RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 MROH2AA6NES4 1674 aa25.96■■□□□ 1.75
CKLF-204ENST00000362093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.75
CKLF-204ENST00000362093 CLTCQ00610 1675 aaKnown RBP25.94■■□□□ 1.74
CKLF-204ENST00000362093 SETD1BQ9UPS6 1966 aaKnown RBP25.94■■□□□ 1.74
CKLF-204ENST00000362093 WASHC2CQ9Y4E1 1318 aa25.93■■□□□ 1.74
CKLF-204ENST00000362093 ADGRL2O95490 1459 aa25.93■■□□□ 1.74
CKLF-204ENST00000362093 PTPRKQ15262 1439 aa25.93■■□□□ 1.74
CKLF-204ENST00000362093 EIF2AK4Q9P2K8 1649 aaKnown RBP25.92■■□□□ 1.74
CKLF-204ENST00000362093 ERBINQ96RT1 1412 aa25.91■■□□□ 1.74
CKLF-204ENST00000362093 FAM135AQ9P2D6 1515 aa25.9■■□□□ 1.74
CKLF-204ENST00000362093 NPATQ14207 1427 aa25.89■■□□□ 1.74
CKLF-204ENST00000362093 RNF17Q9BXT8 1623 aaKnown RBP25.89■■□□□ 1.74
CKLF-204ENST00000362093 HSPA2P54652 639 aa25.88■■□□□ 1.73
CKLF-204ENST00000362093 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
CKLF-204ENST00000362093 RRBP1Q9P2E9 1410 aaKnown RBP25.88■■□□□ 1.73
CKLF-204ENST00000362093 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
CKLF-204ENST00000362093 PREX1Q8TCU6 1659 aa25.85■■□□□ 1.73
CKLF-204ENST00000362093 MROH1Q8NDA8 1641 aa25.85■■□□□ 1.73
CKLF-204ENST00000362093 ROCK1Q13464 1354 aa25.83■■□□□ 1.73
CKLF-204ENST00000362093 ITGAEP38570 1179 aa25.83■■□□□ 1.73
CKLF-204ENST00000362093 FBXO31Q5XUX0 539 aaPredicted RBP25.82■■□□□ 1.72
CKLF-204ENST00000362093 FBXO41Q8TF61 875 aa25.82■■□□□ 1.72
CKLF-204ENST00000362093 PZPP20742 1482 aa25.8■■□□□ 1.72
CKLF-204ENST00000362093 ABCC3O15438 1527 aa25.8■■□□□ 1.72
CKLF-204ENST00000362093 ANKRD50Q9ULJ7 1429 aa25.8■■□□□ 1.72
CKLF-204ENST00000362093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.79■■□□□ 1.72
CKLF-204ENST00000362093 PRDM15P57071 1507 aaPredicted RBP25.77■■□□□ 1.72
CKLF-204ENST00000362093 DEPDC5O75140 1603 aa25.76■■□□□ 1.71
CKLF-204ENST00000362093 ZC3H13Q5T200 1668 aaKnown RBP25.75■■□□□ 1.71
CKLF-204ENST00000362093 KANK1Q14678 1352 aa25.73■■□□□ 1.71
CKLF-204ENST00000362093 TNRQ92752 1358 aa25.71■■□□□ 1.71
CKLF-204ENST00000362093 CEP152O94986 1710 aa25.71■■□□□ 1.71
CKLF-204ENST00000362093 VWDEQ8N2E2 1590 aa25.7■■□□□ 1.71
CKLF-204ENST00000362093 ARHGAP31Q2M1Z3 1444 aa25.7■■□□□ 1.7
CKLF-204ENST00000362093 CAMSAP1Q5T5Y3 1602 aa25.67■■□□□ 1.7
CKLF-204ENST00000362093 MYO3AQ8NEV4 1616 aa25.67■■□□□ 1.7
CKLF-204ENST00000362093 LMTK2Q8IWU2 1503 aa25.67■■□□□ 1.7
CKLF-204ENST00000362093 SPATA31D1Q6ZQQ2 1576 aa25.65■■□□□ 1.7
CKLF-204ENST00000362093 A2ML1A8K2U0 1454 aa25.65■■□□□ 1.7
CKLF-204ENST00000362093 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
CKLF-204ENST00000362093 CEP170BQ9Y4F5 1589 aaPredicted RBP25.64■■□□□ 1.69
CKLF-204ENST00000362093 ZNF142P52746 1687 aaPredicted RBP25.63■■□□□ 1.69
CKLF-204ENST00000362093 STRCQ7RTU9 1775 aa25.61■■□□□ 1.69
CKLF-204ENST00000362093 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
CKLF-204ENST00000362093 DMRT2Q9Y5R5 561 aa25.6■■□□□ 1.69
CKLF-204ENST00000362093 UNC13BO14795 1591 aa25.58■■□□□ 1.69
CKLF-204ENST00000362093 CFAP65Q6ZU64 1925 aaKnown RBP25.58■■□□□ 1.69
CKLF-204ENST00000362093 NAIPQ13075 1403 aa25.57■■□□□ 1.68
CKLF-204ENST00000362093 PLA2R1Q13018 1463 aa25.56■■□□□ 1.68
CKLF-204ENST00000362093 PKD2Q13563 968 aa25.55■■□□□ 1.68
CKLF-204ENST00000362093 THEMISQ8N1K5 641 aaPredicted RBP25.55■■□□□ 1.68
CKLF-204ENST00000362093 NCKAP5LQ9HCH0 1330 aa25.55■■□□□ 1.68
CKLF-204ENST00000362093 NUP155O75694 1391 aa25.55■■□□□ 1.68
CKLF-204ENST00000362093 EFCAB6Q5THR3 1501 aa25.54■■□□□ 1.68
CKLF-204ENST00000362093 PTPRTO14522 1441 aa25.54■■□□□ 1.68
CKLF-204ENST00000362093 HFM1A2PYH4 1435 aa25.53■■□□□ 1.68
CKLF-204ENST00000362093 NOS1P29475 1434 aa25.52■■□□□ 1.68
CKLF-204ENST00000362093 UGGT1Q9NYU2 1555 aa25.52■■□□□ 1.68
CKLF-204ENST00000362093 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.67
CKLF-204ENST00000362093 TET3O43151 1660 aa25.49■■□□□ 1.67
CKLF-204ENST00000362093 IDI1Q13907 227 aa25.49■■□□□ 1.67
CKLF-204ENST00000362093 ILDR2Q71H61 639 aa25.49■■□□□ 1.67
CKLF-204ENST00000362093 IQGAP3Q86VI3 1631 aa25.48■■□□□ 1.67
CKLF-204ENST00000362093 SOCS7O14512 581 aa25.46■■□□□ 1.67
CKLF-204ENST00000362093 ANKLE2Q86XL3 938 aa25.46■■□□□ 1.67
CKLF-204ENST00000362093 GCC2Q8IWJ2 1684 aa25.45■■□□□ 1.67
CKLF-204ENST00000362093 SLC52A1Q9NWF4 448 aa25.45■■□□□ 1.66
CKLF-204ENST00000362093 SYNMO15061 1565 aa25.44■■□□□ 1.66
CKLF-204ENST00000362093 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
CKLF-204ENST00000362093 E9PCH4 1651 aa25.4■■□□□ 1.66
CKLF-204ENST00000362093 PIK3C2BO00750 1634 aa25.38■■□□□ 1.65
CKLF-204ENST00000362093 TRIM52Q96A61 297 aa25.38■■□□□ 1.65
CKLF-204ENST00000362093 STAG3Q9UJ98 1225 aa25.38■■□□□ 1.65
CKLF-204ENST00000362093 NEURL4Q96JN8 1562 aa25.35■■□□□ 1.65
CKLF-204ENST00000362093 ARHGAP23Q9P227 1491 aa25.35■■□□□ 1.65
CKLF-204ENST00000362093 MED14O60244 1454 aa25.34■■□□□ 1.65
CKLF-204ENST00000362093 SLIT1O75093 1534 aa25.34■■□□□ 1.65
CKLF-204ENST00000362093 LTKP29376 864 aa25.34■■□□□ 1.65
CKLF-204ENST00000362093 TXNDC2Q86VQ3 553 aa25.34■■□□□ 1.65
CKLF-204ENST00000362093 TMEM2Q9UHN6 1383 aa25.33■■□□□ 1.65
CKLF-204ENST00000362093 CERKQ8TCT0 537 aa25.33■■□□□ 1.65
CKLF-204ENST00000362093 KDM5AP29375 1690 aaKnown RBP25.32■■□□□ 1.64
CKLF-204ENST00000362093 POLR1AO95602 1720 aaPredicted RBP25.32■■□□□ 1.64
CKLF-204ENST00000362093 NPHP4O75161 1426 aaPredicted RBP25.31■■□□□ 1.64
CKLF-204ENST00000362093 EID1Q9Y6B2 187 aa25.3■■□□□ 1.64
CKLF-204ENST00000362093 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
CKLF-204ENST00000362093 SCAF11Q99590 1463 aaKnown RBP25.29■■□□□ 1.64
CKLF-204ENST00000362093 SLC4A1APQ9BWU0 796 aaKnown RBP25.29■■□□□ 1.64
CKLF-204ENST00000362093 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
CKLF-204ENST00000362093 ADGRB3O60242 1522 aa25.28■■□□□ 1.64
CKLF-204ENST00000362093 LTBP4Q8N2S1 1624 aa25.28■■□□□ 1.64
CKLF-204ENST00000362093 ACIN1Q9UKV3 1341 aaKnown RBP25.26■■□□□ 1.63
CKLF-204ENST00000362093 TMEM131LA2VDJ0 1609 aa25.24■■□□□ 1.63
CKLF-204ENST00000362093 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
CKLF-204ENST00000362093 MPHOSPH9Q99550 1183 aa25.22■■□□□ 1.63
CKLF-204ENST00000362093 IQGAP1P46940 1657 aa25.22■■□□□ 1.63
CKLF-204ENST00000362093 SPHKAPQ2M3C7 1700 aa25.21■■□□□ 1.63
CKLF-204ENST00000362093 ZFYVE9O95405 1425 aa25.2■■□□□ 1.62
CKLF-204ENST00000362093 RAB3GAP2Q9H2M9 1393 aa25.19■■□□□ 1.62
CKLF-204ENST00000362093 HDGFP51858 240 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms