RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
CMTM3-201ENST00000361909 NEO1Q92859 1461 aa26.03■■□□□ 1.76
CMTM3-201ENST00000361909 AFAP1Q8N556 730 aa26.02■■□□□ 1.76
CMTM3-201ENST00000361909 ERBINQ96RT1 1412 aa26.02■■□□□ 1.76
CMTM3-201ENST00000361909 ZFYVE16Q7Z3T8 1539 aa26.01■■□□□ 1.76
CMTM3-201ENST00000361909 DEKP35659 375 aaKnown RBP26.01■■□□□ 1.75
CMTM3-201ENST00000361909 CNTLNQ9NXG0 1405 aa26.01■■□□□ 1.75
CMTM3-201ENST00000361909 INO80Q9ULG1 1556 aaPredicted RBP26■■□□□ 1.75
CMTM3-201ENST00000361909 ZNF518AQ6AHZ1 1483 aa25.98■■□□□ 1.75
CMTM3-201ENST00000361909 NUP155O75694 1391 aa25.98■■□□□ 1.75
CMTM3-201ENST00000361909 ANKRD30BQ9BXX2 1392 aa25.97■■□□□ 1.75
CMTM3-201ENST00000361909 ATP7AQ04656 1500 aa25.97■■□□□ 1.75
CMTM3-201ENST00000361909 ZBED9Q6R2W3 1325 aa25.96■■□□□ 1.75
CMTM3-201ENST00000361909 UNC13BO14795 1591 aa25.96■■□□□ 1.75
CMTM3-201ENST00000361909 DIP2BQ9P265 1576 aa25.96■■□□□ 1.75
CMTM3-201ENST00000361909 NOP58Q9Y2X3 529 aaKnown RBP25.95■■□□□ 1.74
CMTM3-201ENST00000361909 IRX6P78412 446 aaPredicted RBP25.93■■□□□ 1.74
CMTM3-201ENST00000361909 POGZQ7Z3K3 1410 aa25.92■■□□□ 1.74
CMTM3-201ENST00000361909 KDM5CP41229 1560 aa25.92■■□□□ 1.74
CMTM3-201ENST00000361909 WASHC2AQ641Q2 1341 aa25.91■■□□□ 1.74
CMTM3-201ENST00000361909 POLR1AO95602 1720 aaPredicted RBP25.91■■□□□ 1.74
CMTM3-201ENST00000361909 MAGI2Q86UL8 1455 aa25.89■■□□□ 1.74
CMTM3-201ENST00000361909 FAM69CQ0P6D2 419 aa25.89■■□□□ 1.74
CMTM3-201ENST00000361909 PKD2Q13563 968 aa25.88■■□□□ 1.73
CMTM3-201ENST00000361909 FAM135AQ9P2D6 1515 aa25.88■■□□□ 1.73
CMTM3-201ENST00000361909 KIDINS220Q9ULH0 1771 aa25.88■■□□□ 1.73
CMTM3-201ENST00000361909 FOXD1Q16676 465 aa25.88■■□□□ 1.73
CMTM3-201ENST00000361909 MLH3Q9UHC1 1453 aa25.87■■□□□ 1.73
CMTM3-201ENST00000361909 IQGAP3Q86VI3 1631 aa25.86■■□□□ 1.73
CMTM3-201ENST00000361909 RPRD2Q5VT52 1461 aaKnown RBP25.86■■□□□ 1.73
CMTM3-201ENST00000361909 DHX29Q7Z478 1369 aaKnown RBP25.84■■□□□ 1.73
CMTM3-201ENST00000361909 EIF2AK4Q9P2K8 1649 aaKnown RBP25.83■■□□□ 1.73
CMTM3-201ENST00000361909 EIF4G2P78344 907 aaKnown RBP eCLIP25.83■■□□□ 1.73
CMTM3-201ENST00000361909 HSPA5P11021 654 aaKnown RBP25.82■■□□□ 1.72
CMTM3-201ENST00000361909 HECW2Q9P2P5 1572 aa25.82■■□□□ 1.72
CMTM3-201ENST00000361909 DEPDC5O75140 1603 aa25.8■■□□□ 1.72
CMTM3-201ENST00000361909 TEX14Q8IWB6 1497 aa25.8■■□□□ 1.72
CMTM3-201ENST00000361909 PRKRIP1Q9H875 184 aaPredicted RBP25.78■■□□□ 1.72
CMTM3-201ENST00000361909 RICTORQ6R327 1708 aa25.78■■□□□ 1.72
CMTM3-201ENST00000361909 SMG6Q86US8 1419 aaKnown RBP25.77■■□□□ 1.72
CMTM3-201ENST00000361909 PPRC1Q5VV67 1664 aaKnown RBP25.77■■□□□ 1.72
CMTM3-201ENST00000361909 B4GALNT3Q6L9W6 998 aa25.76■■□□□ 1.71
CMTM3-201ENST00000361909 CCDC7Q96M83 1385 aa25.76■■□□□ 1.71
CMTM3-201ENST00000361909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.75■■□□□ 1.71
CMTM3-201ENST00000361909 KIF13AQ9H1H9 1805 aa25.75■■□□□ 1.71
CMTM3-201ENST00000361909 A2MP01023 1474 aa25.74■■□□□ 1.71
CMTM3-201ENST00000361909 ANP32AP39687 249 aaKnown RBP25.73■■□□□ 1.71
CMTM3-201ENST00000361909 RAPGEF3O95398 923 aa25.72■■□□□ 1.71
CMTM3-201ENST00000361909 TSPOAP1O95153 1857 aa25.71■■□□□ 1.71
CMTM3-201ENST00000361909 PRKCSHP14314 528 aaPredicted RBP25.71■■□□□ 1.71
CMTM3-201ENST00000361909 VWDEQ8N2E2 1590 aa25.71■■□□□ 1.71
CMTM3-201ENST00000361909 MRS2Q9HD23 443 aa25.71■■□□□ 1.71
CMTM3-201ENST00000361909 RNF123Q5XPI4 1314 aa25.7■■□□□ 1.7
CMTM3-201ENST00000361909 IPO9Q96P70 1041 aaKnown RBP25.7■■□□□ 1.7
CMTM3-201ENST00000361909 PRDM15P57071 1507 aaPredicted RBP25.7■■□□□ 1.7
CMTM3-201ENST00000361909 KANK1Q14678 1352 aa25.69■■□□□ 1.7
CMTM3-201ENST00000361909 L3MBTL2Q969R5 705 aa25.69■■□□□ 1.7
CMTM3-201ENST00000361909 BCORL1Q5H9F3 1711 aa25.69■■□□□ 1.7
CMTM3-201ENST00000361909 KIF3BO15066 747 aa25.69■■□□□ 1.7
CMTM3-201ENST00000361909 RTL5Q5HYW3 569 aaPredicted RBP25.69■■□□□ 1.7
CMTM3-201ENST00000361909 ATP10AO60312 1499 aa25.69■■□□□ 1.7
CMTM3-201ENST00000361909 ABCA6Q8N139 1617 aa25.68■■□□□ 1.7
CMTM3-201ENST00000361909 ZMYM4Q5VZL5 1548 aa25.68■■□□□ 1.7
CMTM3-201ENST00000361909 FRMPD1Q5SYB0 1578 aa25.67■■□□□ 1.7
CMTM3-201ENST00000361909 RNF17Q9BXT8 1623 aaKnown RBP25.66■■□□□ 1.7
CMTM3-201ENST00000361909 MROH1Q8NDA8 1641 aa25.65■■□□□ 1.7
CMTM3-201ENST00000361909 TET3O43151 1660 aa25.64■■□□□ 1.7
CMTM3-201ENST00000361909 DIP2CQ9Y2E4 1556 aa25.64■■□□□ 1.7
CMTM3-201ENST00000361909 CCDC184Q52MB2 194 aa25.63■■□□□ 1.69
CMTM3-201ENST00000361909 PAK3O75914 559 aaPredicted RBP25.63■■□□□ 1.69
CMTM3-201ENST00000361909 FAM9BQ8IZU0 186 aa25.63■■□□□ 1.69
CMTM3-201ENST00000361909 PLA2R1Q13018 1463 aa25.61■■□□□ 1.69
CMTM3-201ENST00000361909 NBR1Q14596 966 aa25.61■■□□□ 1.69
CMTM3-201ENST00000361909 CCDC144AA2RUR9 1427 aa25.6■■□□□ 1.69
CMTM3-201ENST00000361909 E9PCH4 1651 aa25.6■■□□□ 1.69
CMTM3-201ENST00000361909 ZBTB47Q9UFB7 747 aaPredicted RBP25.59■■□□□ 1.69
CMTM3-201ENST00000361909 NUDCQ9Y266 331 aa25.59■■□□□ 1.69
CMTM3-201ENST00000361909 LMTK2Q8IWU2 1503 aa25.59■■□□□ 1.69
CMTM3-201ENST00000361909 SPATA31E1Q6ZUB1 1445 aa25.56■■□□□ 1.68
CMTM3-201ENST00000361909 PTPRTO14522 1441 aa25.55■■□□□ 1.68
CMTM3-201ENST00000361909 YEATS2Q9ULM3 1422 aa25.55■■□□□ 1.68
CMTM3-201ENST00000361909 CCDC136Q96JN2 1154 aa25.55■■□□□ 1.68
CMTM3-201ENST00000361909 USP35Q9P2H5 1018 aa25.52■■□□□ 1.68
CMTM3-201ENST00000361909 TRPM2O94759 1503 aa25.52■■□□□ 1.68
CMTM3-201ENST00000361909 SPHKAPQ2M3C7 1700 aa25.51■■□□□ 1.67
CMTM3-201ENST00000361909 REREQ9P2R6 1566 aa25.51■■□□□ 1.67
CMTM3-201ENST00000361909 EFCAB6Q5THR3 1501 aa25.51■■□□□ 1.67
CMTM3-201ENST00000361909 UHRF1BP1Q6BDS2 1440 aa25.5■■□□□ 1.67
CMTM3-201ENST00000361909 KIF7Q2M1P5 1343 aa25.49■■□□□ 1.67
CMTM3-201ENST00000361909 C11orf95C9JLR9 678 aaPredicted RBP25.48■■□□□ 1.67
CMTM3-201ENST00000361909 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
CMTM3-201ENST00000361909 CEP152O94986 1710 aa25.47■■□□□ 1.67
CMTM3-201ENST00000361909 GGT6Q6P531 493 aa25.46■■□□□ 1.67
CMTM3-201ENST00000361909 COL17A1Q9UMD9 1497 aaPredicted RBP25.46■■□□□ 1.67
CMTM3-201ENST00000361909 ARID4BQ4LE39 1312 aaPredicted RBP25.45■■□□□ 1.66
CMTM3-201ENST00000361909 DNAJC5Q9H3Z4 198 aa25.44■■□□□ 1.66
CMTM3-201ENST00000361909 ABCC3O15438 1527 aa25.43■■□□□ 1.66
CMTM3-201ENST00000361909 AGLP35573 1532 aa25.43■■□□□ 1.66
CMTM3-201ENST00000361909 ZC3H13Q5T200 1668 aaKnown RBP25.43■■□□□ 1.66
CMTM3-201ENST00000361909 WASHC2CQ9Y4E1 1318 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms