RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 CFTRP13569 1480 aa13.04□□□□□ -0.32
SPTAN1-201ENST00000358161 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
SPTAN1-201ENST00000358161 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
SPTAN1-201ENST00000358161 ARHGAP5Q13017 1502 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 KIF21BO75037 1637 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 GLIPR1L2Q4G1C9 344 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 PDE3BQ13370 1112 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 GORABQ5T7V8 394 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
SPTAN1-201ENST00000358161 ST20-MTHFSA0A0A6YYL1 179 aa13.02□□□□□ -0.32
SPTAN1-201ENST00000358161 APBB1O00213 710 aa13.02□□□□□ -0.33
SPTAN1-201ENST00000358161 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
SPTAN1-201ENST00000358161 FGD6Q6ZV73 1430 aa13.02□□□□□ -0.33
SPTAN1-201ENST00000358161 MYBBP1AQ9BQG0 1328 aaKnown RBP13.02□□□□□ -0.33
SPTAN1-201ENST00000358161 CHMP3Q9Y3E7 222 aa13.01□□□□□ -0.33
SPTAN1-201ENST00000358161 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
SPTAN1-201ENST00000358161 NRDCO43847 1150 aa13.01□□□□□ -0.33
SPTAN1-201ENST00000358161 EVA1CP58658 441 aa13.01□□□□□ -0.33
SPTAN1-201ENST00000358161 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
SPTAN1-201ENST00000358161 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
SPTAN1-201ENST00000358161 PANK3Q9H999 370 aa13□□□□□ -0.33
SPTAN1-201ENST00000358161 USP47Q96K76 1375 aa13□□□□□ -0.33
SPTAN1-201ENST00000358161 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
SPTAN1-201ENST00000358161 CENPJQ9HC77 1338 aaPredicted RBP12.99□□□□□ -0.33
SPTAN1-201ENST00000358161 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
SPTAN1-201ENST00000358161 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
SPTAN1-201ENST00000358161 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
SPTAN1-201ENST00000358161 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
SPTAN1-201ENST00000358161 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
SPTAN1-201ENST00000358161 DNTTIP2Q5QJE6 756 aaKnown RBP12.98□□□□□ -0.33
SPTAN1-201ENST00000358161 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
SPTAN1-201ENST00000358161 G3V3G9 751 aa12.97□□□□□ -0.33
SPTAN1-201ENST00000358161 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
SPTAN1-201ENST00000358161 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
SPTAN1-201ENST00000358161 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
SPTAN1-201ENST00000358161 TOP2BQ02880 1626 aa12.96□□□□□ -0.34
SPTAN1-201ENST00000358161 PSME1Q06323 249 aa12.96□□□□□ -0.34
SPTAN1-201ENST00000358161 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.34
SPTAN1-201ENST00000358161 NCOA2Q15596 1464 aa12.95□□□□□ -0.34
SPTAN1-201ENST00000358161 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
SPTAN1-201ENST00000358161 NESP48681 1621 aa12.95□□□□□ -0.34
SPTAN1-201ENST00000358161 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-201ENST00000358161 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
SPTAN1-201ENST00000358161 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
SPTAN1-201ENST00000358161 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
SPTAN1-201ENST00000358161 PLEKHH2Q8IVE3 1493 aa12.94□□□□□ -0.34
SPTAN1-201ENST00000358161 HECW1Q76N89 1606 aa12.94□□□□□ -0.34
SPTAN1-201ENST00000358161 PTMSP20962 102 aa12.94□□□□□ -0.34
SPTAN1-201ENST00000358161 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
SPTAN1-201ENST00000358161 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
SPTAN1-201ENST00000358161 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-201ENST00000358161 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-201ENST00000358161 TEFQ10587 303 aa12.93□□□□□ -0.34
SPTAN1-201ENST00000358161 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-201ENST00000358161 ATF3P18847 181 aa12.92□□□□□ -0.34
SPTAN1-201ENST00000358161 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
SPTAN1-201ENST00000358161 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
SPTAN1-201ENST00000358161 ZNF644Q9H582 1327 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-201ENST00000358161 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
SPTAN1-201ENST00000358161 MEX3CQ5U5Q3 659 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-201ENST00000358161 E9PSI1 815 aa12.9□□□□□ -0.34
SPTAN1-201ENST00000358161 NGEFQ8N5V2 710 aa12.89□□□□□ -0.35
SPTAN1-201ENST00000358161 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-201ENST00000358161 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-201ENST00000358161 CLSTN1O94985 981 aa12.89□□□□□ -0.35
SPTAN1-201ENST00000358161 GBP4Q96PP9 640 aa12.89□□□□□ -0.35
SPTAN1-201ENST00000358161 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-201ENST00000358161 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
SPTAN1-201ENST00000358161 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
SPTAN1-201ENST00000358161 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-201ENST00000358161 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
SPTAN1-201ENST00000358161 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
SPTAN1-201ENST00000358161 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
SPTAN1-201ENST00000358161 HSP90B1P14625 803 aaKnown RBP12.86□□□□□ -0.35
SPTAN1-201ENST00000358161 CCDC34Q96HJ3 373 aa12.86□□□□□ -0.35
SPTAN1-201ENST00000358161 L1TD1Q5T7N2 865 aaKnown RBP12.85□□□□□ -0.35
SPTAN1-201ENST00000358161 PRKRIP1Q9H875 184 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-201ENST00000358161 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
SPTAN1-201ENST00000358161 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-201ENST00000358161 DRC7Q8IY82 874 aa12.84□□□□□ -0.35
SPTAN1-201ENST00000358161 MFAP1P55081 439 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-201ENST00000358161 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
SPTAN1-201ENST00000358161 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
SPTAN1-201ENST00000358161 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.36
SPTAN1-201ENST00000358161 CHAF1AQ13111 956 aaPredicted RBP12.83□□□□□ -0.36
SPTAN1-201ENST00000358161 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
SPTAN1-201ENST00000358161 C9orf84Q5VXU9 1444 aa12.83□□□□□ -0.36
SPTAN1-201ENST00000358161 CUL7Q14999 1698 aa12.83□□□□□ -0.36
SPTAN1-201ENST00000358161 ROCK1Q13464 1354 aa12.83□□□□□ -0.36
SPTAN1-201ENST00000358161 KIF3AQ9Y496 699 aa12.83□□□□□ -0.36
SPTAN1-201ENST00000358161 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
SPTAN1-201ENST00000358161 CHMP4CQ96CF2 233 aa12.82□□□□□ -0.36
SPTAN1-201ENST00000358161 HFM1A2PYH4 1435 aa12.82□□□□□ -0.36
SPTAN1-201ENST00000358161 GPRASP1Q5JY77 1395 aa12.82□□□□□ -0.36
SPTAN1-201ENST00000358161 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
SPTAN1-201ENST00000358161 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
SPTAN1-201ENST00000358161 MSH5O43196 834 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms