RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 RNF17Q9BXT8 1623 aaKnown RBP30.19■■■□□ 2.42
CD55-203ENST00000367063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.18■■■□□ 2.42
CD55-203ENST00000367063 DEPDC5O75140 1603 aa30.17■■■□□ 2.42
CD55-203ENST00000367063 UNC13BO14795 1591 aa30.15■■■□□ 2.42
CD55-203ENST00000367063 MROH1Q8NDA8 1641 aa30.14■■■□□ 2.42
CD55-203ENST00000367063 TRIM52Q96A61 297 aa30.14■■■□□ 2.41
CD55-203ENST00000367063 PRDM15P57071 1507 aaPredicted RBP30.13■■■□□ 2.41
CD55-203ENST00000367063 HRCP23327 699 aa30.11■■■□□ 2.41
CD55-203ENST00000367063 NUP155O75694 1391 aa30.1■■■□□ 2.41
CD55-203ENST00000367063 KANK1Q14678 1352 aa30.1■■■□□ 2.41
CD55-203ENST00000367063 ACIN1Q9UKV3 1341 aaKnown RBP30.08■■■□□ 2.41
CD55-203ENST00000367063 WASHC2CQ9Y4E1 1318 aa30.07■■■□□ 2.4
CD55-203ENST00000367063 PPP6R1Q9UPN7 881 aa30.07■■■□□ 2.4
CD55-203ENST00000367063 ESF1Q9H501 851 aaKnown RBP30.06■■■□□ 2.4
CD55-203ENST00000367063 VWDEQ8N2E2 1590 aa30.04■■■□□ 2.4
CD55-203ENST00000367063 KDM5DQ9BY66 1539 aa30.04■■■□□ 2.4
CD55-203ENST00000367063 IQGAP3Q86VI3 1631 aa30.03■■■□□ 2.4
CD55-203ENST00000367063 CEP152O94986 1710 aa30.02■■■□□ 2.4
CD55-203ENST00000367063 FER1L4A9Z1Z3 1794 aa30.02■■■□□ 2.4
CD55-203ENST00000367063 ABCC3O15438 1527 aa30.01■■■□□ 2.4
CD55-203ENST00000367063 FAM135AQ9P2D6 1515 aa30.01■■■□□ 2.4
CD55-203ENST00000367063 ADAMTSL3P82987 1691 aa30.01■■■□□ 2.39
CD55-203ENST00000367063 CLTCQ00610 1675 aaKnown RBP30.01■■■□□ 2.39
CD55-203ENST00000367063 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.39
CD55-203ENST00000367063 MADDQ8WXG6 1647 aa29.98■■■□□ 2.39
CD55-203ENST00000367063 PZPP20742 1482 aa29.97■■■□□ 2.39
CD55-203ENST00000367063 SLC4A1APQ9BWU0 796 aaKnown RBP29.97■■■□□ 2.39
CD55-203ENST00000367063 LMTK2Q8IWU2 1503 aa29.96■■■□□ 2.39
CD55-203ENST00000367063 CNTLNQ9NXG0 1405 aa29.96■■■□□ 2.39
CD55-203ENST00000367063 MPHOSPH9Q99550 1183 aa29.94■■■□□ 2.38
CD55-203ENST00000367063 CAMSAP1Q5T5Y3 1602 aa29.93■■■□□ 2.38
CD55-203ENST00000367063 TET3O43151 1660 aa29.93■■■□□ 2.38
CD55-203ENST00000367063 RIMS1Q86UR5 1692 aaKnown RBP29.93■■■□□ 2.38
CD55-203ENST00000367063 ZMYM3Q14202 1370 aa29.9■■■□□ 2.38
CD55-203ENST00000367063 EFCAB6Q5THR3 1501 aa29.9■■■□□ 2.38
CD55-203ENST00000367063 MROH2AA6NES4 1674 aa29.9■■■□□ 2.38
CD55-203ENST00000367063 KDM4FA0A1W2PPD8 638 aa29.87■■■□□ 2.37
CD55-203ENST00000367063 PKD2Q13563 968 aa29.87■■■□□ 2.37
CD55-203ENST00000367063 E9PCH4 1651 aa29.86■■■□□ 2.37
CD55-203ENST00000367063 NPATQ14207 1427 aa29.84■■■□□ 2.37
CD55-203ENST00000367063 ARHGAP31Q2M1Z3 1444 aa29.84■■■□□ 2.37
CD55-203ENST00000367063 PLPPR3Q6T4P5 718 aa29.83■■■□□ 2.37
CD55-203ENST00000367063 C3P01024 1663 aa29.83■■■□□ 2.37
CD55-203ENST00000367063 CEBPAP49715 358 aaPredicted RBP29.82■■■□□ 2.36
CD55-203ENST00000367063 FOXD1Q16676 465 aa29.82■■■□□ 2.36
CD55-203ENST00000367063 CFAP65Q6ZU64 1925 aaKnown RBP29.81■■■□□ 2.36
CD55-203ENST00000367063 DHX57Q6P158 1386 aaKnown RBP29.81■■■□□ 2.36
CD55-203ENST00000367063 RPRD2Q5VT52 1461 aaKnown RBP29.81■■■□□ 2.36
CD55-203ENST00000367063 PTPRMP28827 1452 aa29.79■■■□□ 2.36
CD55-203ENST00000367063 FBXO31Q5XUX0 539 aaPredicted RBP29.77■■■□□ 2.36
CD55-203ENST00000367063 PREX1Q8TCU6 1659 aa29.74■■■□□ 2.35
CD55-203ENST00000367063 ERVK-7P63135 1459 aa29.72■■■□□ 2.35
CD55-203ENST00000367063 SPHKAPQ2M3C7 1700 aa29.71■■■□□ 2.35
CD55-203ENST00000367063 SPATA31D1Q6ZQQ2 1576 aa29.69■■■□□ 2.34
CD55-203ENST00000367063 NOS1P29475 1434 aa29.69■■■□□ 2.34
CD55-203ENST00000367063 PTPRTO14522 1441 aa29.67■■■□□ 2.34
CD55-203ENST00000367063 PLA2R1Q13018 1463 aa29.66■■■□□ 2.34
CD55-203ENST00000367063 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
CD55-203ENST00000367063 SYNMO15061 1565 aa29.65■■■□□ 2.34
CD55-203ENST00000367063 TNRQ92752 1358 aa29.65■■■□□ 2.34
CD55-203ENST00000367063 ANKRD30BQ9BXX2 1392 aa29.64■■■□□ 2.34
CD55-203ENST00000367063 TRPM2O94759 1503 aa29.64■■■□□ 2.34
CD55-203ENST00000367063 UGGT1Q9NYU2 1555 aa29.6■■■□□ 2.33
CD55-203ENST00000367063 CCDC144AA2RUR9 1427 aa29.58■■■□□ 2.33
CD55-203ENST00000367063 SLC52A1Q9NWF4 448 aa29.57■■■□□ 2.32
CD55-203ENST00000367063 SETD1BQ9UPS6 1966 aaKnown RBP29.56■■■□□ 2.32
CD55-203ENST00000367063 CLTCL1P53675 1640 aa29.56■■■□□ 2.32
CD55-203ENST00000367063 IDI1Q13907 227 aa29.55■■■□□ 2.32
CD55-203ENST00000367063 PIK3C2BO00750 1634 aa29.55■■■□□ 2.32
CD55-203ENST00000367063 MYO3AQ8NEV4 1616 aa29.53■■■□□ 2.32
CD55-203ENST00000367063 NLRP1Q9C000 1473 aa29.53■■■□□ 2.32
CD55-203ENST00000367063 CLSPNQ9HAW4 1339 aa29.5■■■□□ 2.31
CD55-203ENST00000367063 SIN3AQ96ST3 1273 aa29.5■■■□□ 2.31
CD55-203ENST00000367063 CHGAP10645 457 aaKnown RBP29.48■■■□□ 2.31
CD55-203ENST00000367063 STAG3Q9UJ98 1225 aa29.47■■■□□ 2.31
CD55-203ENST00000367063 UHRF1BP1Q6BDS2 1440 aa29.47■■■□□ 2.31
CD55-203ENST00000367063 KIF1BO60333 1816 aa29.47■■■□□ 2.31
CD55-203ENST00000367063 NEUROD1Q13562 356 aa29.47■■■□□ 2.31
CD55-203ENST00000367063 A2ML1A8K2U0 1454 aa29.44■■■□□ 2.3
CD55-203ENST00000367063 CEP170BQ9Y4F5 1589 aaPredicted RBP29.44■■■□□ 2.3
CD55-203ENST00000367063 ZNF142P52746 1687 aaPredicted RBP29.42■■■□□ 2.3
CD55-203ENST00000367063 ADGRB3O60242 1522 aa29.42■■■□□ 2.3
CD55-203ENST00000367063 TMEM131LA2VDJ0 1609 aa29.41■■■□□ 2.3
CD55-203ENST00000367063 UBR1Q8IWV7 1749 aa29.4■■■□□ 2.3
CD55-203ENST00000367063 MYO5BQ9ULV0 1848 aa29.39■■■□□ 2.3
CD55-203ENST00000367063 KDM5AP29375 1690 aaKnown RBP29.39■■■□□ 2.3
CD55-203ENST00000367063 RGL3Q3MIN7 710 aa29.37■■■□□ 2.29
CD55-203ENST00000367063 SPATA31E1Q6ZUB1 1445 aa29.37■■■□□ 2.29
CD55-203ENST00000367063 ZNF326Q5BKZ1 582 aaKnown RBP29.37■■■□□ 2.29
CD55-203ENST00000367063 THEMISQ8N1K5 641 aaPredicted RBP29.34■■■□□ 2.29
CD55-203ENST00000367063 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
CD55-203ENST00000367063 NEURL4Q96JN8 1562 aa29.33■■■□□ 2.29
CD55-203ENST00000367063 LMTK3Q96Q04 1460 aa29.33■■■□□ 2.29
CD55-203ENST00000367063 TONSLQ96HA7 1378 aa29.28■■■□□ 2.28
CD55-203ENST00000367063 TMEM2Q9UHN6 1383 aa29.28■■■□□ 2.28
CD55-203ENST00000367063 RPGRIP1LQ68CZ1 1315 aa29.25■■■□□ 2.27
CD55-203ENST00000367063 HSPA2P54652 639 aa29.25■■■□□ 2.27
CD55-203ENST00000367063 RIMS2Q9UQ26 1411 aa29.24■■■□□ 2.27
CD55-203ENST00000367063 L3MBTL2Q969R5 705 aa29.24■■■□□ 2.27
CD55-203ENST00000367063 SLIT1O75093 1534 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms