42
LMNA-205ENST00000368299 TESK2Q96S53 571 aa23.92■■□□□ 1.42
LMNA-205ENST00000368299 KIF1BO60333 1816 aa23.92■■□□□ 1.42
LMNA-205ENST00000368299 CCDC184Q52MB2 194 aa23.91■■□□□ 1.42
LMNA-205ENST00000368299 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
LMNA-205ENST00000368299 MYOM2P54296 1465 aa23.91■■□□□ 1.42
LMNA-205ENST00000368299 KIAA1210Q9ULL0 1709 aa23.9■■□□□ 1.42
LMNA-205ENST00000368299 GGT6Q6P531 493 aa23.9■■□□□ 1.42
LMNA-205ENST00000368299 TMF1P82094 1093 aa23.89■■□□□ 1.41
LMNA-205ENST00000368299 NPATQ14207 1427 aa23.88■■□□□ 1.41
LMNA-205ENST00000368299 ABCC3O15438 1527 aa23.88■■□□□ 1.41
LMNA-205ENST00000368299 IQGAP1P46940 1657 aa23.88■■□□□ 1.41
LMNA-205ENST00000368299 WASHC2CQ9Y4E1 1318 aa23.87■■□□□ 1.41
LMNA-205ENST00000368299 UGGT1Q9NYU2 1555 aa23.87■■□□□ 1.41
LMNA-205ENST00000368299 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
LMNA-205ENST00000368299 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
LMNA-205ENST00000368299 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
LMNA-205ENST00000368299 RALBP1Q15311 655 aa23.84■■□□□ 1.41
LMNA-205ENST00000368299 DISP3Q9P2K9 1392 aa23.84■■□□□ 1.41
LMNA-205ENST00000368299 ADGRB3O60242 1522 aa23.84■■□□□ 1.41
LMNA-205ENST00000368299 FAM9BQ8IZU0 186 aa23.84■■□□□ 1.41
LMNA-205ENST00000368299 MYT1Q01538 1121 aa23.83■■□□□ 1.41
LMNA-205ENST00000368299 EIF3AQ14152 1382 aaKnown RBP23.83■■□□□ 1.4
LMNA-205ENST00000368299 IFT172Q9UG01 1749 aa23.82■■□□□ 1.4
LMNA-205ENST00000368299 ZMYM4Q5VZL5 1548 aa23.82■■□□□ 1.4
LMNA-205ENST00000368299 CAMSAP1Q5T5Y3 1602 aa23.82■■□□□ 1.4
LMNA-205ENST00000368299 ZC3H13Q5T200 1668 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms