RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
NUP43-203ENST00000367404 PLXNC1O60486 1568 aa16.05■□□□□ 0.16
NUP43-203ENST00000367404 ESF1Q9H501 851 aaKnown RBP16.05■□□□□ 0.16
NUP43-203ENST00000367404 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
NUP43-203ENST00000367404 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
NUP43-203ENST00000367404 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
NUP43-203ENST00000367404 INO80Q9ULG1 1556 aaPredicted RBP16.04■□□□□ 0.16
NUP43-203ENST00000367404 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
NUP43-203ENST00000367404 PLEKHH2Q8IVE3 1493 aa16.03■□□□□ 0.16
NUP43-203ENST00000367404 ATP7AQ04656 1500 aa16.03■□□□□ 0.16
NUP43-203ENST00000367404 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
NUP43-203ENST00000367404 ZMYM3Q14202 1370 aa16■□□□□ 0.15
NUP43-203ENST00000367404 A2MP01023 1474 aa16■□□□□ 0.15
NUP43-203ENST00000367404 ZNF777Q9ULD5 760 aaPredicted RBP16■□□□□ 0.15
NUP43-203ENST00000367404 CAMSAP1Q5T5Y3 1602 aa15.99■□□□□ 0.15
NUP43-203ENST00000367404 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
NUP43-203ENST00000367404 CCNB3Q8WWL7 1395 aa15.98■□□□□ 0.15
NUP43-203ENST00000367404 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
NUP43-203ENST00000367404 PTPRKQ15262 1439 aa15.97■□□□□ 0.15
NUP43-203ENST00000367404 CFDP1Q9UEE9 299 aaPredicted RBP15.97■□□□□ 0.15
NUP43-203ENST00000367404 ZNF142P52746 1687 aaPredicted RBP15.97■□□□□ 0.15
NUP43-203ENST00000367404 MYO3AQ8NEV4 1616 aa15.96■□□□□ 0.15
NUP43-203ENST00000367404 SUPT6HQ7KZ85 1726 aaKnown RBP15.95■□□□□ 0.14
NUP43-203ENST00000367404 TCOF1Q13428 1488 aaKnown RBP15.95■□□□□ 0.14
NUP43-203ENST00000367404 MBD5Q9P267 1494 aa15.95■□□□□ 0.14
NUP43-203ENST00000367404 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
NUP43-203ENST00000367404 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
NUP43-203ENST00000367404 DISP3Q9P2K9 1392 aa15.94■□□□□ 0.14
NUP43-203ENST00000367404 CEP170BQ9Y4F5 1589 aaPredicted RBP15.94■□□□□ 0.14
NUP43-203ENST00000367404 CLTCQ00610 1675 aaKnown RBP15.94■□□□□ 0.14
NUP43-203ENST00000367404 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
NUP43-203ENST00000367404 RTEL1-TNFRSF6BF6WH68 1400 aa15.92■□□□□ 0.14
NUP43-203ENST00000367404 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
NUP43-203ENST00000367404 SPATA31D1Q6ZQQ2 1576 aa15.92■□□□□ 0.14
NUP43-203ENST00000367404 PKD2Q13563 968 aa15.91■□□□□ 0.14
NUP43-203ENST00000367404 ILDR2Q71H61 639 aa15.91■□□□□ 0.14
NUP43-203ENST00000367404 ADGBQ8N7X0 1667 aa15.91■□□□□ 0.14
NUP43-203ENST00000367404 PITPNM1O00562 1244 aa15.9■□□□□ 0.14
NUP43-203ENST00000367404 NCKAP5LQ9HCH0 1330 aa15.9■□□□□ 0.14
NUP43-203ENST00000367404 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
NUP43-203ENST00000367404 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
NUP43-203ENST00000367404 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
NUP43-203ENST00000367404 ZNF644Q9H582 1327 aaPredicted RBP15.89■□□□□ 0.13
NUP43-203ENST00000367404 GGT6Q6P531 493 aa15.88■□□□□ 0.13
NUP43-203ENST00000367404 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
NUP43-203ENST00000367404 DHX29Q7Z478 1369 aaKnown RBP15.87■□□□□ 0.13
NUP43-203ENST00000367404 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
NUP43-203ENST00000367404 SOCS7O14512 581 aa15.86■□□□□ 0.13
NUP43-203ENST00000367404 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
NUP43-203ENST00000367404 DNMT1P26358 1616 aaKnown RBP15.84■□□□□ 0.13
NUP43-203ENST00000367404 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
NUP43-203ENST00000367404 PZPP20742 1482 aa15.83■□□□□ 0.12
NUP43-203ENST00000367404 CAMSAP2Q08AD1 1489 aa15.82■□□□□ 0.12
NUP43-203ENST00000367404 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
NUP43-203ENST00000367404 NEURL4Q96JN8 1562 aa15.81■□□□□ 0.12
NUP43-203ENST00000367404 TNRQ92752 1358 aa15.8■□□□□ 0.12
NUP43-203ENST00000367404 UBAP1LF5GYI3 381 aa15.79■□□□□ 0.12
NUP43-203ENST00000367404 ARHGEF5Q12774 1597 aa15.79■□□□□ 0.12
NUP43-203ENST00000367404 KIF3BO15066 747 aa15.77■□□□□ 0.12
NUP43-203ENST00000367404 RSPH4AQ5TD94 716 aa15.77■□□□□ 0.12
NUP43-203ENST00000367404 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
NUP43-203ENST00000367404 CPS1P31327 1500 aa15.77■□□□□ 0.11
NUP43-203ENST00000367404 FBXO31Q5XUX0 539 aaPredicted RBP15.76■□□□□ 0.11
NUP43-203ENST00000367404 NLRP1Q9C000 1473 aa15.76■□□□□ 0.11
NUP43-203ENST00000367404 POLR1AO95602 1720 aaPredicted RBP15.75■□□□□ 0.11
NUP43-203ENST00000367404 MIA2Q96PC5 1412 aa15.75■□□□□ 0.11
NUP43-203ENST00000367404 MED14O60244 1454 aa15.73■□□□□ 0.11
NUP43-203ENST00000367404 SHANK2Q9UPX8 1470 aa15.73■□□□□ 0.11
NUP43-203ENST00000367404 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
NUP43-203ENST00000367404 RNF17Q9BXT8 1623 aaKnown RBP15.72■□□□□ 0.11
NUP43-203ENST00000367404 WASHC2CQ9Y4E1 1318 aa15.72■□□□□ 0.11
NUP43-203ENST00000367404 VWDEQ8N2E2 1590 aa15.72■□□□□ 0.11
NUP43-203ENST00000367404 MAST1Q9Y2H9 1570 aa15.72■□□□□ 0.11
NUP43-203ENST00000367404 DEPDC5O75140 1603 aa15.72■□□□□ 0.11
NUP43-203ENST00000367404 UGGT1Q9NYU2 1555 aa15.71■□□□□ 0.11
NUP43-203ENST00000367404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.71■□□□□ 0.11
NUP43-203ENST00000367404 ABCC3O15438 1527 aa15.7■□□□□ 0.1
NUP43-203ENST00000367404 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
NUP43-203ENST00000367404 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
NUP43-203ENST00000367404 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
NUP43-203ENST00000367404 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
NUP43-203ENST00000367404 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
NUP43-203ENST00000367404 ZC3H13Q5T200 1668 aaKnown RBP15.69■□□□□ 0.1
NUP43-203ENST00000367404 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
NUP43-203ENST00000367404 TSPY4P0CV99 314 aa15.68■□□□□ 0.1
NUP43-203ENST00000367404 TSPY10P0CW01 314 aa15.68■□□□□ 0.1
NUP43-203ENST00000367404 MROH1Q8NDA8 1641 aa15.68■□□□□ 0.1
NUP43-203ENST00000367404 EIF2AK4Q9P2K8 1649 aaKnown RBP15.68■□□□□ 0.1
NUP43-203ENST00000367404 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
NUP43-203ENST00000367404 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
NUP43-203ENST00000367404 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
NUP43-203ENST00000367404 TOM1O60784 492 aa15.66■□□□□ 0.1
NUP43-203ENST00000367404 HSPA1LP34931 641 aa15.66■□□□□ 0.1
NUP43-203ENST00000367404 MAP3K1Q13233 1512 aa15.65■□□□□ 0.1
NUP43-203ENST00000367404 MED1Q15648 1581 aaPredicted RBP15.65■□□□□ 0.1
NUP43-203ENST00000367404 IQGAP1P46940 1657 aa15.63■□□□□ 0.09
NUP43-203ENST00000367404 MYOM3Q5VTT5 1437 aa15.62■□□□□ 0.09
NUP43-203ENST00000367404 PIP4K2BP78356 416 aa15.62■□□□□ 0.09
NUP43-203ENST00000367404 SYNMO15061 1565 aa15.62■□□□□ 0.09
NUP43-203ENST00000367404 LRRC7Q96NW7 1537 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms