RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
CNKSR1-201ENST00000361530 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
CNKSR1-201ENST00000361530 NUDCQ9Y266 331 aa21.08■□□□□ 0.97
CNKSR1-201ENST00000361530 FANCIQ9NVI1 1328 aa21.07■□□□□ 0.96
CNKSR1-201ENST00000361530 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
CNKSR1-201ENST00000361530 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
CNKSR1-201ENST00000361530 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
CNKSR1-201ENST00000361530 RSPH4AQ5TD94 716 aa21.03■□□□□ 0.96
CNKSR1-201ENST00000361530 RNF123Q5XPI4 1314 aa21.02■□□□□ 0.96
CNKSR1-201ENST00000361530 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
CNKSR1-201ENST00000361530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.95
CNKSR1-201ENST00000361530 SYCP2Q9BX26 1530 aa21.01■□□□□ 0.95
CNKSR1-201ENST00000361530 PLA2R1Q13018 1463 aa21.01■□□□□ 0.95
CNKSR1-201ENST00000361530 CCDC144AA2RUR9 1427 aa21■□□□□ 0.95
CNKSR1-201ENST00000361530 PRAG1Q86YV5 1406 aa21■□□□□ 0.95
CNKSR1-201ENST00000361530 MYBBP1AQ9BQG0 1328 aaKnown RBP21■□□□□ 0.95
CNKSR1-201ENST00000361530 LRPPRCP42704 1394 aaKnown RBP20.99■□□□□ 0.95
CNKSR1-201ENST00000361530 RALBP1Q15311 655 aa20.98■□□□□ 0.95
CNKSR1-201ENST00000361530 TTC37Q6PGP7 1564 aa20.98■□□□□ 0.95
CNKSR1-201ENST00000361530 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
CNKSR1-201ENST00000361530 ARHGAP5Q13017 1502 aa20.97■□□□□ 0.95
CNKSR1-201ENST00000361530 E9PCH4 1651 aa20.96■□□□□ 0.95
CNKSR1-201ENST00000361530 TRPM1Q7Z4N2 1603 aa20.96■□□□□ 0.95
CNKSR1-201ENST00000361530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.95■□□□□ 0.94
CNKSR1-201ENST00000361530 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
CNKSR1-201ENST00000361530 PLEKHH2Q8IVE3 1493 aa20.94■□□□□ 0.94
CNKSR1-201ENST00000361530 A2MP01023 1474 aa20.93■□□□□ 0.94
CNKSR1-201ENST00000361530 UNC13BO14795 1591 aa20.92■□□□□ 0.94
CNKSR1-201ENST00000361530 PER1O15534 1290 aaPredicted RBP20.92■□□□□ 0.94
CNKSR1-201ENST00000361530 MAST1Q9Y2H9 1570 aa20.92■□□□□ 0.94
CNKSR1-201ENST00000361530 CHD1O14646 1710 aa20.91■□□□□ 0.94
CNKSR1-201ENST00000361530 GPRASP1Q5JY77 1395 aa20.9■□□□□ 0.94
CNKSR1-201ENST00000361530 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
CNKSR1-201ENST00000361530 ERCC6L2Q5T890 1561 aa20.9■□□□□ 0.94
CNKSR1-201ENST00000361530 PARD3Q8TEW0 1356 aa20.89■□□□□ 0.94
CNKSR1-201ENST00000361530 TESK2Q96S53 571 aa20.89■□□□□ 0.93
CNKSR1-201ENST00000361530 NLRP13Q86W25 1043 aa20.88■□□□□ 0.93
CNKSR1-201ENST00000361530 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
CNKSR1-201ENST00000361530 DISP3Q9P2K9 1392 aa20.87■□□□□ 0.93
CNKSR1-201ENST00000361530 SHROOM2Q13796 1616 aa20.86■□□□□ 0.93
CNKSR1-201ENST00000361530 IQGAP3Q86VI3 1631 aa20.85■□□□□ 0.93
CNKSR1-201ENST00000361530 PLXNC1O60486 1568 aa20.85■□□□□ 0.93
CNKSR1-201ENST00000361530 ABCC2Q92887 1545 aa20.84■□□□□ 0.93
CNKSR1-201ENST00000361530 COL17A1Q9UMD9 1497 aaPredicted RBP20.84■□□□□ 0.93
CNKSR1-201ENST00000361530 MYO5CQ9NQX4 1742 aa20.83■□□□□ 0.93
CNKSR1-201ENST00000361530 PRDM15P57071 1507 aaPredicted RBP20.83■□□□□ 0.93
CNKSR1-201ENST00000361530 CC2D1BQ5T0F9 858 aaKnown RBP20.83■□□□□ 0.93
CNKSR1-201ENST00000361530 PANK3Q9H999 370 aa20.82■□□□□ 0.92
CNKSR1-201ENST00000361530 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
CNKSR1-201ENST00000361530 ERBINQ96RT1 1412 aa20.8■□□□□ 0.92
CNKSR1-201ENST00000361530 ATP10AO60312 1499 aa20.8■□□□□ 0.92
CNKSR1-201ENST00000361530 RRP1P56182 461 aaKnown RBP20.8■□□□□ 0.92
CNKSR1-201ENST00000361530 MAGI2Q86UL8 1455 aa20.79■□□□□ 0.92
CNKSR1-201ENST00000361530 LAMC1P11047 1609 aa20.79■□□□□ 0.92
CNKSR1-201ENST00000361530 PLCH2O75038 1416 aa20.79■□□□□ 0.92
CNKSR1-201ENST00000361530 RCAN3Q9UKA8 241 aa20.78■□□□□ 0.92
CNKSR1-201ENST00000361530 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.92
CNKSR1-201ENST00000361530 CDCA7LQ96GN5 454 aa20.77■□□□□ 0.92
CNKSR1-201ENST00000361530 WASHC2CQ9Y4E1 1318 aa20.77■□□□□ 0.91
CNKSR1-201ENST00000361530 TRAPPC8Q9Y2L5 1435 aa20.76■□□□□ 0.91
CNKSR1-201ENST00000361530 TMF1P82094 1093 aa20.76■□□□□ 0.91
CNKSR1-201ENST00000361530 EXOC6Q8TAG9 804 aa20.76■□□□□ 0.91
CNKSR1-201ENST00000361530 EIF2AK4Q9P2K8 1649 aaKnown RBP20.74■□□□□ 0.91
CNKSR1-201ENST00000361530 PDE3BQ13370 1112 aa20.74■□□□□ 0.91
CNKSR1-201ENST00000361530 AFAP1Q8N556 730 aa20.71■□□□□ 0.91
CNKSR1-201ENST00000361530 ZCCHC11Q5TAX3 1644 aaKnown RBP20.71■□□□□ 0.91
CNKSR1-201ENST00000361530 ABCC1P33527 1531 aa20.71■□□□□ 0.91
CNKSR1-201ENST00000361530 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
CNKSR1-201ENST00000361530 BLMP54132 1417 aaPredicted RBP20.68■□□□□ 0.9
CNKSR1-201ENST00000361530 RNF17Q9BXT8 1623 aaKnown RBP20.68■□□□□ 0.9
CNKSR1-201ENST00000361530 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
CNKSR1-201ENST00000361530 DEKP35659 375 aaKnown RBP20.67■□□□□ 0.9
CNKSR1-201ENST00000361530 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
CNKSR1-201ENST00000361530 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
CNKSR1-201ENST00000361530 WDR7Q9Y4E6 1490 aa20.66■□□□□ 0.9
CNKSR1-201ENST00000361530 PLIN1O60240 522 aa20.65■□□□□ 0.9
CNKSR1-201ENST00000361530 NBR1Q14596 966 aa20.65■□□□□ 0.9
CNKSR1-201ENST00000361530 ADAMTS8Q9UP79 889 aa20.64■□□□□ 0.9
CNKSR1-201ENST00000361530 MADDQ8WXG6 1647 aa20.64■□□□□ 0.89
CNKSR1-201ENST00000361530 INSRP06213 1382 aa20.64■□□□□ 0.89
CNKSR1-201ENST00000361530 UHRF1BP1LA0JNW5 1464 aa20.64■□□□□ 0.89
CNKSR1-201ENST00000361530 ZMYM4Q5VZL5 1548 aa20.61■□□□□ 0.89
CNKSR1-201ENST00000361530 KNSTRNQ9Y448 316 aa20.61■□□□□ 0.89
CNKSR1-201ENST00000361530 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
CNKSR1-201ENST00000361530 AMER1Q5JTC6 1135 aaPredicted RBP20.6■□□□□ 0.89
CNKSR1-201ENST00000361530 TRPM2O94759 1503 aa20.6■□□□□ 0.89
CNKSR1-201ENST00000361530 PTPRTO14522 1441 aa20.6■□□□□ 0.89
CNKSR1-201ENST00000361530 RTEL1-TNFRSF6BF6WH68 1400 aa20.6■□□□□ 0.89
CNKSR1-201ENST00000361530 ANP32AP39687 249 aaKnown RBP20.59■□□□□ 0.89
CNKSR1-201ENST00000361530 IPO9Q96P70 1041 aaKnown RBP20.59■□□□□ 0.89
CNKSR1-201ENST00000361530 IQGAP1P46940 1657 aa20.59■□□□□ 0.89
CNKSR1-201ENST00000361530 ZFYVE16Q7Z3T8 1539 aa20.59■□□□□ 0.89
CNKSR1-201ENST00000361530 CLASP1Q7Z460 1538 aa20.59■□□□□ 0.89
CNKSR1-201ENST00000361530 CLTCL1P53675 1640 aa20.58■□□□□ 0.88
CNKSR1-201ENST00000361530 SCAF11Q99590 1463 aaKnown RBP20.57■□□□□ 0.88
CNKSR1-201ENST00000361530 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
CNKSR1-201ENST00000361530 CRBNQ96SW2 442 aa20.56■□□□□ 0.88
CNKSR1-201ENST00000361530 TCERG1O14776 1098 aaKnown RBP20.55■□□□□ 0.88
CNKSR1-201ENST00000361530 SCAPERQ9BY12 1400 aa20.55■□□□□ 0.88
CNKSR1-201ENST00000361530 CEP152O94986 1710 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms