RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
CD46-206ENST00000360212 BCORL1Q5H9F3 1711 aa11.03□□□□□ -0.64
CD46-206ENST00000360212 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
CD46-206ENST00000360212 PKD2Q13563 968 aa11.03□□□□□ -0.64
CD46-206ENST00000360212 TAF7LQ5H9L4 462 aa11.03□□□□□ -0.64
CD46-206ENST00000360212 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
CD46-206ENST00000360212 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
CD46-206ENST00000360212 ANTXR1Q9H6X2 564 aa11.03□□□□□ -0.64
CD46-206ENST00000360212 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
CD46-206ENST00000360212 NAP1L2Q9ULW6 460 aaPredicted RBP11.03□□□□□ -0.64
CD46-206ENST00000360212 FYCO1Q9BQS8 1478 aa11.02□□□□□ -0.65
CD46-206ENST00000360212 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.65
CD46-206ENST00000360212 ZHX1Q9UKY1 873 aaPredicted RBP11.02□□□□□ -0.65
CD46-206ENST00000360212 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.65
CD46-206ENST00000360212 COG6Q9Y2V7 657 aa11.02□□□□□ -0.65
CD46-206ENST00000360212 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.65
CD46-206ENST00000360212 PANK1Q8TE04 598 aa11.02□□□□□ -0.65
CD46-206ENST00000360212 TEX14Q8IWB6 1497 aa11.01□□□□□ -0.65
CD46-206ENST00000360212 FSD2A1L4K1 749 aa11.01□□□□□ -0.65
CD46-206ENST00000360212 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
CD46-206ENST00000360212 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
CD46-206ENST00000360212 UPF2Q9HAU5 1272 aaKnown RBP11□□□□□ -0.65
CD46-206ENST00000360212 MRE11P49959 708 aa11□□□□□ -0.65
CD46-206ENST00000360212 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
CD46-206ENST00000360212 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
CD46-206ENST00000360212 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
CD46-206ENST00000360212 SPINK5Q9NQ38 1064 aaPredicted RBP11□□□□□ -0.65
CD46-206ENST00000360212 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
CD46-206ENST00000360212 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
CD46-206ENST00000360212 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
CD46-206ENST00000360212 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
CD46-206ENST00000360212 PANK3Q9H999 370 aa10.98□□□□□ -0.65
CD46-206ENST00000360212 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
CD46-206ENST00000360212 MIA2Q96PC5 1412 aa10.98□□□□□ -0.65
CD46-206ENST00000360212 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
CD46-206ENST00000360212 R3HCC1Q9Y3T6 440 aaKnown RBP10.98□□□□□ -0.65
CD46-206ENST00000360212 PLEKHH1Q9ULM0 1364 aa10.97□□□□□ -0.65
CD46-206ENST00000360212 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
CD46-206ENST00000360212 CLUAP1Q96AJ1 413 aa10.97□□□□□ -0.65
CD46-206ENST00000360212 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
CD46-206ENST00000360212 GTF2E1P29083 439 aaPredicted RBP10.96□□□□□ -0.65
CD46-206ENST00000360212 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
CD46-206ENST00000360212 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
CD46-206ENST00000360212 TNNQ9UQP3 1299 aa10.95□□□□□ -0.66
CD46-206ENST00000360212 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
CD46-206ENST00000360212 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
CD46-206ENST00000360212 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
CD46-206ENST00000360212 APAF1O14727 1248 aa10.94□□□□□ -0.66
CD46-206ENST00000360212 TPM2P07951 284 aa10.93□□□□□ -0.66
CD46-206ENST00000360212 RIPK4P57078 832 aa10.93□□□□□ -0.66
CD46-206ENST00000360212 TBC1D32Q96NH3 1257 aa10.93□□□□□ -0.66
CD46-206ENST00000360212 CHMP5Q9NZZ3 219 aa10.93□□□□□ -0.66
CD46-206ENST00000360212 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
CD46-206ENST00000360212 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
CD46-206ENST00000360212 XPCQ01831 940 aaPredicted RBP10.92□□□□□ -0.66
CD46-206ENST00000360212 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
CD46-206ENST00000360212 NCLP19338 710 aaKnown RBP10.92□□□□□ -0.66
CD46-206ENST00000360212 RAD54L2Q9Y4B4 1467 aa10.92□□□□□ -0.66
CD46-206ENST00000360212 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
CD46-206ENST00000360212 MSNP26038 577 aaKnown RBP10.91□□□□□ -0.66
CD46-206ENST00000360212 PDZRN3Q9UPQ7 1066 aa10.91□□□□□ -0.66
CD46-206ENST00000360212 BICRAQ9NZM4 1560 aa10.91□□□□□ -0.66
CD46-206ENST00000360212 PARD3Q8TEW0 1356 aa10.91□□□□□ -0.66
CD46-206ENST00000360212 SNAPC4Q5SXM2 1469 aa10.91□□□□□ -0.66
CD46-206ENST00000360212 JARID2Q92833 1246 aaPredicted RBP10.9□□□□□ -0.66
CD46-206ENST00000360212 C22orf23Q9BZE7 217 aa10.9□□□□□ -0.66
CD46-206ENST00000360212 MPNDQ8N594 471 aa10.9□□□□□ -0.67
CD46-206ENST00000360212 PCDHB15Q9Y5E8 787 aa10.9□□□□□ -0.67
CD46-206ENST00000360212 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
CD46-206ENST00000360212 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
CD46-206ENST00000360212 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
CD46-206ENST00000360212 MAPK8IP3Q9UPT6 1336 aa10.88□□□□□ -0.67
CD46-206ENST00000360212 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
CD46-206ENST00000360212 HSCBQ8IWL3 235 aa10.88□□□□□ -0.67
CD46-206ENST00000360212 TNPO1Q92973 898 aaKnown RBP10.88□□□□□ -0.67
CD46-206ENST00000360212 UQCRHLA0A096LP55 91 aa10.88□□□□□ -0.67
CD46-206ENST00000360212 UQCRHP07919 91 aa10.88□□□□□ -0.67
CD46-206ENST00000360212 TSC1Q92574 1164 aa10.88□□□□□ -0.67
CD46-206ENST00000360212 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
CD46-206ENST00000360212 PLCD3Q8N3E9 789 aa10.88□□□□□ -0.67
CD46-206ENST00000360212 ANP32BQ92688 251 aaKnown RBP10.87□□□□□ -0.67
CD46-206ENST00000360212 DDX11L8A8MPP1 907 aa10.86□□□□□ -0.67
CD46-206ENST00000360212 RLBP1P12271 317 aa10.86□□□□□ -0.67
CD46-206ENST00000360212 IPO4Q8TEX9 1081 aaKnown RBP10.86□□□□□ -0.67
CD46-206ENST00000360212 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
CD46-206ENST00000360212 HSP90AB1P08238 724 aaKnown RBP10.86□□□□□ -0.67
CD46-206ENST00000360212 PPP2R1AP30153 589 aa10.86□□□□□ -0.67
CD46-206ENST00000360212 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
CD46-206ENST00000360212 ZSCAN30Q86W11 494 aa10.86□□□□□ -0.67
CD46-206ENST00000360212 KDM5CP41229 1560 aa10.85□□□□□ -0.67
CD46-206ENST00000360212 DISP3Q9P2K9 1392 aa10.85□□□□□ -0.67
CD46-206ENST00000360212 OFD1O75665 1012 aa10.85□□□□□ -0.67
CD46-206ENST00000360212 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
CD46-206ENST00000360212 KNSTRNQ9Y448 316 aa10.85□□□□□ -0.67
CD46-206ENST00000360212 IGSF3O75054 1194 aa10.84□□□□□ -0.67
CD46-206ENST00000360212 NUP155O75694 1391 aa10.84□□□□□ -0.67
CD46-206ENST00000360212 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
CD46-206ENST00000360212 CDK13Q14004 1512 aaKnown RBP10.84□□□□□ -0.67
CD46-206ENST00000360212 UGGT2Q9NYU1 1516 aa10.84□□□□□ -0.67
CD46-206ENST00000360212 VGLL3A8MV65 326 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms