RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-215ENST00000366742 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
MRPL55-215ENST00000366742 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
MRPL55-215ENST00000366742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.93■■□□□ 1.42
MRPL55-215ENST00000366742 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
MRPL55-215ENST00000366742 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
MRPL55-215ENST00000366742 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
MRPL55-215ENST00000366742 ERBINQ96RT1 1412 aa23.9■■□□□ 1.42
MRPL55-215ENST00000366742 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.42
MRPL55-215ENST00000366742 RRBP1Q9P2E9 1410 aaKnown RBP23.88■■□□□ 1.41
MRPL55-215ENST00000366742 SETD1BQ9UPS6 1966 aaKnown RBP23.88■■□□□ 1.41
MRPL55-215ENST00000366742 NPATQ14207 1427 aa23.87■■□□□ 1.41
MRPL55-215ENST00000366742 KDM5DQ9BY66 1539 aa23.87■■□□□ 1.41
MRPL55-215ENST00000366742 MROH1Q8NDA8 1641 aa23.87■■□□□ 1.41
MRPL55-215ENST00000366742 WASHC2CQ9Y4E1 1318 aa23.86■■□□□ 1.41
MRPL55-215ENST00000366742 PREX1Q8TCU6 1659 aa23.84■■□□□ 1.41
MRPL55-215ENST00000366742 HSPA2P54652 639 aa23.83■■□□□ 1.41
MRPL55-215ENST00000366742 ABCC3O15438 1527 aa23.82■■□□□ 1.4
MRPL55-215ENST00000366742 UHRF1BP1Q6BDS2 1440 aa23.82■■□□□ 1.4
MRPL55-215ENST00000366742 ROCK1Q13464 1354 aa23.81■■□□□ 1.4
MRPL55-215ENST00000366742 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
MRPL55-215ENST00000366742 PZPP20742 1482 aa23.79■■□□□ 1.4
MRPL55-215ENST00000366742 ANKRD50Q9ULJ7 1429 aa23.78■■□□□ 1.4
MRPL55-215ENST00000366742 DEPDC5O75140 1603 aa23.78■■□□□ 1.4
MRPL55-215ENST00000366742 ITGAEP38570 1179 aa23.78■■□□□ 1.4
MRPL55-215ENST00000366742 FBXO31Q5XUX0 539 aaPredicted RBP23.77■■□□□ 1.4
MRPL55-215ENST00000366742 ZC3H13Q5T200 1668 aaKnown RBP23.76■■□□□ 1.39
MRPL55-215ENST00000366742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.74■■□□□ 1.39
MRPL55-215ENST00000366742 VWDEQ8N2E2 1590 aa23.72■■□□□ 1.39
MRPL55-215ENST00000366742 CEP152O94986 1710 aa23.72■■□□□ 1.39
MRPL55-215ENST00000366742 KANK1Q14678 1352 aa23.7■■□□□ 1.38
MRPL55-215ENST00000366742 TNRQ92752 1358 aa23.7■■□□□ 1.38
MRPL55-215ENST00000366742 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.38
MRPL55-215ENST00000366742 ARHGAP31Q2M1Z3 1444 aa23.69■■□□□ 1.38
MRPL55-215ENST00000366742 CAMSAP1Q5T5Y3 1602 aa23.69■■□□□ 1.38
MRPL55-215ENST00000366742 LMTK2Q8IWU2 1503 aa23.69■■□□□ 1.38
MRPL55-215ENST00000366742 ERVK-7P63135 1459 aa23.66■■□□□ 1.38
MRPL55-215ENST00000366742 ZNF142P52746 1687 aaPredicted RBP23.66■■□□□ 1.38
MRPL55-215ENST00000366742 SPATA31D1Q6ZQQ2 1576 aa23.65■■□□□ 1.38
MRPL55-215ENST00000366742 CEP170BQ9Y4F5 1589 aaPredicted RBP23.65■■□□□ 1.38
MRPL55-215ENST00000366742 A2ML1A8K2U0 1454 aa23.64■■□□□ 1.38
MRPL55-215ENST00000366742 UNC13BO14795 1591 aa23.63■■□□□ 1.37
MRPL55-215ENST00000366742 STRCQ7RTU9 1775 aa23.61■■□□□ 1.37
MRPL55-215ENST00000366742 NLRP1Q9C000 1473 aa23.61■■□□□ 1.37
MRPL55-215ENST00000366742 NAIPQ13075 1403 aa23.6■■□□□ 1.37
MRPL55-215ENST00000366742 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
MRPL55-215ENST00000366742 CFAP65Q6ZU64 1925 aaKnown RBP23.57■■□□□ 1.36
MRPL55-215ENST00000366742 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
MRPL55-215ENST00000366742 HFM1A2PYH4 1435 aa23.55■■□□□ 1.36
MRPL55-215ENST00000366742 NUP155O75694 1391 aa23.53■■□□□ 1.36
MRPL55-215ENST00000366742 NOS1P29475 1434 aa23.53■■□□□ 1.36
MRPL55-215ENST00000366742 TET3O43151 1660 aa23.53■■□□□ 1.36
MRPL55-215ENST00000366742 IQGAP3Q86VI3 1631 aa23.52■■□□□ 1.36
MRPL55-215ENST00000366742 GCC2Q8IWJ2 1684 aa23.52■■□□□ 1.36
MRPL55-215ENST00000366742 DMRT2Q9Y5R5 561 aa23.52■■□□□ 1.36
MRPL55-215ENST00000366742 NCKAP5LQ9HCH0 1330 aa23.52■■□□□ 1.36
MRPL55-215ENST00000366742 PTPRTO14522 1441 aa23.51■■□□□ 1.35
MRPL55-215ENST00000366742 RPRD2Q5VT52 1461 aaKnown RBP23.51■■□□□ 1.35
MRPL55-215ENST00000366742 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
MRPL55-215ENST00000366742 THEMISQ8N1K5 641 aaPredicted RBP23.5■■□□□ 1.35
MRPL55-215ENST00000366742 PKD2Q13563 968 aa23.49■■□□□ 1.35
MRPL55-215ENST00000366742 SYNMO15061 1565 aa23.48■■□□□ 1.35
MRPL55-215ENST00000366742 IDI1Q13907 227 aa23.46■■□□□ 1.35
MRPL55-215ENST00000366742 E9PCH4 1651 aa23.44■■□□□ 1.34
MRPL55-215ENST00000366742 UBR1Q8IWV7 1749 aa23.43■■□□□ 1.34
MRPL55-215ENST00000366742 SLC52A1Q9NWF4 448 aa23.42■■□□□ 1.34
MRPL55-215ENST00000366742 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
MRPL55-215ENST00000366742 ANKLE2Q86XL3 938 aa23.41■■□□□ 1.34
MRPL55-215ENST00000366742 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
MRPL55-215ENST00000366742 ARHGAP23Q9P227 1491 aa23.38■■□□□ 1.33
MRPL55-215ENST00000366742 SLIT1O75093 1534 aa23.37■■□□□ 1.33
MRPL55-215ENST00000366742 MED14O60244 1454 aa23.36■■□□□ 1.33
MRPL55-215ENST00000366742 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
MRPL55-215ENST00000366742 KDM5AP29375 1690 aaKnown RBP23.36■■□□□ 1.33
MRPL55-215ENST00000366742 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
MRPL55-215ENST00000366742 ADGRB3O60242 1522 aa23.34■■□□□ 1.33
MRPL55-215ENST00000366742 STAG3Q9UJ98 1225 aa23.34■■□□□ 1.33
MRPL55-215ENST00000366742 TMEM2Q9UHN6 1383 aa23.34■■□□□ 1.33
MRPL55-215ENST00000366742 LTKP29376 864 aa23.33■■□□□ 1.33
MRPL55-215ENST00000366742 NPHP4O75161 1426 aaPredicted RBP23.32■■□□□ 1.32
MRPL55-215ENST00000366742 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
MRPL55-215ENST00000366742 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
MRPL55-215ENST00000366742 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
MRPL55-215ENST00000366742 TXNDC2Q86VQ3 553 aa23.3■■□□□ 1.32
MRPL55-215ENST00000366742 CERKQ8TCT0 537 aa23.29■■□□□ 1.32
MRPL55-215ENST00000366742 SLC4A1APQ9BWU0 796 aaKnown RBP23.29■■□□□ 1.32
MRPL55-215ENST00000366742 TMEM131LA2VDJ0 1609 aa23.28■■□□□ 1.32
MRPL55-215ENST00000366742 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
MRPL55-215ENST00000366742 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
MRPL55-215ENST00000366742 SPHKAPQ2M3C7 1700 aa23.27■■□□□ 1.32
MRPL55-215ENST00000366742 IQGAP1P46940 1657 aa23.25■■□□□ 1.31
MRPL55-215ENST00000366742 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
MRPL55-215ENST00000366742 ZFYVE9O95405 1425 aa23.24■■□□□ 1.31
MRPL55-215ENST00000366742 TRPM2O94759 1503 aa23.23■■□□□ 1.31
MRPL55-215ENST00000366742 MYO5BQ9ULV0 1848 aa23.22■■□□□ 1.31
MRPL55-215ENST00000366742 CHGAP10645 457 aaKnown RBP23.22■■□□□ 1.31
MRPL55-215ENST00000366742 MPHOSPH9Q99550 1183 aa23.22■■□□□ 1.31
MRPL55-215ENST00000366742 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
MRPL55-215ENST00000366742 RIMS2Q9UQ26 1411 aa23.2■■□□□ 1.3
MRPL55-215ENST00000366742 ILDR1Q86SU0 546 aaPredicted RBP23.2■■□□□ 1.3
MRPL55-215ENST00000366742 FOXD1Q16676 465 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms