RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 YEATS2Q9ULM3 1422 aa36.62■■■■□ 3.45
SHARPIN-201ENST00000359551 MPHOSPH9Q99550 1183 aa36.58■■■■□ 3.45
SHARPIN-201ENST00000359551 IQGAP3Q86VI3 1631 aa36.58■■■■□ 3.45
SHARPIN-201ENST00000359551 NUP155O75694 1391 aa36.58■■■■□ 3.45
SHARPIN-201ENST00000359551 ZEB1P37275 1124 aaPredicted RBP36.58■■■■□ 3.45
SHARPIN-201ENST00000359551 REREQ9P2R6 1566 aa36.56■■■■□ 3.44
SHARPIN-201ENST00000359551 RNF17Q9BXT8 1623 aaKnown RBP36.55■■■■□ 3.44
SHARPIN-201ENST00000359551 ARHGEF40Q8TER5 1519 aa36.54■■■■□ 3.44
SHARPIN-201ENST00000359551 FAM135AQ9P2D6 1515 aa36.53■■■■□ 3.44
SHARPIN-201ENST00000359551 MROH1Q8NDA8 1641 aa36.52■■■■□ 3.44
SHARPIN-201ENST00000359551 ATP10AO60312 1499 aa36.52■■■■□ 3.44
SHARPIN-201ENST00000359551 PRDM15P57071 1507 aaPredicted RBP36.51■■■■□ 3.44
SHARPIN-201ENST00000359551 SLC4A1APQ9BWU0 796 aaKnown RBP36.5■■■■□ 3.43
SHARPIN-201ENST00000359551 VWDEQ8N2E2 1590 aa36.49■■■■□ 3.43
SHARPIN-201ENST00000359551 KIF3BO15066 747 aa36.47■■■■□ 3.43
SHARPIN-201ENST00000359551 AGLP35573 1532 aa36.42■■■■□ 3.42
SHARPIN-201ENST00000359551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.4■■■■□ 3.421e-6■□□□□ 10.5
SHARPIN-201ENST00000359551 TET3O43151 1660 aa36.36■■■■□ 3.41
SHARPIN-201ENST00000359551 SIGLEC1Q9BZZ2 1709 aa36.36■■■■□ 3.41
SHARPIN-201ENST00000359551 KANK1Q14678 1352 aa36.36■■■■□ 3.41
SHARPIN-201ENST00000359551 PKD2Q13563 968 aa36.35■■■■□ 3.41
SHARPIN-201ENST00000359551 ANKRD30BQ9BXX2 1392 aa36.35■■■■□ 3.41
SHARPIN-201ENST00000359551 LMTK2Q8IWU2 1503 aa36.33■■■■□ 3.41
SHARPIN-201ENST00000359551 FOXD1Q16676 465 aa36.31■■■■□ 3.4
SHARPIN-201ENST00000359551 CEP152O94986 1710 aa36.3■■■■□ 3.4
SHARPIN-201ENST00000359551 E9PCH4 1651 aa36.29■■■■□ 3.4
SHARPIN-201ENST00000359551 SIN3AQ96ST3 1273 aa36.27■■■■□ 3.4
SHARPIN-201ENST00000359551 ZC3H13Q5T200 1668 aaKnown RBP36.27■■■■□ 3.4
SHARPIN-201ENST00000359551 GGT6Q6P531 493 aa36.23■■■■□ 3.39
SHARPIN-201ENST00000359551 ABCC3O15438 1527 aa36.23■■■■□ 3.39
SHARPIN-201ENST00000359551 EFCAB6Q5THR3 1501 aa36.23■■■■□ 3.39
SHARPIN-201ENST00000359551 RPRD2Q5VT52 1461 aaKnown RBP36.17■■■■□ 3.38
SHARPIN-201ENST00000359551 CAMSAP1Q5T5Y3 1602 aa36.17■■■■□ 3.38
SHARPIN-201ENST00000359551 TIMELESSQ9UNS1 1208 aa36.16■■■■□ 3.38
SHARPIN-201ENST00000359551 NEUROD1Q13562 356 aa36.15■■■■□ 3.38
SHARPIN-201ENST00000359551 PLA2R1Q13018 1463 aa36.14■■■■□ 3.38
SHARPIN-201ENST00000359551 SPHKAPQ2M3C7 1700 aa36.14■■■■□ 3.38
SHARPIN-201ENST00000359551 PPP6R1Q9UPN7 881 aa36.13■■■■□ 3.37
SHARPIN-201ENST00000359551 WASHC2CQ9Y4E1 1318 aa36.11■■■■□ 3.37
SHARPIN-201ENST00000359551 PTPRTO14522 1441 aa36.1■■■■□ 3.37
SHARPIN-201ENST00000359551 TRPM2O94759 1503 aa36.07■■■■□ 3.37
SHARPIN-201ENST00000359551 ARHGAP31Q2M1Z3 1444 aa36.06■■■■□ 3.36
SHARPIN-201ENST00000359551 NPATQ14207 1427 aa36.05■■■■□ 3.36
SHARPIN-201ENST00000359551 TONSLQ96HA7 1378 aa36.03■■■■□ 3.36
SHARPIN-201ENST00000359551 CLTCQ00610 1675 aaKnown RBP36.02■■■■□ 3.36
SHARPIN-201ENST00000359551 CCDC144AA2RUR9 1427 aa36.01■■■■□ 3.35
SHARPIN-201ENST00000359551 CFAP65Q6ZU64 1925 aaKnown RBP35.97■■■■□ 3.35
SHARPIN-201ENST00000359551 ARID4BQ4LE39 1312 aaPredicted RBP35.96■■■■□ 3.35
SHARPIN-201ENST00000359551 CLTCL1P53675 1640 aa35.94■■■■□ 3.34
SHARPIN-201ENST00000359551 MLECQ14165 292 aa35.93■■■■□ 3.34
SHARPIN-201ENST00000359551 NOS1P29475 1434 aa35.91■■■■□ 3.34
SHARPIN-201ENST00000359551 CNTLNQ9NXG0 1405 aa35.91■■■■□ 3.34
SHARPIN-201ENST00000359551 PREX1Q8TCU6 1659 aa35.91■■■■□ 3.34
SHARPIN-201ENST00000359551 MROH2AA6NES4 1674 aa35.89■■■■□ 3.34
SHARPIN-201ENST00000359551 PPP1R15AO75807 674 aaPredicted RBP35.87■■■■□ 3.33
SHARPIN-201ENST00000359551 L3MBTL2Q969R5 705 aa35.85■■■■□ 3.33
SHARPIN-201ENST00000359551 SYNMO15061 1565 aa35.85■■■■□ 3.33
SHARPIN-201ENST00000359551 NEURL4Q96JN8 1562 aa35.85■■■■□ 3.33
SHARPIN-201ENST00000359551 PIK3C2BO00750 1634 aa35.84■■■■□ 3.33
SHARPIN-201ENST00000359551 FER1L4A9Z1Z3 1794 aa35.84■■■■□ 3.33
SHARPIN-201ENST00000359551 KIF1BO60333 1816 aa35.83■■■■□ 3.33
SHARPIN-201ENST00000359551 UGGT1Q9NYU2 1555 aa35.83■■■■□ 3.33
SHARPIN-201ENST00000359551 SPATA31E1Q6ZUB1 1445 aa35.81■■■■□ 3.32
SHARPIN-201ENST00000359551 ERVK-7P63135 1459 aa35.8■■■■□ 3.32
SHARPIN-201ENST00000359551 ESF1Q9H501 851 aaKnown RBP35.79■■■■□ 3.32
SHARPIN-201ENST00000359551 SPATA31D1Q6ZQQ2 1576 aa35.78■■■■□ 3.32
SHARPIN-201ENST00000359551 ZMYM3Q14202 1370 aa35.77■■■■□ 3.32
SHARPIN-201ENST00000359551 ADAMTSL3P82987 1691 aa35.71■■■■□ 3.31
SHARPIN-201ENST00000359551 ADGRB3O60242 1522 aa35.7■■■■□ 3.31
SHARPIN-201ENST00000359551 C3P01024 1663 aa35.69■■■■□ 3.3
SHARPIN-201ENST00000359551 FBXO31Q5XUX0 539 aaPredicted RBP35.68■■■■□ 3.3
SHARPIN-201ENST00000359551 SLC52A1Q9NWF4 448 aa35.67■■■■□ 3.3
SHARPIN-201ENST00000359551 MADDQ8WXG6 1647 aa35.67■■■■□ 3.3
SHARPIN-201ENST00000359551 UHRF1BP1Q6BDS2 1440 aa35.65■■■■□ 3.3
SHARPIN-201ENST00000359551 IFT172Q9UG01 1749 aa35.63■■■■□ 3.29
SHARPIN-201ENST00000359551 RGL3Q3MIN7 710 aa35.62■■■■□ 3.29
SHARPIN-201ENST00000359551 DCAF11Q8TEB1 546 aa35.6■■■■□ 3.29
SHARPIN-201ENST00000359551 RIMS1Q86UR5 1692 aaKnown RBP35.6■■■■□ 3.29
SHARPIN-201ENST00000359551 IDI1Q13907 227 aa35.59■■■■□ 3.29
SHARPIN-201ENST00000359551 TMEM131LA2VDJ0 1609 aa35.58■■■■□ 3.29
SHARPIN-201ENST00000359551 NBPF8Q3BBV2 869 aa35.57■■■■□ 3.28
SHARPIN-201ENST00000359551 MYO5BQ9ULV0 1848 aa35.57■■■■□ 3.28
SHARPIN-201ENST00000359551 STAC3Q96MF2 364 aa35.55■■■■□ 3.28
SHARPIN-201ENST00000359551 PPLO60437 1756 aa35.54■■■■□ 3.28
SHARPIN-201ENST00000359551 TNRQ92752 1358 aa35.52■■■■□ 3.28
SHARPIN-201ENST00000359551 PRAG1Q86YV5 1406 aa35.52■■■■□ 3.28
SHARPIN-201ENST00000359551 MYOM2P54296 1465 aa35.5■■■■□ 3.27
SHARPIN-201ENST00000359551 KDM2AQ9Y2K7 1162 aa35.5■■■■□ 3.27
SHARPIN-201ENST00000359551 KDM5AP29375 1690 aaKnown RBP35.5■■■■□ 3.27
SHARPIN-201ENST00000359551 TRPM1Q7Z4N2 1603 aa35.47■■■■□ 3.27
SHARPIN-201ENST00000359551 RPGRIP1LQ68CZ1 1315 aa35.47■■■■□ 3.27
SHARPIN-201ENST00000359551 RALGAPBQ86X10 1494 aa35.47■■■■□ 3.27
SHARPIN-201ENST00000359551 CHGAP10645 457 aaKnown RBP35.46■■■■□ 3.27
SHARPIN-201ENST00000359551 CEBPAP49715 358 aaPredicted RBP35.46■■■■□ 3.27
SHARPIN-201ENST00000359551 NEXMIFQ5QGS0 1516 aa35.45■■■■□ 3.27
SHARPIN-201ENST00000359551 NLRP1Q9C000 1473 aa35.43■■■■□ 3.26
SHARPIN-201ENST00000359551 A2ML1A8K2U0 1454 aa35.41■■■■□ 3.26
SHARPIN-201ENST00000359551 NRXN1Q9ULB1 1477 aa35.41■■■■□ 3.26
SHARPIN-201ENST00000359551 ZNF326Q5BKZ1 582 aaKnown RBP35.41■■■■□ 3.26
SHARPIN-201ENST00000359551 UBR1Q8IWV7 1749 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms