RNA–Protein interactions for RNA: ENST00000358355.5

USP20-202, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-202ENST00000358355 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
USP20-202ENST00000358355 U2AF1L5P0DN76 240 aaPredicted RBP16.63■□□□□ 0.25
USP20-202ENST00000358355 U2AF1Q01081 240 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP20-202ENST00000358355 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
USP20-202ENST00000358355 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
USP20-202ENST00000358355 NUTM2DQ5VT03 806 aaPredicted RBP16.61■□□□□ 0.25
USP20-202ENST00000358355 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
USP20-202ENST00000358355 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
USP20-202ENST00000358355 VGFO15240 615 aaPredicted RBP16.61■□□□□ 0.25
USP20-202ENST00000358355 ABCC2Q92887 1545 aa16.61■□□□□ 0.25
USP20-202ENST00000358355 NPHP1O15259 732 aa16.6■□□□□ 0.25
USP20-202ENST00000358355 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
USP20-202ENST00000358355 PCF11O94913 1555 aaKnown RBP16.59■□□□□ 0.25
USP20-202ENST00000358355 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
USP20-202ENST00000358355 TRAK1Q9UPV9 953 aa16.59■□□□□ 0.25
USP20-202ENST00000358355 NGDNQ8NEJ9 315 aaKnown RBP16.58■□□□□ 0.25
USP20-202ENST00000358355 CALD1Q05682 793 aaKnown RBP16.58■□□□□ 0.24
USP20-202ENST00000358355 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
USP20-202ENST00000358355 WDR7Q9Y4E6 1490 aa16.57■□□□□ 0.24
USP20-202ENST00000358355 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
USP20-202ENST00000358355 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
USP20-202ENST00000358355 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
USP20-202ENST00000358355 DHX57Q6P158 1386 aaKnown RBP16.56■□□□□ 0.24
USP20-202ENST00000358355 RGS3P49796 1198 aa16.55■□□□□ 0.24
USP20-202ENST00000358355 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
USP20-202ENST00000358355 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
USP20-202ENST00000358355 RAPGEF6Q8TEU7 1601 aa16.54■□□□□ 0.24
USP20-202ENST00000358355 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
USP20-202ENST00000358355 CHMP4AQ9BY43 222 aa16.54■□□□□ 0.24
USP20-202ENST00000358355 ADGRL1O94910 1474 aa16.54■□□□□ 0.24
USP20-202ENST00000358355 FANCAO15360 1455 aa16.53■□□□□ 0.24
USP20-202ENST00000358355 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.24
USP20-202ENST00000358355 EHBP1L1Q8N3D4 1523 aa16.51■□□□□ 0.23
USP20-202ENST00000358355 NBR1Q14596 966 aa16.51■□□□□ 0.23
USP20-202ENST00000358355 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
USP20-202ENST00000358355 NCLP19338 710 aaKnown RBP16.49■□□□□ 0.23
USP20-202ENST00000358355 NUTM2FA1L443 756 aa16.49■□□□□ 0.23
USP20-202ENST00000358355 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
USP20-202ENST00000358355 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
USP20-202ENST00000358355 TIAM1Q13009 1591 aa16.48■□□□□ 0.23
USP20-202ENST00000358355 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
USP20-202ENST00000358355 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
USP20-202ENST00000358355 AMPHP49418 695 aa16.47■□□□□ 0.23
USP20-202ENST00000358355 TEX14Q8IWB6 1497 aa16.46■□□□□ 0.23
USP20-202ENST00000358355 KIF14Q15058 1648 aa16.46■□□□□ 0.23
USP20-202ENST00000358355 EVC2Q86UK5 1308 aa16.46■□□□□ 0.22
USP20-202ENST00000358355 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
USP20-202ENST00000358355 PLEKHH2Q8IVE3 1493 aa16.45■□□□□ 0.22
USP20-202ENST00000358355 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
USP20-202ENST00000358355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.45■□□□□ 0.22
USP20-202ENST00000358355 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
USP20-202ENST00000358355 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
USP20-202ENST00000358355 ANKRD50Q9ULJ7 1429 aa16.43■□□□□ 0.22
USP20-202ENST00000358355 RIMBP3CA6NJZ7 1639 aa16.43■□□□□ 0.22
USP20-202ENST00000358355 RIMBP3BA6NNM3 1639 aa16.43■□□□□ 0.22
USP20-202ENST00000358355 RIMBP3Q9UFD9 1639 aa16.43■□□□□ 0.22
USP20-202ENST00000358355 PANK3Q9H999 370 aa16.43■□□□□ 0.22
USP20-202ENST00000358355 KCNJ4P48050 445 aa16.42■□□□□ 0.22
USP20-202ENST00000358355 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
USP20-202ENST00000358355 POGZQ7Z3K3 1410 aa16.42■□□□□ 0.22
USP20-202ENST00000358355 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
USP20-202ENST00000358355 PLCH2O75038 1416 aa16.42■□□□□ 0.22
USP20-202ENST00000358355 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
USP20-202ENST00000358355 USP47Q96K76 1375 aa16.41■□□□□ 0.22
USP20-202ENST00000358355 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
USP20-202ENST00000358355 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP20-202ENST00000358355 FGD1P98174 961 aa16.4■□□□□ 0.22
USP20-202ENST00000358355 MIA2Q96PC5 1412 aa16.4■□□□□ 0.22
USP20-202ENST00000358355 PDE3BQ13370 1112 aa16.4■□□□□ 0.22
USP20-202ENST00000358355 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.21
USP20-202ENST00000358355 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
USP20-202ENST00000358355 CCDC9Q9Y3X0 531 aaKnown RBP16.39■□□□□ 0.21
USP20-202ENST00000358355 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
USP20-202ENST00000358355 COG3Q96JB2 828 aa16.38■□□□□ 0.21
USP20-202ENST00000358355 LTV1Q96GA3 475 aaPredicted RBP16.38■□□□□ 0.21
USP20-202ENST00000358355 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
USP20-202ENST00000358355 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
USP20-202ENST00000358355 GPATCH8Q9UKJ3 1502 aaKnown RBP16.37■□□□□ 0.21
USP20-202ENST00000358355 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
USP20-202ENST00000358355 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
USP20-202ENST00000358355 ZNF330Q9Y3S2 320 aaPredicted RBP16.37■□□□□ 0.21
USP20-202ENST00000358355 SMC4Q9NTJ3 1288 aa16.35■□□□□ 0.21
USP20-202ENST00000358355 ZRSR1Q15695 479 aaKnown RBP16.35■□□□□ 0.21
USP20-202ENST00000358355 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
USP20-202ENST00000358355 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
USP20-202ENST00000358355 CAMSAP2Q08AD1 1489 aa16.34■□□□□ 0.21
USP20-202ENST00000358355 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
USP20-202ENST00000358355 KDM5BQ9UGL1 1544 aa16.33■□□□□ 0.21
USP20-202ENST00000358355 CCDC141Q6ZP82 1450 aa16.33■□□□□ 0.21
USP20-202ENST00000358355 PRKRIP1Q9H875 184 aaPredicted RBP16.33■□□□□ 0.2
USP20-202ENST00000358355 SAMD9Q5K651 1589 aa16.33■□□□□ 0.2
USP20-202ENST00000358355 CENPJQ9HC77 1338 aaPredicted RBP16.33■□□□□ 0.2
USP20-202ENST00000358355 UHRF1BP1LA0JNW5 1464 aa16.32■□□□□ 0.2
USP20-202ENST00000358355 TRAPPC8Q9Y2L5 1435 aa16.32■□□□□ 0.2
USP20-202ENST00000358355 DAPK1P53355 1430 aa16.31■□□□□ 0.2
USP20-202ENST00000358355 APBB1O00213 710 aa16.31■□□□□ 0.2
USP20-202ENST00000358355 MCCP23508 829 aa16.3■□□□□ 0.2
USP20-202ENST00000358355 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
USP20-202ENST00000358355 FBXO31Q5XUX0 539 aaPredicted RBP16.3■□□□□ 0.2
USP20-202ENST00000358355 CDK11BP21127 795 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms