RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 CCDC144AA2RUR9 1427 aa17.49■□□□□ 0.39
SGMS1-202ENST00000361781 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
SGMS1-202ENST00000361781 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
SGMS1-202ENST00000361781 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
SGMS1-202ENST00000361781 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
SGMS1-202ENST00000361781 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
SGMS1-202ENST00000361781 BCAR3O75815 825 aa17.47■□□□□ 0.39
SGMS1-202ENST00000361781 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-202ENST00000361781 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
SGMS1-202ENST00000361781 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-202ENST00000361781 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-202ENST00000361781 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
SGMS1-202ENST00000361781 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
SGMS1-202ENST00000361781 TOPBP1Q92547 1522 aa17.45■□□□□ 0.38
SGMS1-202ENST00000361781 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
SGMS1-202ENST00000361781 EFCAB5A4FU69 1503 aa17.44■□□□□ 0.38
SGMS1-202ENST00000361781 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
SGMS1-202ENST00000361781 ITPRIPQ8IWB1 547 aa17.43■□□□□ 0.38
SGMS1-202ENST00000361781 DAPK1P53355 1430 aa17.42■□□□□ 0.38
SGMS1-202ENST00000361781 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
SGMS1-202ENST00000361781 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
SGMS1-202ENST00000361781 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
SGMS1-202ENST00000361781 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
SGMS1-202ENST00000361781 STK26Q9P289 416 aa17.41■□□□□ 0.38
SGMS1-202ENST00000361781 TRAK1Q9UPV9 953 aa17.41■□□□□ 0.38
SGMS1-202ENST00000361781 EHBP1L1Q8N3D4 1523 aa17.41■□□□□ 0.38
SGMS1-202ENST00000361781 APBB1O00213 710 aa17.4■□□□□ 0.38
SGMS1-202ENST00000361781 KIAA1107Q9UPP5 1409 aa17.4■□□□□ 0.38
SGMS1-202ENST00000361781 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
SGMS1-202ENST00000361781 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.37
SGMS1-202ENST00000361781 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
SGMS1-202ENST00000361781 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
SGMS1-202ENST00000361781 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
SGMS1-202ENST00000361781 ARID3AQ99856 593 aa17.38■□□□□ 0.37
SGMS1-202ENST00000361781 SMC4Q9NTJ3 1288 aa17.38■□□□□ 0.37
SGMS1-202ENST00000361781 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
SGMS1-202ENST00000361781 KIF3BO15066 747 aa17.37■□□□□ 0.37
SGMS1-202ENST00000361781 RWDD1Q9H446 243 aaPredicted RBP17.37■□□□□ 0.37
SGMS1-202ENST00000361781 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
SGMS1-202ENST00000361781 GOLGA6L3A6NEY3 463 aa17.37■□□□□ 0.37
SGMS1-202ENST00000361781 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
SGMS1-202ENST00000361781 GGT6Q6P531 493 aa17.37■□□□□ 0.37
SGMS1-202ENST00000361781 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
SGMS1-202ENST00000361781 ABCC5O15440 1437 aa17.36■□□□□ 0.37
SGMS1-202ENST00000361781 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
SGMS1-202ENST00000361781 MIA2Q96PC5 1412 aa17.36■□□□□ 0.37
SGMS1-202ENST00000361781 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
SGMS1-202ENST00000361781 E9PSI1 815 aa17.34■□□□□ 0.37
SGMS1-202ENST00000361781 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
SGMS1-202ENST00000361781 GOLGA6L22H0YM25 854 aa17.33■□□□□ 0.37
SGMS1-202ENST00000361781 ELL2O00472 640 aaPredicted RBP17.33■□□□□ 0.37
SGMS1-202ENST00000361781 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.36
SGMS1-202ENST00000361781 POGKQ9P215 609 aa17.32■□□□□ 0.36
SGMS1-202ENST00000361781 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
SGMS1-202ENST00000361781 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
SGMS1-202ENST00000361781 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
SGMS1-202ENST00000361781 DHX29Q7Z478 1369 aaKnown RBP17.29■□□□□ 0.36
SGMS1-202ENST00000361781 SOX12O15370 315 aa17.28■□□□□ 0.36
SGMS1-202ENST00000361781 EFCAB2Q5VUJ9 269 aa17.28■□□□□ 0.36
SGMS1-202ENST00000361781 CFAP70Q5T0N1 1121 aa17.27■□□□□ 0.36
SGMS1-202ENST00000361781 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
SGMS1-202ENST00000361781 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
SGMS1-202ENST00000361781 C9orf84Q5VXU9 1444 aa17.24■□□□□ 0.35
SGMS1-202ENST00000361781 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
SGMS1-202ENST00000361781 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
SGMS1-202ENST00000361781 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
SGMS1-202ENST00000361781 PLCB2Q00722 1185 aa17.24■□□□□ 0.35
SGMS1-202ENST00000361781 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
SGMS1-202ENST00000361781 PTMAP06454 111 aaKnown RBP17.23■□□□□ 0.35
SGMS1-202ENST00000361781 LNPKQ9C0E8 428 aa17.23■□□□□ 0.35
SGMS1-202ENST00000361781 PDZRN3Q9UPQ7 1066 aa17.23■□□□□ 0.35
SGMS1-202ENST00000361781 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
SGMS1-202ENST00000361781 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
SGMS1-202ENST00000361781 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
SGMS1-202ENST00000361781 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
SGMS1-202ENST00000361781 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
SGMS1-202ENST00000361781 DNTTIP2Q5QJE6 756 aaKnown RBP17.21■□□□□ 0.35
SGMS1-202ENST00000361781 AFAP1Q8N556 730 aa17.21■□□□□ 0.35
SGMS1-202ENST00000361781 RSPH6AQ9H0K4 717 aa17.21■□□□□ 0.35
SGMS1-202ENST00000361781 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
SGMS1-202ENST00000361781 RSPH4AQ5TD94 716 aa17.21■□□□□ 0.35
SGMS1-202ENST00000361781 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
SGMS1-202ENST00000361781 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
SGMS1-202ENST00000361781 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.34
SGMS1-202ENST00000361781 IGHDP01880 384 aa17.2■□□□□ 0.34
SGMS1-202ENST00000361781 MTHFSP49914 203 aa17.2■□□□□ 0.34
SGMS1-202ENST00000361781 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
SGMS1-202ENST00000361781 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
SGMS1-202ENST00000361781 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
SGMS1-202ENST00000361781 C22orf23Q9BZE7 217 aa17.2■□□□□ 0.34
SGMS1-202ENST00000361781 HECW1Q76N89 1606 aa17.19■□□□□ 0.34
SGMS1-202ENST00000361781 DISP3Q9P2K9 1392 aa17.19■□□□□ 0.34
SGMS1-202ENST00000361781 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
SGMS1-202ENST00000361781 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
SGMS1-202ENST00000361781 PTPRGP23470 1445 aa17.19■□□□□ 0.34
SGMS1-202ENST00000361781 KANK1Q14678 1352 aa17.19■□□□□ 0.34
SGMS1-202ENST00000361781 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
SGMS1-202ENST00000361781 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
SGMS1-202ENST00000361781 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
SGMS1-202ENST00000361781 GBP4Q96PP9 640 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms