RNA–Protein interactions for RNA: ENST00000366858.7

CNIH4-203, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3 BASIC

Gene CNIH4, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-203ENST00000366858 NCOA1Q15788 1441 aa30.93■■■□□ 2.54
CNIH4-203ENST00000366858 ITGAEP38570 1179 aa30.93■■■□□ 2.54
CNIH4-203ENST00000366858 ERBINQ96RT1 1412 aa30.92■■■□□ 2.54
CNIH4-203ENST00000366858 WASHC2CQ9Y4E1 1318 aa30.92■■■□□ 2.54
CNIH4-203ENST00000366858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.92■■■□□ 2.547e-7■■■■■ 52.8
CNIH4-203ENST00000366858 ADGRL2O95490 1459 aa30.91■■■□□ 2.54
CNIH4-203ENST00000366858 KDM5DQ9BY66 1539 aa30.9■■■□□ 2.54
CNIH4-203ENST00000366858 RNF17Q9BXT8 1623 aaKnown RBP30.9■■■□□ 2.54
CNIH4-203ENST00000366858 FAM135AQ9P2D6 1515 aa30.88■■■□□ 2.53
CNIH4-203ENST00000366858 RRBP1Q9P2E9 1410 aaKnown RBP30.87■■■□□ 2.53
CNIH4-203ENST00000366858 LMTK3Q96Q04 1460 aa30.87■■■□□ 2.53
CNIH4-203ENST00000366858 PTPRKQ15262 1439 aa30.86■■■□□ 2.53
CNIH4-203ENST00000366858 PREX1Q8TCU6 1659 aa30.84■■■□□ 2.53
CNIH4-203ENST00000366858 NPATQ14207 1427 aa30.81■■■□□ 2.52
CNIH4-203ENST00000366858 UHRF1BP1Q6BDS2 1440 aa30.81■■■□□ 2.52
CNIH4-203ENST00000366858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.8■■■□□ 2.52
CNIH4-203ENST00000366858 ROCK1Q13464 1354 aa30.79■■■□□ 2.52
CNIH4-203ENST00000366858 MROH1Q8NDA8 1641 aa30.79■■■□□ 2.52
CNIH4-203ENST00000366858 ZC3H13Q5T200 1668 aaKnown RBP30.78■■■□□ 2.52
CNIH4-203ENST00000366858 ANKRD50Q9ULJ7 1429 aa30.78■■■□□ 2.52
CNIH4-203ENST00000366858 ABCC3O15438 1527 aa30.77■■■□□ 2.52
CNIH4-203ENST00000366858 HSPA2P54652 639 aa30.76■■■□□ 2.51
CNIH4-203ENST00000366858 PRDM15P57071 1507 aaPredicted RBP30.76■■■□□ 2.51
CNIH4-203ENST00000366858 KANK1Q14678 1352 aa30.76■■■□□ 2.51
CNIH4-203ENST00000366858 SETD1BQ9UPS6 1966 aaKnown RBP30.75■■■□□ 2.51
CNIH4-203ENST00000366858 DEPDC5O75140 1603 aa30.73■■■□□ 2.51
CNIH4-203ENST00000366858 PZPP20742 1482 aa30.73■■■□□ 2.51
CNIH4-203ENST00000366858 CEP152O94986 1710 aa30.72■■■□□ 2.51
CNIH4-203ENST00000366858 FBXO31Q5XUX0 539 aaPredicted RBP30.69■■■□□ 2.5
CNIH4-203ENST00000366858 CAMSAP1Q5T5Y3 1602 aa30.67■■■□□ 2.5
CNIH4-203ENST00000366858 MYO3AQ8NEV4 1616 aa30.65■■■□□ 2.5
CNIH4-203ENST00000366858 TNRQ92752 1358 aa30.65■■■□□ 2.5
CNIH4-203ENST00000366858 VWDEQ8N2E2 1590 aa30.59■■■□□ 2.49
CNIH4-203ENST00000366858 CEP170BQ9Y4F5 1589 aaPredicted RBP30.58■■■□□ 2.49
CNIH4-203ENST00000366858 LMTK2Q8IWU2 1503 aa30.57■■■□□ 2.48
CNIH4-203ENST00000366858 ARHGAP31Q2M1Z3 1444 aa30.56■■■□□ 2.48
CNIH4-203ENST00000366858 ZNF142P52746 1687 aaPredicted RBP30.56■■■□□ 2.48
CNIH4-203ENST00000366858 UNC13BO14795 1591 aa30.56■■■□□ 2.48
CNIH4-203ENST00000366858 ERVK-7P63135 1459 aa30.56■■■□□ 2.48
CNIH4-203ENST00000366858 SPATA31D1Q6ZQQ2 1576 aa30.54■■■□□ 2.48
CNIH4-203ENST00000366858 A2ML1A8K2U0 1454 aa30.54■■■□□ 2.48
CNIH4-203ENST00000366858 NLRP1Q9C000 1473 aa30.51■■■□□ 2.48
CNIH4-203ENST00000366858 NAIPQ13075 1403 aa30.51■■■□□ 2.47
CNIH4-203ENST00000366858 EFCAB6Q5THR3 1501 aa30.51■■■□□ 2.47
CNIH4-203ENST00000366858 CFAP65Q6ZU64 1925 aaKnown RBP30.5■■■□□ 2.47
CNIH4-203ENST00000366858 GCC2Q8IWJ2 1684 aa30.49■■■□□ 2.47
CNIH4-203ENST00000366858 NUP155O75694 1391 aa30.49■■■□□ 2.47
CNIH4-203ENST00000366858 HFM1A2PYH4 1435 aa30.47■■■□□ 2.47
CNIH4-203ENST00000366858 TET3O43151 1660 aa30.46■■■□□ 2.47
CNIH4-203ENST00000366858 IQGAP3Q86VI3 1631 aa30.44■■■□□ 2.46
CNIH4-203ENST00000366858 DMRT2Q9Y5R5 561 aa30.44■■■□□ 2.46
CNIH4-203ENST00000366858 STRCQ7RTU9 1775 aa30.43■■■□□ 2.46
CNIH4-203ENST00000366858 UGGT1Q9NYU2 1555 aa30.42■■■□□ 2.46
CNIH4-203ENST00000366858 RPRD2Q5VT52 1461 aaKnown RBP30.41■■■□□ 2.46
CNIH4-203ENST00000366858 PLA2R1Q13018 1463 aa30.4■■■□□ 2.46
CNIH4-203ENST00000366858 THEMISQ8N1K5 641 aaPredicted RBP30.4■■■□□ 2.46
CNIH4-203ENST00000366858 NCKAP5LQ9HCH0 1330 aa30.38■■■□□ 2.45
CNIH4-203ENST00000366858 TRIM52Q96A61 297 aa30.36■■■□□ 2.45
CNIH4-203ENST00000366858 PKD2Q13563 968 aa30.35■■■□□ 2.45
CNIH4-203ENST00000366858 NOS1P29475 1434 aa30.34■■■□□ 2.45
CNIH4-203ENST00000366858 E9PCH4 1651 aa30.33■■■□□ 2.45
CNIH4-203ENST00000366858 SYNMO15061 1565 aa30.33■■■□□ 2.45
CNIH4-203ENST00000366858 STAG3Q9UJ98 1225 aa30.33■■■□□ 2.45
CNIH4-203ENST00000366858 PTPRTO14522 1441 aa30.31■■■□□ 2.44
CNIH4-203ENST00000366858 PIK3C2BO00750 1634 aa30.29■■■□□ 2.44
CNIH4-203ENST00000366858 IDI1Q13907 227 aa30.29■■■□□ 2.44
CNIH4-203ENST00000366858 ANKLE2Q86XL3 938 aa30.29■■■□□ 2.44
CNIH4-203ENST00000366858 SLC52A1Q9NWF4 448 aa30.29■■■□□ 2.44
CNIH4-203ENST00000366858 UBR1Q8IWV7 1749 aa30.29■■■□□ 2.44
CNIH4-203ENST00000366858 POLR1AO95602 1720 aaPredicted RBP30.25■■■□□ 2.43
CNIH4-203ENST00000366858 SETD5Q9C0A6 1442 aa30.22■■■□□ 2.43
CNIH4-203ENST00000366858 SLC4A1APQ9BWU0 796 aaKnown RBP30.21■■■□□ 2.43
CNIH4-203ENST00000366858 ADGRB3O60242 1522 aa30.2■■■□□ 2.42
CNIH4-203ENST00000366858 KDM5AP29375 1690 aaKnown RBP30.2■■■□□ 2.42
CNIH4-203ENST00000366858 NEURL4Q96JN8 1562 aa30.18■■■□□ 2.42
CNIH4-203ENST00000366858 EID1Q9Y6B2 187 aa30.17■■■□□ 2.42
CNIH4-203ENST00000366858 CHGAP10645 457 aaKnown RBP30.16■■■□□ 2.42
CNIH4-203ENST00000366858 SLIT1O75093 1534 aa30.16■■■□□ 2.42
CNIH4-203ENST00000366858 TMEM2Q9UHN6 1383 aa30.15■■■□□ 2.42
CNIH4-203ENST00000366858 TXNDC2Q86VQ3 553 aa30.15■■■□□ 2.42
CNIH4-203ENST00000366858 SPHKAPQ2M3C7 1700 aa30.15■■■□□ 2.42
CNIH4-203ENST00000366858 NPHP4O75161 1426 aaPredicted RBP30.14■■■□□ 2.42
CNIH4-203ENST00000366858 SCAF11Q99590 1463 aaKnown RBP30.14■■■□□ 2.42
CNIH4-203ENST00000366858 ARHGAP23Q9P227 1491 aa30.14■■■□□ 2.42
CNIH4-203ENST00000366858 ACIN1Q9UKV3 1341 aaKnown RBP30.14■■■□□ 2.42
CNIH4-203ENST00000366858 MED14O60244 1454 aa30.12■■■□□ 2.41
CNIH4-203ENST00000366858 RAB3GAP2Q9H2M9 1393 aa30.11■■■□□ 2.41
CNIH4-203ENST00000366858 LTKP29376 864 aa30.1■■■□□ 2.41
CNIH4-203ENST00000366858 IQGAP1P46940 1657 aa30.09■■■□□ 2.41
CNIH4-203ENST00000366858 TMEM131LA2VDJ0 1609 aa30.08■■■□□ 2.41
CNIH4-203ENST00000366858 ZNF335Q9H4Z2 1342 aaPredicted RBP30.06■■■□□ 2.4
CNIH4-203ENST00000366858 MPHOSPH9Q99550 1183 aa30.06■■■□□ 2.4
CNIH4-203ENST00000366858 TRPM2O94759 1503 aa30.06■■■□□ 2.4
CNIH4-203ENST00000366858 CERKQ8TCT0 537 aa30.05■■■□□ 2.4
CNIH4-203ENST00000366858 MYO5BQ9ULV0 1848 aa30.05■■■□□ 2.4
CNIH4-203ENST00000366858 HDGFP51858 240 aaKnown RBP30.03■■■□□ 2.4
CNIH4-203ENST00000366858 FOXD1Q16676 465 aa30.03■■■□□ 2.4
CNIH4-203ENST00000366858 PPP1R15AO75807 674 aaPredicted RBP30.02■■■□□ 2.4
CNIH4-203ENST00000366858 RIMS2Q9UQ26 1411 aa30.01■■■□□ 2.39
CNIH4-203ENST00000366858 CLTCL1P53675 1640 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms