RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 FAM161AQ3B820 660 aa23.72■■□□□ 1.39
PTPA-206ENST00000358994 ARID3CA6NKF2 412 aa23.72■■□□□ 1.39
PTPA-206ENST00000358994 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
PTPA-206ENST00000358994 PARD3Q8TEW0 1356 aa23.7■■□□□ 1.38
PTPA-206ENST00000358994 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
PTPA-206ENST00000358994 CENPQQ7L2Z9 268 aaPredicted RBP23.67■■□□□ 1.38
PTPA-206ENST00000358994 PKD2Q13563 968 aa23.67■■□□□ 1.38
PTPA-206ENST00000358994 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
PTPA-206ENST00000358994 WDR62O43379 1518 aa23.62■■□□□ 1.37
PTPA-206ENST00000358994 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
PTPA-206ENST00000358994 RRAGDQ9NQL2 400 aaPredicted RBP23.61■■□□□ 1.37
PTPA-206ENST00000358994 POGKQ9P215 609 aa23.6■■□□□ 1.37
PTPA-206ENST00000358994 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
PTPA-206ENST00000358994 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
PTPA-206ENST00000358994 INSRP06213 1382 aa23.57■■□□□ 1.36
PTPA-206ENST00000358994 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
PTPA-206ENST00000358994 RGS3P49796 1198 aa23.56■■□□□ 1.36
PTPA-206ENST00000358994 ZMYM4Q5VZL5 1548 aa23.56■■□□□ 1.36
PTPA-206ENST00000358994 ARHGEF12Q9NZN5 1544 aa23.56■■□□□ 1.36
PTPA-206ENST00000358994 PLEKHH2Q8IVE3 1493 aa23.54■■□□□ 1.36
PTPA-206ENST00000358994 KIAA0586Q9BVV6 1533 aa23.54■■□□□ 1.36
PTPA-206ENST00000358994 PKNOX2Q96KN3 472 aa23.53■■□□□ 1.36
PTPA-206ENST00000358994 CC2D1BQ5T0F9 858 aaKnown RBP23.52■■□□□ 1.36
PTPA-206ENST00000358994 ADGBQ8N7X0 1667 aa23.51■■□□□ 1.35
PTPA-206ENST00000358994 USP19O94966 1318 aa23.5■■□□□ 1.35
PTPA-206ENST00000358994 FBLN2P98095 1184 aa23.49■■□□□ 1.35
PTPA-206ENST00000358994 DUSP27Q5VZP5 1158 aa23.48■■□□□ 1.35
PTPA-206ENST00000358994 IQGAP2Q13576 1575 aa23.48■■□□□ 1.35
PTPA-206ENST00000358994 CAMSAP2Q08AD1 1489 aa23.47■■□□□ 1.35
PTPA-206ENST00000358994 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
PTPA-206ENST00000358994 VIRMAQ69YN4 1812 aaKnown RBP23.46■■□□□ 1.35
PTPA-206ENST00000358994 L1TD1Q5T7N2 865 aaKnown RBP23.45■■□□□ 1.34
PTPA-206ENST00000358994 PLEKHH1Q9ULM0 1364 aa23.44■■□□□ 1.34
PTPA-206ENST00000358994 ADAMTS8Q9UP79 889 aa23.44■■□□□ 1.34
PTPA-206ENST00000358994 ANKRD50Q9ULJ7 1429 aa23.42■■□□□ 1.34
PTPA-206ENST00000358994 SLKQ9H2G2 1235 aaPredicted RBP23.41■■□□□ 1.34
PTPA-206ENST00000358994 NUP155O75694 1391 aa23.41■■□□□ 1.34
PTPA-206ENST00000358994 GLIPR1L2Q4G1C9 344 aa23.41■■□□□ 1.34
PTPA-206ENST00000358994 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.41■■□□□ 1.34
PTPA-206ENST00000358994 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
PTPA-206ENST00000358994 SEC24BO95487 1268 aa23.4■■□□□ 1.34
PTPA-206ENST00000358994 CROCC2H7BZ55 1655 aa23.4■■□□□ 1.34
PTPA-206ENST00000358994 ANKRD30AQ9BXX3 1397 aa23.39■■□□□ 1.34
PTPA-206ENST00000358994 PANK3Q9H999 370 aa23.39■■□□□ 1.33
PTPA-206ENST00000358994 CEP170Q5SW79 1584 aa23.39■■□□□ 1.33
PTPA-206ENST00000358994 ZNF521Q96K83 1311 aa23.38■■□□□ 1.33
PTPA-206ENST00000358994 NUP153P49790 1475 aaKnown RBP23.38■■□□□ 1.33
PTPA-206ENST00000358994 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
PTPA-206ENST00000358994 ZNF777Q9ULD5 760 aaPredicted RBP23.37■■□□□ 1.33
PTPA-206ENST00000358994 COL17A1Q9UMD9 1497 aaPredicted RBP23.36■■□□□ 1.33
PTPA-206ENST00000358994 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
PTPA-206ENST00000358994 BECN1Q14457 450 aa23.36■■□□□ 1.33
PTPA-206ENST00000358994 DISP3Q9P2K9 1392 aa23.36■■□□□ 1.33
PTPA-206ENST00000358994 XRCC6P12956 609 aaKnown RBP eCLIP23.36■■□□□ 1.33
PTPA-206ENST00000358994 GOLGA2Q08379 1002 aa23.36■■□□□ 1.33
PTPA-206ENST00000358994 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
PTPA-206ENST00000358994 IGHDP01880 384 aa23.35■■□□□ 1.33
PTPA-206ENST00000358994 NAP1L5Q96NT1 182 aaPredicted RBP23.35■■□□□ 1.33
PTPA-206ENST00000358994 IFT140Q96RY7 1462 aa23.34■■□□□ 1.33
PTPA-206ENST00000358994 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
PTPA-206ENST00000358994 VSIG10Q8N0Z9 540 aa23.34■■□□□ 1.33
PTPA-206ENST00000358994 KDM5DQ9BY66 1539 aa23.34■■□□□ 1.33
PTPA-206ENST00000358994 ARXQ96QS3 562 aa23.33■■□□□ 1.33
PTPA-206ENST00000358994 ZMYND15Q9H091 742 aa23.33■■□□□ 1.33
PTPA-206ENST00000358994 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.32
PTPA-206ENST00000358994 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.32
PTPA-206ENST00000358994 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
PTPA-206ENST00000358994 NLRP1Q9C000 1473 aa23.32■■□□□ 1.32
PTPA-206ENST00000358994 PRAG1Q86YV5 1406 aa23.32■■□□□ 1.32
PTPA-206ENST00000358994 TESK2Q96S53 571 aa23.32■■□□□ 1.32
PTPA-206ENST00000358994 PNNQ9H307 717 aaKnown RBP23.32■■□□□ 1.32
PTPA-206ENST00000358994 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
PTPA-206ENST00000358994 CLCN1P35523 988 aa23.32■■□□□ 1.32
PTPA-206ENST00000358994 SLFN5Q08AF3 891 aa23.31■■□□□ 1.32
PTPA-206ENST00000358994 FSD2A1L4K1 749 aa23.3■■□□□ 1.32
PTPA-206ENST00000358994 PANK2Q9BZ23 570 aa23.29■■□□□ 1.32
PTPA-206ENST00000358994 GOLGA6L3A6NEY3 463 aa23.28■■□□□ 1.32
PTPA-206ENST00000358994 TROQ12816 1431 aaPredicted RBP23.28■■□□□ 1.32
PTPA-206ENST00000358994 HSP90AA2PQ14568 343 aaPredicted RBP23.28■■□□□ 1.32
PTPA-206ENST00000358994 BCAR3O75815 825 aa23.27■■□□□ 1.32
PTPA-206ENST00000358994 WDR43Q15061 677 aaKnown RBP eCLIP23.27■■□□□ 1.32
PTPA-206ENST00000358994 TRMT2AQ8IZ69 625 aaKnown RBP23.27■■□□□ 1.32
PTPA-206ENST00000358994 RAPGEF6Q8TEU7 1601 aa23.27■■□□□ 1.32
PTPA-206ENST00000358994 GPRASP1Q5JY77 1395 aa23.27■■□□□ 1.31
PTPA-206ENST00000358994 HSP90AA1P07900 732 aaKnown RBP23.26■■□□□ 1.31
PTPA-206ENST00000358994 RRP9O43818 475 aaKnown RBP23.25■■□□□ 1.31
PTPA-206ENST00000358994 SPINK5Q9NQ38 1064 aaPredicted RBP23.25■■□□□ 1.31
PTPA-206ENST00000358994 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
PTPA-206ENST00000358994 ERBINQ96RT1 1412 aa23.24■■□□□ 1.31
PTPA-206ENST00000358994 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
PTPA-206ENST00000358994 MAPK8IP3Q9UPT6 1336 aa23.24■■□□□ 1.31
PTPA-206ENST00000358994 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
PTPA-206ENST00000358994 PTPRGP23470 1445 aa23.23■■□□□ 1.31
PTPA-206ENST00000358994 TBC1D2Q9BYX2 928 aa23.23■■□□□ 1.31
PTPA-206ENST00000358994 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
PTPA-206ENST00000358994 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
PTPA-206ENST00000358994 PRDM15P57071 1507 aaPredicted RBP23.22■■□□□ 1.31
PTPA-206ENST00000358994 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
PTPA-206ENST00000358994 GZF1Q9H116 711 aaPredicted RBP23.22■■□□□ 1.31
PTPA-206ENST00000358994 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms