RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 TSPY10P0CW01 314 aa21.11■□□□□ 0.97
CTPS2-201ENST00000359276 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
CTPS2-201ENST00000359276 EHBP1L1Q8N3D4 1523 aa21.09■□□□□ 0.97
CTPS2-201ENST00000359276 APAF1O14727 1248 aa21.07■□□□□ 0.96
CTPS2-201ENST00000359276 PANK1Q8TE04 598 aa21.07■□□□□ 0.96
CTPS2-201ENST00000359276 CLUAP1Q96AJ1 413 aa21.06■□□□□ 0.96
CTPS2-201ENST00000359276 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
CTPS2-201ENST00000359276 KDM2BQ8NHM5 1336 aa21.06■□□□□ 0.96
CTPS2-201ENST00000359276 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
CTPS2-201ENST00000359276 IGHDP01880 384 aa21.05■□□□□ 0.96
CTPS2-201ENST00000359276 DAPK1P53355 1430 aa21.05■□□□□ 0.96
CTPS2-201ENST00000359276 TMF1P82094 1093 aa21.05■□□□□ 0.96
CTPS2-201ENST00000359276 ARID3AQ99856 593 aa21.05■□□□□ 0.96
CTPS2-201ENST00000359276 XRCC6P12956 609 aaKnown RBP eCLIP21.04■□□□□ 0.96
CTPS2-201ENST00000359276 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
CTPS2-201ENST00000359276 BCL2L13Q9BXK5 485 aa21.04■□□□□ 0.96
CTPS2-201ENST00000359276 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
CTPS2-201ENST00000359276 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
CTPS2-201ENST00000359276 FBLN2P98095 1184 aa21.01■□□□□ 0.95
CTPS2-201ENST00000359276 UGGT2Q9NYU1 1516 aa21.01■□□□□ 0.95
CTPS2-201ENST00000359276 ABCC5O15440 1437 aa21.01■□□□□ 0.95
CTPS2-201ENST00000359276 KIAA1107Q9UPP5 1409 aa21.01■□□□□ 0.95
CTPS2-201ENST00000359276 HECW1Q76N89 1606 aa21.01■□□□□ 0.95
CTPS2-201ENST00000359276 TNNT2P45379 298 aaPredicted RBP21■□□□□ 0.95
CTPS2-201ENST00000359276 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
CTPS2-201ENST00000359276 TRAK2O60296 914 aa20.98■□□□□ 0.95
CTPS2-201ENST00000359276 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
CTPS2-201ENST00000359276 FOXD4L1Q9NU39 408 aa20.97■□□□□ 0.95
CTPS2-201ENST00000359276 BCORL1Q5H9F3 1711 aa20.96■□□□□ 0.95
CTPS2-201ENST00000359276 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
CTPS2-201ENST00000359276 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
CTPS2-201ENST00000359276 TBC1D2Q9BYX2 928 aa20.96■□□□□ 0.95
CTPS2-201ENST00000359276 RRP7AQ9Y3A4 280 aaKnown RBP20.96■□□□□ 0.95
CTPS2-201ENST00000359276 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
CTPS2-201ENST00000359276 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
CTPS2-201ENST00000359276 MCM4P33991 863 aa20.95■□□□□ 0.94
CTPS2-201ENST00000359276 MAPK8IP3Q9UPT6 1336 aa20.94■□□□□ 0.94
CTPS2-201ENST00000359276 ANP32BQ92688 251 aaKnown RBP20.94■□□□□ 0.94
CTPS2-201ENST00000359276 PPP2R1AP30153 589 aa20.93■□□□□ 0.94
CTPS2-201ENST00000359276 CENPJQ9HC77 1338 aaPredicted RBP20.93■□□□□ 0.94
CTPS2-201ENST00000359276 EPRSP07814 1512 aaKnown RBP20.93■□□□□ 0.94
CTPS2-201ENST00000359276 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
CTPS2-201ENST00000359276 PLEKHH1Q9ULM0 1364 aa20.92■□□□□ 0.94
CTPS2-201ENST00000359276 ROCK1Q13464 1354 aa20.92■□□□□ 0.94
CTPS2-201ENST00000359276 HNRNPMP52272 730 aaKnown RBP eCLIP20.92■□□□□ 0.941e-7■■■□□ 14.8
CTPS2-201ENST00000359276 SPINK5Q9NQ38 1064 aaPredicted RBP20.92■□□□□ 0.94
CTPS2-201ENST00000359276 RRP9O43818 475 aaKnown RBP20.91■□□□□ 0.94
CTPS2-201ENST00000359276 SLFN5Q08AF3 891 aa20.91■□□□□ 0.94
CTPS2-201ENST00000359276 HSCBQ8IWL3 235 aa20.91■□□□□ 0.94
CTPS2-201ENST00000359276 ESPNB1AK53 854 aa20.9■□□□□ 0.94
CTPS2-201ENST00000359276 ANKRD50Q9ULJ7 1429 aa20.9■□□□□ 0.94
CTPS2-201ENST00000359276 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.94
CTPS2-201ENST00000359276 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.93
CTPS2-201ENST00000359276 CGNL1Q0VF96 1302 aa20.89■□□□□ 0.93
CTPS2-201ENST00000359276 MRE11P49959 708 aa20.89■□□□□ 0.93
CTPS2-201ENST00000359276 CLCN1P35523 988 aa20.88■□□□□ 0.93
CTPS2-201ENST00000359276 CHMP5Q9NZZ3 219 aa20.87■□□□□ 0.93
CTPS2-201ENST00000359276 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
CTPS2-201ENST00000359276 ZBTB7CA1YPR0 619 aa20.87■□□□□ 0.93
CTPS2-201ENST00000359276 PDZRN3Q9UPQ7 1066 aa20.87■□□□□ 0.93
CTPS2-201ENST00000359276 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
CTPS2-201ENST00000359276 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
CTPS2-201ENST00000359276 GRPEL1Q9HAV7 217 aa20.86■□□□□ 0.93
CTPS2-201ENST00000359276 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
CTPS2-201ENST00000359276 PZPP20742 1482 aa20.85■□□□□ 0.93
CTPS2-201ENST00000359276 E9PSI1 815 aa20.85■□□□□ 0.93
CTPS2-201ENST00000359276 RBM10P98175 930 aaKnown RBP20.85■□□□□ 0.93
CTPS2-201ENST00000359276 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
CTPS2-201ENST00000359276 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
CTPS2-201ENST00000359276 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
CTPS2-201ENST00000359276 USP19O94966 1318 aa20.84■□□□□ 0.93
CTPS2-201ENST00000359276 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
CTPS2-201ENST00000359276 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
CTPS2-201ENST00000359276 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.93
CTPS2-201ENST00000359276 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
CTPS2-201ENST00000359276 RWDD1Q9H446 243 aaPredicted RBP20.83■□□□□ 0.92
CTPS2-201ENST00000359276 NESP48681 1621 aa20.82■□□□□ 0.92
CTPS2-201ENST00000359276 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
CTPS2-201ENST00000359276 FAM13BQ9NYF5 915 aa20.8■□□□□ 0.92
CTPS2-201ENST00000359276 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
CTPS2-201ENST00000359276 TNNQ9UQP3 1299 aa20.8■□□□□ 0.92
CTPS2-201ENST00000359276 DMRT2Q9Y5R5 561 aa20.8■□□□□ 0.92
CTPS2-201ENST00000359276 MSNP26038 577 aaKnown RBP20.79■□□□□ 0.92
CTPS2-201ENST00000359276 TBC1D32Q96NH3 1257 aa20.79■□□□□ 0.92
CTPS2-201ENST00000359276 RALGAPBQ86X10 1494 aa20.79■□□□□ 0.92
CTPS2-201ENST00000359276 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
CTPS2-201ENST00000359276 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
CTPS2-201ENST00000359276 DDX11L8A8MPP1 907 aa20.78■□□□□ 0.92
CTPS2-201ENST00000359276 KIAA1211Q6ZU35 1233 aa20.77■□□□□ 0.92
CTPS2-201ENST00000359276 PCDHB15Q9Y5E8 787 aa20.77■□□□□ 0.92
CTPS2-201ENST00000359276 KDM5CP41229 1560 aa20.77■□□□□ 0.92
CTPS2-201ENST00000359276 CTTNBP2Q8WZ74 1663 aa20.77■□□□□ 0.91
CTPS2-201ENST00000359276 ANTXR1Q9H6X2 564 aa20.76■□□□□ 0.91
CTPS2-201ENST00000359276 PDE3AQ14432 1141 aa20.76■□□□□ 0.91
CTPS2-201ENST00000359276 GBP4Q96PP9 640 aa20.74■□□□□ 0.91
CTPS2-201ENST00000359276 TESK2Q96S53 571 aa20.74■□□□□ 0.91
CTPS2-201ENST00000359276 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
CTPS2-201ENST00000359276 GOLGA6L22H0YM25 854 aa20.73■□□□□ 0.91
CTPS2-201ENST00000359276 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
CTPS2-201ENST00000359276 CUL7Q14999 1698 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms